RNA–Protein interactions for RNA: ENST00000449228.5

BBC3-204, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-204ENST00000449228 KNDC1Q76NI1 1749 aa33.85■■■■□ 3.01
BBC3-204ENST00000449228 SRPK2P78362 688 aaKnown RBP33.85■■■■□ 3.01
BBC3-204ENST00000449228 ZNF142P52746 1687 aaPredicted RBP33.84■■■■□ 3.01
BBC3-204ENST00000449228 FAM135BQ49AJ0 1406 aa33.84■■■■□ 3.01
BBC3-204ENST00000449228 BRD4O60885 1362 aaPredicted RBP33.84■■■■□ 3.01
BBC3-204ENST00000449228 NPC1L1Q9UHC9 1359 aa33.84■■■■□ 3.01
BBC3-204ENST00000449228 CABP2Q9NPB3 220 aa33.83■■■■□ 3.01
BBC3-204ENST00000449228 SETD1BQ9UPS6 1966 aaKnown RBP33.83■■■■□ 3.01
BBC3-204ENST00000449228 MED14O60244 1454 aa33.82■■■■□ 3.01
BBC3-204ENST00000449228 NINLQ9Y2I6 1382 aa33.82■■■■□ 3.01
BBC3-204ENST00000449228 AMER1Q5JTC6 1135 aaPredicted RBP33.82■■■■□ 3
BBC3-204ENST00000449228 WAPLQ7Z5K2 1190 aa33.82■■■■□ 3
BBC3-204ENST00000449228 ATAD2Q6PL18 1390 aa33.82■■■■□ 3
BBC3-204ENST00000449228 NLRP13Q86W25 1043 aa33.81■■■■□ 3
BBC3-204ENST00000449228 SLC12A5Q9H2X9 1139 aa33.81■■■■□ 3
BBC3-204ENST00000449228 TBX22Q9Y458 520 aa33.81■■■■□ 3
BBC3-204ENST00000449228 FAM9BQ8IZU0 186 aa33.8■■■■□ 3
BBC3-204ENST00000449228 CPS1P31327 1500 aa33.8■■■■□ 3
BBC3-204ENST00000449228 DIP2AQ14689 1571 aa33.79■■■■□ 3
BBC3-204ENST00000449228 SLC26A8Q96RN1 970 aa33.79■■■■□ 3
BBC3-204ENST00000449228 PLEKHH1Q9ULM0 1364 aa33.78■■■■□ 3
BBC3-204ENST00000449228 CDK19Q9BWU1 502 aa33.76■■■■□ 3
BBC3-204ENST00000449228 ANKLE2Q86XL3 938 aa33.76■■■□□ 2.99
BBC3-204ENST00000449228 CARD14Q9BXL6 1004 aa33.76■■■□□ 2.99
BBC3-204ENST00000449228 ANKRD36BQ8N2N9 1353 aa33.74■■■□□ 2.99
BBC3-204ENST00000449228 NSD3Q9BZ95 1437 aa33.7■■■□□ 2.99
BBC3-204ENST00000449228 HNRNPUQ00839 825 aaKnown RBP eCLIP33.7■■■□□ 2.99
BBC3-204ENST00000449228 ROBO2Q9HCK4 1378 aa33.68■■■□□ 2.98
BBC3-204ENST00000449228 PNISRQ8TF01 805 aaKnown RBP33.67■■■□□ 2.98
BBC3-204ENST00000449228 WASLO00401 505 aaPredicted RBP33.67■■■□□ 2.98
BBC3-204ENST00000449228 TERF2IPQ9NYB0 399 aa33.66■■■□□ 2.98
BBC3-204ENST00000449228 AMOTL2Q9Y2J4 779 aa33.66■■■□□ 2.98
BBC3-204ENST00000449228 PTPRUQ92729 1446 aa33.65■■■□□ 2.98
BBC3-204ENST00000449228 PIK3R4Q99570 1358 aa33.64■■■□□ 2.98
BBC3-204ENST00000449228 CGNL1Q0VF96 1302 aa33.63■■■□□ 2.97
BBC3-204ENST00000449228 USP32Q8NFA0 1604 aa33.62■■■□□ 2.97
BBC3-204ENST00000449228 PPP2R1AP30153 589 aa33.62■■■□□ 2.97
BBC3-204ENST00000449228 PTCH1Q13635 1447 aa33.61■■■□□ 2.97
BBC3-204ENST00000449228 HDGFL2Q7Z4V5 671 aaPredicted RBP33.6■■■□□ 2.97
BBC3-204ENST00000449228 A0A1W2PP64 1363 aa33.6■■■□□ 2.97
BBC3-204ENST00000449228 NSD2O96028 1365 aa33.57■■■□□ 2.96
BBC3-204ENST00000449228 CABP1Q9NZU7 370 aa33.57■■■□□ 2.96
BBC3-204ENST00000449228 ADGRB2O60241 1585 aa33.55■■■□□ 2.96
BBC3-204ENST00000449228 MORC1Q86VD1 984 aa33.53■■■□□ 2.96
BBC3-204ENST00000449228 ATP7BP35670 1465 aa33.53■■■□□ 2.96
BBC3-204ENST00000449228 XRN1Q8IZH2 1706 aaKnown RBP33.52■■■□□ 2.96
BBC3-204ENST00000449228 CD163L1Q9NR16 1453 aa33.52■■■□□ 2.96
BBC3-204ENST00000449228 NUDT16Q96DE0 195 aaKnown RBP33.51■■■□□ 2.96
BBC3-204ENST00000449228 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.5■■■□□ 2.95
BBC3-204ENST00000449228 CCDC61Q9Y6R9 512 aa33.5■■■□□ 2.95
BBC3-204ENST00000449228 NPHP4O75161 1426 aaPredicted RBP33.5■■■□□ 2.95
BBC3-204ENST00000449228 PPIP5K1Q6PFW1 1433 aa33.49■■■□□ 2.95
BBC3-204ENST00000449228 ZBED9Q6R2W3 1325 aa33.48■■■□□ 2.95
BBC3-204ENST00000449228 KCNA6P17658 529 aa33.46■■■□□ 2.95
BBC3-204ENST00000449228 INSRP06213 1382 aa33.43■■■□□ 2.94
BBC3-204ENST00000449228 GTF3C3Q9Y5Q9 886 aa33.41■■■□□ 2.94
BBC3-204ENST00000449228 CHD2O14647 1828 aaKnown RBP33.4■■■□□ 2.94
BBC3-204ENST00000449228 NCKAP5LQ9HCH0 1330 aa33.4■■■□□ 2.94
BBC3-204ENST00000449228 WDR43Q15061 677 aaKnown RBP eCLIP33.39■■■□□ 2.942e-6■■■□□ 15.7
BBC3-204ENST00000449228 CPSF1Q10570 1443 aaKnown RBP33.39■■■□□ 2.94
BBC3-204ENST00000449228 CDC42BPGQ6DT37 1551 aa33.38■■■□□ 2.93
BBC3-204ENST00000449228 PRR36Q9H6K5 1346 aa33.38■■■□□ 2.93
BBC3-204ENST00000449228 SCAF1Q9H7N4 1312 aaKnown RBP33.37■■■□□ 2.93
BBC3-204ENST00000449228 ZNF692Q9BU19 519 aaPredicted RBP33.37■■■□□ 2.93
BBC3-204ENST00000449228 FYB1O15117 783 aa33.36■■■□□ 2.93
BBC3-204ENST00000449228 TNNT2P45379 298 aaPredicted RBP33.36■■■□□ 2.93
BBC3-204ENST00000449228 EDC4Q6P2E9 1401 aaKnown RBP33.35■■■□□ 2.93
BBC3-204ENST00000449228 GGNBP2Q9H3C7 697 aa33.34■■■□□ 2.93
BBC3-204ENST00000449228 POLR3AO14802 1390 aaPredicted RBP33.34■■■□□ 2.93
BBC3-204ENST00000449228 KDM4FA0A1W2PPD8 638 aa33.32■■■□□ 2.93
BBC3-204ENST00000449228 ANKRD26Q9UPS8 1709 aa33.31■■■□□ 2.92
BBC3-204ENST00000449228 PLEKHG3A1L390 1219 aa33.3■■■□□ 2.92
BBC3-204ENST00000449228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.3■■■□□ 2.92
BBC3-204ENST00000449228 TOPAZ1Q8N9V7 1692 aa33.3■■■□□ 2.92
BBC3-204ENST00000449228 BLMP54132 1417 aaPredicted RBP33.29■■■□□ 2.92
BBC3-204ENST00000449228 KIF20BQ96Q89 1820 aa33.29■■■□□ 2.92
BBC3-204ENST00000449228 ITSN1Q15811 1721 aa33.29■■■□□ 2.92
BBC3-204ENST00000449228 NUTM2FA1L443 756 aa33.29■■■□□ 2.92
BBC3-204ENST00000449228 ADAMTS8Q9UP79 889 aa33.29■■■□□ 2.92
BBC3-204ENST00000449228 CFAP53Q96M91 514 aa33.28■■■□□ 2.92
BBC3-204ENST00000449228 MTHFSP49914 203 aa33.26■■■□□ 2.92
BBC3-204ENST00000449228 AKAP12Q02952 1782 aa33.26■■■□□ 2.92
BBC3-204ENST00000449228 MON2Q7Z3U7 1717 aa33.26■■■□□ 2.91
BBC3-204ENST00000449228 ANKARQ7Z5J8 1434 aa33.25■■■□□ 2.91
BBC3-204ENST00000449228 ACEP12821 1306 aa33.24■■■□□ 2.91
BBC3-204ENST00000449228 NWD1Q149M9 1564 aa33.22■■■□□ 2.91
BBC3-204ENST00000449228 FMN2Q9NZ56 1722 aa33.18■■■□□ 2.9
BBC3-204ENST00000449228 NKTRP30414 1462 aaKnown RBP33.18■■■□□ 2.9
BBC3-204ENST00000449228 ADGRL3Q9HAR2 1447 aa33.17■■■□□ 2.9
BBC3-204ENST00000449228 NALCNQ8IZF0 1738 aa33.17■■■□□ 2.9
BBC3-204ENST00000449228 USP6P35125 1406 aa33.15■■■□□ 2.9
BBC3-204ENST00000449228 HSPA2P54652 639 aa33.15■■■□□ 2.9
BBC3-204ENST00000449228 NME9Q86XW9 330 aa33.15■■■□□ 2.9
BBC3-204ENST00000449228 NGDNQ8NEJ9 315 aaKnown RBP33.15■■■□□ 2.9
BBC3-204ENST00000449228 COG3Q96JB2 828 aa33.15■■■□□ 2.9
BBC3-204ENST00000449228 C14orf37Q86TY3 774 aa33.14■■■□□ 2.9
BBC3-204ENST00000449228 TTC21BQ7Z4L5 1316 aa33.14■■■□□ 2.9
BBC3-204ENST00000449228 PMFBP1Q8TBY8 1022 aa33.14■■■□□ 2.9
BBC3-204ENST00000449228 SENP3-EIF4A1A0A087X0R7 540 aa33.13■■■□□ 2.89
BBC3-204ENST00000449228 PROSER2Q86WR7 435 aaPredicted RBP33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms