RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 NGEFQ8N5V2 710 aa25.95■■□□□ 1.74
SMARCD2-203ENST00000448276 CHMP5Q9NZZ3 219 aa25.94■■□□□ 1.74
SMARCD2-203ENST00000448276 ADGRF5Q8IZF2 1346 aa25.94■■□□□ 1.74
SMARCD2-203ENST00000448276 SPAG9O60271 1321 aaKnown RBP25.93■■□□□ 1.74
SMARCD2-203ENST00000448276 UHRF1BP1LA0JNW5 1464 aa25.93■■□□□ 1.74
SMARCD2-203ENST00000448276 POLR3AO14802 1390 aaPredicted RBP25.93■■□□□ 1.74
SMARCD2-203ENST00000448276 CEP152O94986 1710 aa25.92■■□□□ 1.74
SMARCD2-203ENST00000448276 CLCN1P35523 988 aa25.92■■□□□ 1.74
SMARCD2-203ENST00000448276 MVPQ14764 893 aaKnown RBP25.91■■□□□ 1.74
SMARCD2-203ENST00000448276 RTEL1-TNFRSF6BF6WH68 1400 aa25.91■■□□□ 1.74
SMARCD2-203ENST00000448276 SLC12A5Q9H2X9 1139 aa25.91■■□□□ 1.74
SMARCD2-203ENST00000448276 SPHKAPQ2M3C7 1700 aa25.91■■□□□ 1.74
SMARCD2-203ENST00000448276 CLTCL1P53675 1640 aa25.9■■□□□ 1.74
SMARCD2-203ENST00000448276 FTSJ3Q8IY81 847 aaKnown RBP25.9■■□□□ 1.74
SMARCD2-203ENST00000448276 TSR2Q969E8 191 aaKnown RBP25.9■■□□□ 1.74
SMARCD2-203ENST00000448276 MTHFSP49914 203 aa25.88■■□□□ 1.73
SMARCD2-203ENST00000448276 NSD3Q9BZ95 1437 aa25.88■■□□□ 1.73
SMARCD2-203ENST00000448276 ERBB4Q15303 1308 aa25.87■■□□□ 1.73
SMARCD2-203ENST00000448276 GRPEL1Q9HAV7 217 aa25.87■■□□□ 1.73
SMARCD2-203ENST00000448276 WDR63Q8IWG1 891 aa25.87■■□□□ 1.73
SMARCD2-203ENST00000448276 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
SMARCD2-203ENST00000448276 DZIP1LQ8IYY4 767 aaKnown RBP25.86■■□□□ 1.73
SMARCD2-203ENST00000448276 MRE11P49959 708 aa25.86■■□□□ 1.73
SMARCD2-203ENST00000448276 ZNF692Q9BU19 519 aaPredicted RBP25.86■■□□□ 1.73
SMARCD2-203ENST00000448276 TRPM2O94759 1503 aa25.85■■□□□ 1.73
SMARCD2-203ENST00000448276 ABCC1P33527 1531 aa25.85■■□□□ 1.73
SMARCD2-203ENST00000448276 ZKSCAN2Q63HK3 967 aa25.85■■□□□ 1.73
SMARCD2-203ENST00000448276 HSCBQ8IWL3 235 aa25.85■■□□□ 1.73
SMARCD2-203ENST00000448276 AAMPQ13685 434 aa25.84■■□□□ 1.73
SMARCD2-203ENST00000448276 MYH16Q9H6N6 1097 aa25.83■■□□□ 1.73
SMARCD2-203ENST00000448276 SHPRHQ149N8 1683 aa25.83■■□□□ 1.73
SMARCD2-203ENST00000448276 ITPRIPQ8IWB1 547 aa25.83■■□□□ 1.73
SMARCD2-203ENST00000448276 IQSEC2Q5JU85 1478 aa25.82■■□□□ 1.72
SMARCD2-203ENST00000448276 FOXD4L1Q9NU39 408 aa25.82■■□□□ 1.72
SMARCD2-203ENST00000448276 TRAK1Q9UPV9 953 aa25.82■■□□□ 1.72
SMARCD2-203ENST00000448276 HSP90AA1P07900 732 aaKnown RBP25.82■■□□□ 1.72
SMARCD2-203ENST00000448276 UGGT1Q9NYU2 1555 aa25.82■■□□□ 1.72
SMARCD2-203ENST00000448276 ZMYM3Q14202 1370 aa25.81■■□□□ 1.72
SMARCD2-203ENST00000448276 GAS2L3Q86XJ1 694 aa25.81■■□□□ 1.72
SMARCD2-203ENST00000448276 SMC4Q9NTJ3 1288 aa25.81■■□□□ 1.72
SMARCD2-203ENST00000448276 U2AF1L5P0DN76 240 aaPredicted RBP25.81■■□□□ 1.72
SMARCD2-203ENST00000448276 U2AF1Q01081 240 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMARCD2-203ENST00000448276 PTPRTO14522 1441 aa25.8■■□□□ 1.72
SMARCD2-203ENST00000448276 TRIM27P14373 513 aa25.8■■□□□ 1.72
SMARCD2-203ENST00000448276 HSP90AA2PQ14568 343 aaPredicted RBP25.79■■□□□ 1.72
SMARCD2-203ENST00000448276 VSIG10Q8N0Z9 540 aa25.79■■□□□ 1.72
SMARCD2-203ENST00000448276 EXOSC9Q06265 439 aaKnown RBP25.79■■□□□ 1.72
SMARCD2-203ENST00000448276 ESPNB1AK53 854 aa25.79■■□□□ 1.72
SMARCD2-203ENST00000448276 STAC3Q96MF2 364 aa25.79■■□□□ 1.72
SMARCD2-203ENST00000448276 TNPO1Q92973 898 aaKnown RBP25.78■■□□□ 1.72
SMARCD2-203ENST00000448276 DDX11L8A8MPP1 907 aa25.76■■□□□ 1.71
SMARCD2-203ENST00000448276 SSH1Q8WYL5 1049 aa25.76■■□□□ 1.71
SMARCD2-203ENST00000448276 KIF3BO15066 747 aa25.76■■□□□ 1.71
SMARCD2-203ENST00000448276 CHGAP10645 457 aaKnown RBP25.75■■□□□ 1.71
SMARCD2-203ENST00000448276 FANCAO15360 1455 aa25.75■■□□□ 1.71
SMARCD2-203ENST00000448276 LNPKQ9C0E8 428 aa25.74■■□□□ 1.71
SMARCD2-203ENST00000448276 ABCA6Q8N139 1617 aa25.74■■□□□ 1.71
SMARCD2-203ENST00000448276 NOB1Q9ULX3 412 aaKnown RBP25.74■■□□□ 1.71
SMARCD2-203ENST00000448276 TMEM132EQ6IEE7 984 aa25.73■■□□□ 1.71
SMARCD2-203ENST00000448276 DDIT3P35638 169 aa25.73■■□□□ 1.71
SMARCD2-203ENST00000448276 CCDC27Q2M243 656 aa25.73■■□□□ 1.71
SMARCD2-203ENST00000448276 TMEM57Q8N5G2 664 aa25.72■■□□□ 1.71
SMARCD2-203ENST00000448276 PKNOX2Q96KN3 472 aa25.72■■□□□ 1.71
SMARCD2-203ENST00000448276 CFAP53Q96M91 514 aa25.72■■□□□ 1.71
SMARCD2-203ENST00000448276 HDAC1Q13547 482 aaPredicted RBP25.72■■□□□ 1.71
SMARCD2-203ENST00000448276 CD2BP2O95400 341 aaKnown RBP25.71■■□□□ 1.71
SMARCD2-203ENST00000448276 HSP90AB1P08238 724 aaKnown RBP25.71■■□□□ 1.71
SMARCD2-203ENST00000448276 GLIPR1L2Q4G1C9 344 aa25.71■■□□□ 1.71
SMARCD2-203ENST00000448276 TRIM44Q96DX7 344 aaPredicted RBP25.7■■□□□ 1.7
SMARCD2-203ENST00000448276 ZNF518AQ6AHZ1 1483 aa25.7■■□□□ 1.7
SMARCD2-203ENST00000448276 ZFYVE16Q7Z3T8 1539 aa25.7■■□□□ 1.7
SMARCD2-203ENST00000448276 U2SURPO15042 1029 aaKnown RBP25.69■■□□□ 1.7
SMARCD2-203ENST00000448276 SLC24A1O60721 1099 aa25.69■■□□□ 1.7
SMARCD2-203ENST00000448276 ATF7IPQ6VMQ6 1270 aa25.69■■□□□ 1.7
SMARCD2-203ENST00000448276 SMC5Q8IY18 1101 aa25.69■■□□□ 1.7
SMARCD2-203ENST00000448276 ZMYND15Q9H091 742 aa25.69■■□□□ 1.7
SMARCD2-203ENST00000448276 DDX19BQ9UMR2 479 aa25.69■■□□□ 1.7
SMARCD2-203ENST00000448276 MAP3K4Q9Y6R4 1608 aa25.68■■□□□ 1.7
SMARCD2-203ENST00000448276 ASXL2Q76L83 1435 aa25.68■■□□□ 1.7
SMARCD2-203ENST00000448276 RBM42Q9BTD8 480 aaKnown RBP25.67■■□□□ 1.7
SMARCD2-203ENST00000448276 KANK1Q14678 1352 aa25.67■■□□□ 1.7
SMARCD2-203ENST00000448276 ADGRL1O94910 1474 aa25.67■■□□□ 1.7
SMARCD2-203ENST00000448276 NPM1P06748 294 aaKnown RBP eCLIP25.66■■□□□ 1.7
SMARCD2-203ENST00000448276 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
SMARCD2-203ENST00000448276 NCOA3Q9Y6Q9 1424 aa25.66■■□□□ 1.7
SMARCD2-203ENST00000448276 RBM25P49756 843 aaKnown RBP25.66■■□□□ 1.7
SMARCD2-203ENST00000448276 RRP9O43818 475 aaKnown RBP25.65■■□□□ 1.7
SMARCD2-203ENST00000448276 KIAA1210Q9ULL0 1709 aa25.65■■□□□ 1.7
SMARCD2-203ENST00000448276 ARAP3Q8WWN8 1544 aa25.64■■□□□ 1.7
SMARCD2-203ENST00000448276 ZBTB40Q9NUA8 1239 aa25.64■■□□□ 1.7
SMARCD2-203ENST00000448276 KIF2CQ99661 725 aa25.64■■□□□ 1.69
SMARCD2-203ENST00000448276 TRIM35Q9UPQ4 493 aa25.64■■□□□ 1.69
SMARCD2-203ENST00000448276 RAB3GAP1Q15042 981 aa25.63■■□□□ 1.69
SMARCD2-203ENST00000448276 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
SMARCD2-203ENST00000448276 SNX21Q969T3 373 aa25.63■■□□□ 1.69
SMARCD2-203ENST00000448276 NOS1P29475 1434 aa25.62■■□□□ 1.69
SMARCD2-203ENST00000448276 ATP7AQ04656 1500 aa25.62■■□□□ 1.69
SMARCD2-203ENST00000448276 NUCB1Q02818 461 aa25.62■■□□□ 1.69
SMARCD2-203ENST00000448276 GBP4Q96PP9 640 aa25.62■■□□□ 1.69
SMARCD2-203ENST00000448276 TMPOP42166 694 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms