RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
SMARCA2-214ENST00000450198 SYCP1Q15431 976 aa17.48■□□□□ 0.39
SMARCA2-214ENST00000450198 STAC3Q96MF2 364 aa17.48■□□□□ 0.39
SMARCA2-214ENST00000450198 NUTM2GQ5VZR2 741 aa17.47■□□□□ 0.39
SMARCA2-214ENST00000450198 PANK3Q9H999 370 aa17.47■□□□□ 0.39
SMARCA2-214ENST00000450198 DNAI2Q9GZS0 605 aa17.47■□□□□ 0.39
SMARCA2-214ENST00000450198 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.39
SMARCA2-214ENST00000450198 KRT18P05783 430 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-214ENST00000450198 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
SMARCA2-214ENST00000450198 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
SMARCA2-214ENST00000450198 RIPK4P57078 832 aa17.46■□□□□ 0.39
SMARCA2-214ENST00000450198 GOLGA6L3A6NEY3 463 aa17.46■□□□□ 0.39
SMARCA2-214ENST00000450198 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
SMARCA2-214ENST00000450198 BICD2Q8TD16 824 aa17.45■□□□□ 0.38
SMARCA2-214ENST00000450198 L3MBTL2Q969R5 705 aa17.45■□□□□ 0.38
SMARCA2-214ENST00000450198 DDX19BQ9UMR2 479 aa17.45■□□□□ 0.38
SMARCA2-214ENST00000450198 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
SMARCA2-214ENST00000450198 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
SMARCA2-214ENST00000450198 DESP17661 470 aa17.44■□□□□ 0.38
SMARCA2-214ENST00000450198 CABP4P57796 275 aa17.44■□□□□ 0.38
SMARCA2-214ENST00000450198 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
SMARCA2-214ENST00000450198 SPG7Q9UQ90 795 aa17.44■□□□□ 0.38
SMARCA2-214ENST00000450198 MYO6Q9UM54 1294 aa17.43■□□□□ 0.38
SMARCA2-214ENST00000450198 TXLNAP40222 546 aa17.43■□□□□ 0.38
SMARCA2-214ENST00000450198 RAPGEF2Q9Y4G8 1499 aa17.43■□□□□ 0.38
SMARCA2-214ENST00000450198 PPM1FP49593 454 aaPredicted RBP17.43■□□□□ 0.38
SMARCA2-214ENST00000450198 PRDM11Q9NQV5 511 aa17.42■□□□□ 0.38
SMARCA2-214ENST00000450198 VPS8Q8N3P4 1428 aa17.42■□□□□ 0.38
SMARCA2-214ENST00000450198 UBTFL1P0CB47 393 aaPredicted RBP17.42■□□□□ 0.38
SMARCA2-214ENST00000450198 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
SMARCA2-214ENST00000450198 MYBBP1AQ9BQG0 1328 aaKnown RBP17.42■□□□□ 0.38
SMARCA2-214ENST00000450198 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
SMARCA2-214ENST00000450198 PDCL3Q9H2J4 239 aa17.41■□□□□ 0.38
SMARCA2-214ENST00000450198 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
SMARCA2-214ENST00000450198 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.41■□□□□ 0.387e-7■■■■■ 31.5
SMARCA2-214ENST00000450198 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
SMARCA2-214ENST00000450198 TTLL12Q14166 644 aaPredicted RBP17.4■□□□□ 0.38
SMARCA2-214ENST00000450198 NACAP1Q9BZK3 213 aa17.4■□□□□ 0.38
SMARCA2-214ENST00000450198 PATL2C9JE40 543 aaKnown RBP17.4■□□□□ 0.38
SMARCA2-214ENST00000450198 NEBLO76041 1014 aa17.4■□□□□ 0.38
SMARCA2-214ENST00000450198 RUFY1Q96T51 708 aa17.39■□□□□ 0.37
SMARCA2-214ENST00000450198 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.37
SMARCA2-214ENST00000450198 MPHOSPH8Q99549 860 aa17.39■□□□□ 0.37
SMARCA2-214ENST00000450198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
SMARCA2-214ENST00000450198 OLFM4Q6UX06 510 aa17.39■□□□□ 0.37
SMARCA2-214ENST00000450198 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
SMARCA2-214ENST00000450198 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 PSMA5P28066 241 aa17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 TTC39AQ5SRH9 613 aa17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 BCL2L13Q9BXK5 485 aa17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
SMARCA2-214ENST00000450198 FHOD3Q2V2M9 1422 aa17.37■□□□□ 0.37
SMARCA2-214ENST00000450198 SOGA3Q5TF21 947 aa17.37■□□□□ 0.37
SMARCA2-214ENST00000450198 CCDC97Q96F63 343 aaPredicted RBP17.37■□□□□ 0.37
SMARCA2-214ENST00000450198 SKOR2Q2VWA4 1001 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-214ENST00000450198 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-214ENST00000450198 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
SMARCA2-214ENST00000450198 ZRSR2Q15696 482 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-214ENST00000450198 PNISRQ8TF01 805 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-214ENST00000450198 AK7Q96M32 723 aa17.35■□□□□ 0.37
SMARCA2-214ENST00000450198 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
SMARCA2-214ENST00000450198 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
SMARCA2-214ENST00000450198 HIP1O00291 1037 aa17.35■□□□□ 0.37
SMARCA2-214ENST00000450198 VPS37CA5D8V6 355 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 ERC1Q8IUD2 1116 aa17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 SASS6Q6UVJ0 657 aa17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 HOMER1Q86YM7 354 aa17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 PIP4K2AP48426 406 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 FOXD4L6Q3SYB3 417 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 FOXD4L3Q6VB84 417 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 GNAI3P08754 354 aa17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 MAGEC2Q9UBF1 373 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 ZNF652Q9Y2D9 606 aa17.34■□□□□ 0.37
SMARCA2-214ENST00000450198 IBSPP21815 317 aaPredicted RBP17.33■□□□□ 0.37
SMARCA2-214ENST00000450198 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.36
SMARCA2-214ENST00000450198 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.36
SMARCA2-214ENST00000450198 CNTROBQ8N137 903 aa17.33■□□□□ 0.36
SMARCA2-214ENST00000450198 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.36
SMARCA2-214ENST00000450198 DZIP1LQ8IYY4 767 aaKnown RBP17.33■□□□□ 0.36
SMARCA2-214ENST00000450198 HMOX1P09601 288 aa17.32■□□□□ 0.36
SMARCA2-214ENST00000450198 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
SMARCA2-214ENST00000450198 ZPR1O75312 459 aa17.32■□□□□ 0.36
SMARCA2-214ENST00000450198 CENPQQ7L2Z9 268 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-214ENST00000450198 SCLT1Q96NL6 688 aa17.32■□□□□ 0.36
SMARCA2-214ENST00000450198 NAT10Q9H0A0 1025 aaKnown RBP17.31■□□□□ 0.36
SMARCA2-214ENST00000450198 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
SMARCA2-214ENST00000450198 DNAJC2Q99543 621 aaKnown RBP17.31■□□□□ 0.36
SMARCA2-214ENST00000450198 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMARCA2-214ENST00000450198 TNIP1Q15025 636 aa17.3■□□□□ 0.36
SMARCA2-214ENST00000450198 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
SMARCA2-214ENST00000450198 ZNF76P36508 570 aa17.3■□□□□ 0.36
SMARCA2-214ENST00000450198 PPP4R3AQ6IN85 833 aa17.3■□□□□ 0.36
SMARCA2-214ENST00000450198 FOSBP53539 338 aa17.29■□□□□ 0.36
SMARCA2-214ENST00000450198 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
SMARCA2-214ENST00000450198 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms