RNA–Protein interactions for RNA: ENST00000447048.1

RUBCN-205, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-205ENST00000447048 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
RUBCN-205ENST00000447048 TRAK1Q9UPV9 953 aa13.7□□□□□ -0.22
RUBCN-205ENST00000447048 USP32Q8NFA0 1604 aa13.7□□□□□ -0.22
RUBCN-205ENST00000447048 PLEKHH1Q9ULM0 1364 aa13.7□□□□□ -0.22
RUBCN-205ENST00000447048 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
RUBCN-205ENST00000447048 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
RUBCN-205ENST00000447048 USP47Q96K76 1375 aa13.69□□□□□ -0.22
RUBCN-205ENST00000447048 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
RUBCN-205ENST00000447048 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
RUBCN-205ENST00000447048 ROBO1Q9Y6N7 1651 aa13.68□□□□□ -0.22
RUBCN-205ENST00000447048 SBNO2Q9Y2G9 1366 aa13.68□□□□□ -0.22
RUBCN-205ENST00000447048 CERKQ8TCT0 537 aa13.67□□□□□ -0.22
RUBCN-205ENST00000447048 CENPJQ9HC77 1338 aaPredicted RBP13.66□□□□□ -0.22
RUBCN-205ENST00000447048 NHSL1Q5SYE7 1610 aa13.66□□□□□ -0.22
RUBCN-205ENST00000447048 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
RUBCN-205ENST00000447048 POGKQ9P215 609 aa13.66□□□□□ -0.22
RUBCN-205ENST00000447048 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
RUBCN-205ENST00000447048 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
RUBCN-205ENST00000447048 MYOM1P52179 1685 aa13.64□□□□□ -0.23
RUBCN-205ENST00000447048 ZEB1P37275 1124 aaPredicted RBP13.64□□□□□ -0.23
RUBCN-205ENST00000447048 MST1RQ04912 1400 aa13.64□□□□□ -0.23
RUBCN-205ENST00000447048 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.23
RUBCN-205ENST00000447048 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
RUBCN-205ENST00000447048 ANKARQ7Z5J8 1434 aa13.63□□□□□ -0.23
RUBCN-205ENST00000447048 ATP7BP35670 1465 aa13.62□□□□□ -0.23
RUBCN-205ENST00000447048 AKAP12Q02952 1782 aa13.62□□□□□ -0.23
RUBCN-205ENST00000447048 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
RUBCN-205ENST00000447048 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
RUBCN-205ENST00000447048 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
RUBCN-205ENST00000447048 ATF3P18847 181 aa13.6□□□□□ -0.23
RUBCN-205ENST00000447048 AHDC1Q5TGY3 1603 aaPredicted RBP13.6□□□□□ -0.23
RUBCN-205ENST00000447048 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
RUBCN-205ENST00000447048 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
RUBCN-205ENST00000447048 HIRIP3Q9BW71 556 aaPredicted RBP13.58□□□□□ -0.24
RUBCN-205ENST00000447048 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
RUBCN-205ENST00000447048 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
RUBCN-205ENST00000447048 NRKQ7Z2Y5 1582 aa13.57□□□□□ -0.24
RUBCN-205ENST00000447048 UBAP1LF5GYI3 381 aa13.56□□□□□ -0.24
RUBCN-205ENST00000447048 WASLO00401 505 aaPredicted RBP13.56□□□□□ -0.24
RUBCN-205ENST00000447048 TOM1O60784 492 aa13.56□□□□□ -0.24
RUBCN-205ENST00000447048 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
RUBCN-205ENST00000447048 COL16A1Q07092 1604 aaPredicted RBP13.56□□□□□ -0.24
RUBCN-205ENST00000447048 TRPM3Q9HCF6 1732 aaPredicted RBP13.56□□□□□ -0.24
RUBCN-205ENST00000447048 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
RUBCN-205ENST00000447048 TESK2Q96S53 571 aa13.55□□□□□ -0.24
RUBCN-205ENST00000447048 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
RUBCN-205ENST00000447048 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
RUBCN-205ENST00000447048 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
RUBCN-205ENST00000447048 ATAD2Q6PL18 1390 aa13.53□□□□□ -0.24
RUBCN-205ENST00000447048 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
RUBCN-205ENST00000447048 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
RUBCN-205ENST00000447048 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
RUBCN-205ENST00000447048 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
RUBCN-205ENST00000447048 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
RUBCN-205ENST00000447048 ABCA3Q99758 1704 aa13.52□□□□□ -0.25
RUBCN-205ENST00000447048 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
RUBCN-205ENST00000447048 TMF1P82094 1093 aa13.51□□□□□ -0.25
RUBCN-205ENST00000447048 CDK19Q9BWU1 502 aa13.51□□□□□ -0.25
RUBCN-205ENST00000447048 PXDNQ92626 1479 aa13.5□□□□□ -0.25
RUBCN-205ENST00000447048 NINLQ9Y2I6 1382 aa13.5□□□□□ -0.25
RUBCN-205ENST00000447048 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
RUBCN-205ENST00000447048 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
RUBCN-205ENST00000447048 ILDR2Q71H61 639 aa13.5□□□□□ -0.25
RUBCN-205ENST00000447048 SOCS7O14512 581 aa13.49□□□□□ -0.25
RUBCN-205ENST00000447048 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
RUBCN-205ENST00000447048 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
RUBCN-205ENST00000447048 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
RUBCN-205ENST00000447048 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
RUBCN-205ENST00000447048 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
RUBCN-205ENST00000447048 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
RUBCN-205ENST00000447048 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
RUBCN-205ENST00000447048 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
RUBCN-205ENST00000447048 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
RUBCN-205ENST00000447048 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
RUBCN-205ENST00000447048 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
RUBCN-205ENST00000447048 PUS7Q96PZ0 661 aaKnown RBP13.47□□□□□ -0.25
RUBCN-205ENST00000447048 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
RUBCN-205ENST00000447048 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
RUBCN-205ENST00000447048 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.25
RUBCN-205ENST00000447048 ORAI2Q96SN7 254 aa13.46□□□□□ -0.25
RUBCN-205ENST00000447048 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
RUBCN-205ENST00000447048 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
RUBCN-205ENST00000447048 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
RUBCN-205ENST00000447048 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
RUBCN-205ENST00000447048 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
RUBCN-205ENST00000447048 USP6P35125 1406 aa13.43□□□□□ -0.26
RUBCN-205ENST00000447048 CPSF1Q10570 1443 aaKnown RBP13.43□□□□□ -0.26
RUBCN-205ENST00000447048 TNS3Q68CZ2 1445 aa13.43□□□□□ -0.26
RUBCN-205ENST00000447048 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
RUBCN-205ENST00000447048 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
RUBCN-205ENST00000447048 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
RUBCN-205ENST00000447048 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
RUBCN-205ENST00000447048 CCDC7Q96M83 1385 aa13.42□□□□□ -0.26
RUBCN-205ENST00000447048 ACEP12821 1306 aa13.41□□□□□ -0.26
RUBCN-205ENST00000447048 KIF7Q2M1P5 1343 aa13.41□□□□□ -0.26
RUBCN-205ENST00000447048 NGDNQ8NEJ9 315 aaKnown RBP13.41□□□□□ -0.26
RUBCN-205ENST00000447048 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
RUBCN-205ENST00000447048 EDC4Q6P2E9 1401 aaKnown RBP13.4□□□□□ -0.26
RUBCN-205ENST00000447048 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
RUBCN-205ENST00000447048 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms