RNA–Protein interactions for RNA: ENST00000448152.2

GAPDHP16-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 16, humanhuman

BASIC

Gene GAPDHP16, Length 962 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP16-201ENST00000448152 MED1Q15648 1581 aaPredicted RBP10.59□□□□□ -0.71
GAPDHP16-201ENST00000448152 DDX12PQ92771 950 aa10.58□□□□□ -0.72
GAPDHP16-201ENST00000448152 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
GAPDHP16-201ENST00000448152 FAM9AQ8IZU1 332 aaPredicted RBP10.57□□□□□ -0.72
GAPDHP16-201ENST00000448152 SETD1BQ9UPS6 1966 aaKnown RBP10.56□□□□□ -0.72
GAPDHP16-201ENST00000448152 RAPGEF6Q8TEU7 1601 aa10.56□□□□□ -0.72
GAPDHP16-201ENST00000448152 NBR1Q14596 966 aa10.56□□□□□ -0.72
GAPDHP16-201ENST00000448152 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
GAPDHP16-201ENST00000448152 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
GAPDHP16-201ENST00000448152 CEP162Q5TB80 1403 aa10.55□□□□□ -0.72
GAPDHP16-201ENST00000448152 UBAP1LF5GYI3 381 aa10.54□□□□□ -0.72
GAPDHP16-201ENST00000448152 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
GAPDHP16-201ENST00000448152 NCOA1Q15788 1441 aa10.54□□□□□ -0.72
GAPDHP16-201ENST00000448152 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
GAPDHP16-201ENST00000448152 ZBED2Q9BTP6 218 aa10.54□□□□□ -0.72
GAPDHP16-201ENST00000448152 ATP10AO60312 1499 aa10.54□□□□□ -0.72
GAPDHP16-201ENST00000448152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.53□□□□□ -0.72
GAPDHP16-201ENST00000448152 MAP3K7O43318 606 aa10.53□□□□□ -0.72
GAPDHP16-201ENST00000448152 HRO43593 1189 aa10.53□□□□□ -0.72
GAPDHP16-201ENST00000448152 C6orf132Q5T0Z8 1188 aa10.53□□□□□ -0.72
GAPDHP16-201ENST00000448152 C3P01024 1663 aa10.53□□□□□ -0.72
GAPDHP16-201ENST00000448152 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
GAPDHP16-201ENST00000448152 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
GAPDHP16-201ENST00000448152 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
GAPDHP16-201ENST00000448152 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.73
GAPDHP16-201ENST00000448152 GRXCR2A6NFK2 248 aa10.5□□□□□ -0.73
GAPDHP16-201ENST00000448152 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
GAPDHP16-201ENST00000448152 KCNV2Q8TDN2 545 aa10.5□□□□□ -0.73
GAPDHP16-201ENST00000448152 SAMD9Q5K651 1589 aa10.5□□□□□ -0.73
GAPDHP16-201ENST00000448152 SCAPERQ9BY12 1400 aa10.5□□□□□ -0.73
GAPDHP16-201ENST00000448152 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
GAPDHP16-201ENST00000448152 ZNF335Q9H4Z2 1342 aaPredicted RBP10.49□□□□□ -0.73
GAPDHP16-201ENST00000448152 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
GAPDHP16-201ENST00000448152 HCSTQ9UBK5 93 aa10.48□□□□□ -0.73
GAPDHP16-201ENST00000448152 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
GAPDHP16-201ENST00000448152 HSPA1LP34931 641 aa10.47□□□□□ -0.73
GAPDHP16-201ENST00000448152 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
GAPDHP16-201ENST00000448152 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
GAPDHP16-201ENST00000448152 PLEKHD1A6NEE1 506 aa10.45□□□□□ -0.74
GAPDHP16-201ENST00000448152 COL9A1P20849 921 aa10.45□□□□□ -0.74
GAPDHP16-201ENST00000448152 REREQ9P2R6 1566 aa10.44□□□□□ -0.74
GAPDHP16-201ENST00000448152 DIP2CQ9Y2E4 1556 aa10.44□□□□□ -0.74
GAPDHP16-201ENST00000448152 PLCH2O75038 1416 aa10.44□□□□□ -0.74
GAPDHP16-201ENST00000448152 BHMG1C9JSJ3 638 aaPredicted RBP10.44□□□□□ -0.74
GAPDHP16-201ENST00000448152 LAPTM4BQ86VI4 370 aa10.44□□□□□ -0.74
GAPDHP16-201ENST00000448152 KDM5CP41229 1560 aa10.43□□□□□ -0.74
GAPDHP16-201ENST00000448152 KCTD12Q96CX2 325 aaKnown RBP10.43□□□□□ -0.74
GAPDHP16-201ENST00000448152 TRIM6-TRIM34B2RNG4 842 aa10.42□□□□□ -0.74
GAPDHP16-201ENST00000448152 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
GAPDHP16-201ENST00000448152 PACS2Q86VP3 889 aa10.42□□□□□ -0.74
GAPDHP16-201ENST00000448152 AGLP35573 1532 aa10.42□□□□□ -0.74
GAPDHP16-201ENST00000448152 ZNF518AQ6AHZ1 1483 aa10.42□□□□□ -0.74
GAPDHP16-201ENST00000448152 ABCA6Q8N139 1617 aa10.41□□□□□ -0.74
GAPDHP16-201ENST00000448152 OSBPP22059 807 aa10.41□□□□□ -0.74
GAPDHP16-201ENST00000448152 PIP4K2BP78356 416 aa10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 VSIG10Q8N0Z9 540 aa10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 WNT2BQ93097 391 aa10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 MYO5CQ9NQX4 1742 aa10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 PLA2R1Q13018 1463 aa10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 TCOF1Q13428 1488 aaKnown RBP10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 ZNF142P52746 1687 aaPredicted RBP10.4□□□□□ -0.74
GAPDHP16-201ENST00000448152 NPATQ14207 1427 aa10.4□□□□□ -0.75
GAPDHP16-201ENST00000448152 VPS8Q8N3P4 1428 aa10.4□□□□□ -0.75
GAPDHP16-201ENST00000448152 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
GAPDHP16-201ENST00000448152 CNTLNQ9NXG0 1405 aa10.39□□□□□ -0.75
GAPDHP16-201ENST00000448152 MROH2AA6NES4 1674 aa10.38□□□□□ -0.75
GAPDHP16-201ENST00000448152 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
GAPDHP16-201ENST00000448152 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
GAPDHP16-201ENST00000448152 RBM27Q9P2N5 1060 aaKnown RBP10.38□□□□□ -0.75
GAPDHP16-201ENST00000448152 SUPT6HQ7KZ85 1726 aaKnown RBP10.38□□□□□ -0.75
GAPDHP16-201ENST00000448152 MYO3AQ8NEV4 1616 aa10.37□□□□□ -0.75
GAPDHP16-201ENST00000448152 TOM1O60784 492 aa10.37□□□□□ -0.75
GAPDHP16-201ENST00000448152 UBTFP17480 764 aaKnown RBP10.37□□□□□ -0.75
GAPDHP16-201ENST00000448152 PRSS12P56730 875 aa10.37□□□□□ -0.75
GAPDHP16-201ENST00000448152 AFAP1Q8N556 730 aa10.37□□□□□ -0.75
GAPDHP16-201ENST00000448152 CDK13Q14004 1512 aaKnown RBP10.37□□□□□ -0.75
GAPDHP16-201ENST00000448152 NBPF26B4DH59 902 aa10.36□□□□□ -0.75
GAPDHP16-201ENST00000448152 FAM98CQ17RN3 349 aaKnown RBP10.36□□□□□ -0.75
GAPDHP16-201ENST00000448152 EFCAB2Q5VUJ9 269 aa10.36□□□□□ -0.75
GAPDHP16-201ENST00000448152 CDCA7LQ96GN5 454 aa10.36□□□□□ -0.75
GAPDHP16-201ENST00000448152 ALKQ9UM73 1620 aa10.36□□□□□ -0.75
GAPDHP16-201ENST00000448152 MLH3Q9UHC1 1453 aa10.36□□□□□ -0.75
GAPDHP16-201ENST00000448152 CEP170BQ9Y4F5 1589 aaPredicted RBP10.35□□□□□ -0.75
GAPDHP16-201ENST00000448152 CPS1P31327 1500 aa10.35□□□□□ -0.75
GAPDHP16-201ENST00000448152 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
GAPDHP16-201ENST00000448152 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
GAPDHP16-201ENST00000448152 CLIP1P30622 1438 aa10.33□□□□□ -0.76
GAPDHP16-201ENST00000448152 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
GAPDHP16-201ENST00000448152 TIMELESSQ9UNS1 1208 aa10.33□□□□□ -0.76
GAPDHP16-201ENST00000448152 PTPN5P54829 565 aa10.32□□□□□ -0.76
GAPDHP16-201ENST00000448152 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
GAPDHP16-201ENST00000448152 KIF14Q15058 1648 aa10.32□□□□□ -0.76
GAPDHP16-201ENST00000448152 ARHGAP5Q13017 1502 aa10.32□□□□□ -0.76
GAPDHP16-201ENST00000448152 ZMYM3Q14202 1370 aa10.31□□□□□ -0.76
GAPDHP16-201ENST00000448152 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
GAPDHP16-201ENST00000448152 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
GAPDHP16-201ENST00000448152 KIDINS220Q9ULH0 1771 aa10.31□□□□□ -0.76
GAPDHP16-201ENST00000448152 PTPRKQ15262 1439 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms