RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KIAA1210Q9ULL0 1709 aa14.74□□□□□ -0.05
PKP4-206ENST00000452162 KNDC1Q76NI1 1749 aa14.74□□□□□ -0.05
PKP4-206ENST00000452162 PTCH1Q13635 1447 aa14.74□□□□□ -0.05
PKP4-206ENST00000452162 UBAP1LF5GYI3 381 aa14.73□□□□□ -0.05
PKP4-206ENST00000452162 ABCC11Q96J66 1382 aa14.73□□□□□ -0.05
PKP4-206ENST00000452162 ST20-MTHFSA0A0A6YYL1 179 aa14.73□□□□□ -0.05
PKP4-206ENST00000452162 NBPF1Q3BBV0 1214 aa14.73□□□□□ -0.05
PKP4-206ENST00000452162 FBXO41Q8TF61 875 aa14.73□□□□□ -0.05
PKP4-206ENST00000452162 TECPR2O15040 1411 aa14.72□□□□□ -0.05
PKP4-206ENST00000452162 C14orf37Q86TY3 774 aa14.72□□□□□ -0.05
PKP4-206ENST00000452162 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.71□□□□□ -0.05
PKP4-206ENST00000452162 NCOA3Q9Y6Q9 1424 aa14.71□□□□□ -0.05
PKP4-206ENST00000452162 WAPLQ7Z5K2 1190 aa14.71□□□□□ -0.05
PKP4-206ENST00000452162 NALCNQ8IZF0 1738 aa14.71□□□□□ -0.05
PKP4-206ENST00000452162 MSH6P52701 1360 aa14.71□□□□□ -0.06
PKP4-206ENST00000452162 CCDC184Q52MB2 194 aa14.7□□□□□ -0.06
PKP4-206ENST00000452162 PLEKHH1Q9ULM0 1364 aa14.7□□□□□ -0.06
PKP4-206ENST00000452162 TRAK1Q9UPV9 953 aa14.7□□□□□ -0.06
PKP4-206ENST00000452162 TOM1O60784 492 aa14.69□□□□□ -0.06
PKP4-206ENST00000452162 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
PKP4-206ENST00000452162 ILDR1Q86SU0 546 aaPredicted RBP14.68□□□□□ -0.06
PKP4-206ENST00000452162 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
PKP4-206ENST00000452162 ADGRL3Q9HAR2 1447 aa14.67□□□□□ -0.06
PKP4-206ENST00000452162 PIP4K2BP78356 416 aa14.67□□□□□ -0.06
PKP4-206ENST00000452162 ARHGEF28Q8N1W1 1705 aaKnown RBP14.67□□□□□ -0.06
PKP4-206ENST00000452162 DLC1Q96QB1 1528 aa14.67□□□□□ -0.06
PKP4-206ENST00000452162 PRAM1Q96QH2 718 aa14.67□□□□□ -0.06
PKP4-206ENST00000452162 POLR3GLQ9BT43 218 aa14.67□□□□□ -0.06
PKP4-206ENST00000452162 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
PKP4-206ENST00000452162 SAFB2Q14151 953 aaKnown RBP eCLIP14.66□□□□□ -0.06
PKP4-206ENST00000452162 SIRT1Q96EB6 747 aa14.66□□□□□ -0.06
PKP4-206ENST00000452162 ATF3P18847 181 aa14.65□□□□□ -0.07
PKP4-206ENST00000452162 MRS2Q9HD23 443 aa14.65□□□□□ -0.07
PKP4-206ENST00000452162 HNRNPUQ00839 825 aaKnown RBP eCLIP14.64□□□□□ -0.07
PKP4-206ENST00000452162 POGKQ9P215 609 aa14.64□□□□□ -0.07
PKP4-206ENST00000452162 CADPS2Q86UW7 1296 aa14.63□□□□□ -0.07
PKP4-206ENST00000452162 DCCP43146 1447 aa14.63□□□□□ -0.07
PKP4-206ENST00000452162 TESK2Q96S53 571 aa14.63□□□□□ -0.07
PKP4-206ENST00000452162 SLAIN2Q9P270 581 aa14.63□□□□□ -0.07
PKP4-206ENST00000452162 ROBO1Q9Y6N7 1651 aa14.61□□□□□ -0.07
PKP4-206ENST00000452162 MST1RQ04912 1400 aa14.6□□□□□ -0.07
PKP4-206ENST00000452162 CDC42BPGQ6DT37 1551 aa14.6□□□□□ -0.07
PKP4-206ENST00000452162 DISP3Q9P2K9 1392 aa14.6□□□□□ -0.07
PKP4-206ENST00000452162 MINK1Q8N4C8 1332 aaPredicted RBP14.6□□□□□ -0.07
PKP4-206ENST00000452162 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
PKP4-206ENST00000452162 NUTM2FA1L443 756 aa14.58□□□□□ -0.08
PKP4-206ENST00000452162 FAM9BQ8IZU0 186 aa14.58□□□□□ -0.08
PKP4-206ENST00000452162 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
PKP4-206ENST00000452162 RGPD8O14715 1765 aaPredicted RBP14.58□□□□□ -0.08
PKP4-206ENST00000452162 ADGRB2O60241 1585 aa14.57□□□□□ -0.08
PKP4-206ENST00000452162 C1orf167Q5SNV9 1468 aa14.57□□□□□ -0.08
PKP4-206ENST00000452162 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
PKP4-206ENST00000452162 CENPJQ9HC77 1338 aaPredicted RBP14.56□□□□□ -0.08
PKP4-206ENST00000452162 HSPA1LP34931 641 aa14.55□□□□□ -0.08
PKP4-206ENST00000452162 BRINP3Q76B58 766 aa14.55□□□□□ -0.08
PKP4-206ENST00000452162 ORAI2Q96SN7 254 aa14.55□□□□□ -0.08
PKP4-206ENST00000452162 TMF1P82094 1093 aa14.54□□□□□ -0.08
PKP4-206ENST00000452162 ZBED9Q6R2W3 1325 aa14.54□□□□□ -0.08
PKP4-206ENST00000452162 RALBP1Q15311 655 aa14.54□□□□□ -0.08
PKP4-206ENST00000452162 WASLO00401 505 aaPredicted RBP14.53□□□□□ -0.08
PKP4-206ENST00000452162 PER1O15534 1290 aaPredicted RBP14.53□□□□□ -0.08
PKP4-206ENST00000452162 USP32Q8NFA0 1604 aa14.53□□□□□ -0.08
PKP4-206ENST00000452162 FKBP8Q14318 412 aa14.53□□□□□ -0.08
PKP4-206ENST00000452162 EIF3AQ14152 1382 aaKnown RBP14.53□□□□□ -0.08
PKP4-206ENST00000452162 PARD3Q8TEW0 1356 aa14.53□□□□□ -0.08
PKP4-206ENST00000452162 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.08
PKP4-206ENST00000452162 MYBBP1AQ9BQG0 1328 aaKnown RBP14.52□□□□□ -0.08
PKP4-206ENST00000452162 BRD4O60885 1362 aaPredicted RBP14.52□□□□□ -0.08
PKP4-206ENST00000452162 ESCO1Q5FWF5 840 aa14.52□□□□□ -0.09
PKP4-206ENST00000452162 DDX17Q92841 729 aaKnown RBP14.52□□□□□ -0.09
PKP4-206ENST00000452162 PHLPP1O60346 1717 aa14.51□□□□□ -0.09
PKP4-206ENST00000452162 CDK19Q9BWU1 502 aa14.51□□□□□ -0.09
PKP4-206ENST00000452162 PRR36Q9H6K5 1346 aa14.5□□□□□ -0.09
PKP4-206ENST00000452162 NEFLP07196 543 aa14.5□□□□□ -0.09
PKP4-206ENST00000452162 PNISRQ8TF01 805 aaKnown RBP14.5□□□□□ -0.09
PKP4-206ENST00000452162 NHSL1Q5SYE7 1610 aa14.5□□□□□ -0.09
PKP4-206ENST00000452162 TULP4Q9NRJ4 1543 aa14.5□□□□□ -0.09
PKP4-206ENST00000452162 AHDC1Q5TGY3 1603 aaPredicted RBP14.49□□□□□ -0.09
PKP4-206ENST00000452162 ANKARQ7Z5J8 1434 aa14.48□□□□□ -0.09
PKP4-206ENST00000452162 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
PKP4-206ENST00000452162 PANK3Q9H999 370 aa14.47□□□□□ -0.09
PKP4-206ENST00000452162 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
PKP4-206ENST00000452162 COL16A1Q07092 1604 aaPredicted RBP14.47□□□□□ -0.09
PKP4-206ENST00000452162 ATP7BP35670 1465 aa14.47□□□□□ -0.09
PKP4-206ENST00000452162 NUDT16Q96DE0 195 aaKnown RBP14.47□□□□□ -0.09
PKP4-206ENST00000452162 MYOM1P52179 1685 aa14.47□□□□□ -0.09
PKP4-206ENST00000452162 FOXO3O43524 673 aa14.46□□□□□ -0.09
PKP4-206ENST00000452162 SRPK2P78362 688 aaKnown RBP14.46□□□□□ -0.09
PKP4-206ENST00000452162 PHF8Q9UPP1 1060 aa14.46□□□□□ -0.09
PKP4-206ENST00000452162 KIF1AQ12756 1690 aa14.46□□□□□ -0.1
PKP4-206ENST00000452162 PMFBP1Q8TBY8 1022 aa14.46□□□□□ -0.1
PKP4-206ENST00000452162 SBNO2Q9Y2G9 1366 aa14.46□□□□□ -0.1
PKP4-206ENST00000452162 ITSN1Q15811 1721 aa14.45□□□□□ -0.1
PKP4-206ENST00000452162 EVC2Q86UK5 1308 aa14.45□□□□□ -0.1
PKP4-206ENST00000452162 XPCQ01831 940 aaPredicted RBP14.45□□□□□ -0.1
PKP4-206ENST00000452162 CDCA8Q53HL2 280 aa14.45□□□□□ -0.1
PKP4-206ENST00000452162 NLRP13Q86W25 1043 aa14.45□□□□□ -0.1
PKP4-206ENST00000452162 TOPAZ1Q8N9V7 1692 aa14.44□□□□□ -0.1
PKP4-206ENST00000452162 SOS2Q07890 1332 aaPredicted RBP14.43□□□□□ -0.1
PKP4-206ENST00000452162 NPHP3Q7Z494 1330 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms