RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 BECN2A8MW95 431 aa15.51■□□□□ 0.07
AC006001.3-201ENST00000449307 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
AC006001.3-201ENST00000449307 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 TBC1D2BQ9UPU7 963 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 EPS15P42566 896 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 SAFBQ15424 915 aaKnown RBP eCLIP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 RRP12Q5JTH9 1297 aaKnown RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 RNF20Q5VTR2 975 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 MYBBP1AQ9BQG0 1328 aaKnown RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
AC006001.3-201ENST00000449307 PRDM11Q9NQV5 511 aa15.49■□□□□ 0.07
AC006001.3-201ENST00000449307 BRMS1Q9HCU9 246 aa15.49■□□□□ 0.07
AC006001.3-201ENST00000449307 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 DNAJC2Q99543 621 aaKnown RBP15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 APAF1O14727 1248 aa15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 SLC3A2P08195 630 aaKnown RBP15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 NAP1L1P55209 391 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 CHMP4BP1P59074 171 aa15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 MPHOSPH10O00566 681 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 HOOK1Q9UJC3 728 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 E9PSI1 815 aa15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 TTC39AQ5SRH9 613 aa15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 GNL3LQ9NVN8 582 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 COG6Q9Y2V7 657 aa15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 ROCK1Q13464 1354 aa15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 ERC2O15083 957 aa15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 UBTFL1P0CB47 393 aaPredicted RBP15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 PATL2C9JE40 543 aaKnown RBP15.46■□□□□ 0.06
AC006001.3-201ENST00000449307 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.06
AC006001.3-201ENST00000449307 IPO7O95373 1038 aaKnown RBP15.45■□□□□ 0.06
AC006001.3-201ENST00000449307 MYL6BP14649 208 aa15.45■□□□□ 0.06
AC006001.3-201ENST00000449307 SLC26A8Q96RN1 970 aa15.45■□□□□ 0.06
AC006001.3-201ENST00000449307 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 ATP6V1DQ9Y5K8 247 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 HSP90AB4PQ58FF6 505 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 CCDC70Q6NSX1 233 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 ZNF219Q9P2Y4 722 aaPredicted RBP15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 SPG7Q9UQ90 795 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 XBP1P17861 261 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 GNAI1P63096 354 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 PRAM1Q96QH2 718 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 CDK5RAP3Q96JB5 506 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 WDHD1O75717 1129 aaPredicted RBP15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 POGZQ7Z3K3 1410 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 NGLY1Q96IV0 654 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 PPM1FP49593 454 aaPredicted RBP15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 USP47Q96K76 1375 aa15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 VPS37CA5D8V6 355 aaPredicted RBP15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 GRM1Q13255 1194 aa15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 MTHFSP49914 203 aa15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 ZC3H6P61129 1189 aaKnown RBP15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 HSP90AB2PQ58FF8 381 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 FSD1Q9BTV5 496 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 KRT18P05783 430 aaKnown RBP15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 GAS2L2Q8NHY3 880 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 CCDC30Q5VVM6 783 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 RUNDC1Q96C34 613 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 DDX19BQ9UMR2 479 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 GOLGA6L3A6NEY3 463 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 REC8O95072 547 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 ATP2B1P20020 1258 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 CCDC158Q5M9N0 1113 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 VSIG10Q8N0Z9 540 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 ZPR1O75312 459 aa15.38■□□□□ 0.05
AC006001.3-201ENST00000449307 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
AC006001.3-201ENST00000449307 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
AC006001.3-201ENST00000449307 OFD1O75665 1012 aa15.37■□□□□ 0.05
AC006001.3-201ENST00000449307 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 TMOD2Q9NZR1 351 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 CRBNQ96SW2 442 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 SIL1Q9H173 461 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 PRG4Q92954 1404 aaPredicted RBP15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 TMEM87AQ8NBN3 555 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 WDR78Q5VTH9 848 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 SMC3Q9UQE7 1217 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 ZNF592Q92610 1267 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 CDK19Q9BWU1 502 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 NINLQ9Y2I6 1382 aa15.35■□□□□ 0.05
AC006001.3-201ENST00000449307 ZHX3Q9H4I2 956 aa15.35■□□□□ 0.05
AC006001.3-201ENST00000449307 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
AC006001.3-201ENST00000449307 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
AC006001.3-201ENST00000449307 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.05
AC006001.3-201ENST00000449307 DDX49Q9Y6V7 483 aaKnown RBP15.33■□□□□ 0.05
AC006001.3-201ENST00000449307 CCDC57Q2TAC2 916 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms