RNA–Protein interactions for RNA: ENST00000445180.2

LINC01648-201, Transcript of long intergenic non-protein coding RNA 1648, humanhuman

TSL 1 (best) BASIC

Gene LINC01648, Length 1,519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01648-201ENST00000445180 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
LINC01648-201ENST00000445180 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
LINC01648-201ENST00000445180 AMER1Q5JTC6 1135 aaPredicted RBP20■□□□□ 0.79
LINC01648-201ENST00000445180 TECPR2O15040 1411 aa20■□□□□ 0.79
LINC01648-201ENST00000445180 WAPLQ7Z5K2 1190 aa19.99■□□□□ 0.79
LINC01648-201ENST00000445180 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
LINC01648-201ENST00000445180 FAM135BQ49AJ0 1406 aa19.99■□□□□ 0.79
LINC01648-201ENST00000445180 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
LINC01648-201ENST00000445180 CARD14Q9BXL6 1004 aa19.98■□□□□ 0.79
LINC01648-201ENST00000445180 CABP2Q9NPB3 220 aa19.98■□□□□ 0.79
LINC01648-201ENST00000445180 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
LINC01648-201ENST00000445180 SLC26A8Q96RN1 970 aa19.97■□□□□ 0.79
LINC01648-201ENST00000445180 BRD4O60885 1362 aaPredicted RBP19.96■□□□□ 0.79
LINC01648-201ENST00000445180 PLEKHH1Q9ULM0 1364 aa19.96■□□□□ 0.79
LINC01648-201ENST00000445180 SRPK2P78362 688 aaKnown RBP19.96■□□□□ 0.79
LINC01648-201ENST00000445180 CDK19Q9BWU1 502 aa19.96■□□□□ 0.79
LINC01648-201ENST00000445180 NLRP13Q86W25 1043 aa19.95■□□□□ 0.78
LINC01648-201ENST00000445180 ANKLE2Q86XL3 938 aa19.95■□□□□ 0.78
LINC01648-201ENST00000445180 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
LINC01648-201ENST00000445180 NINLQ9Y2I6 1382 aa19.94■□□□□ 0.78
LINC01648-201ENST00000445180 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
LINC01648-201ENST00000445180 ZNF142P52746 1687 aaPredicted RBP19.93■□□□□ 0.78
LINC01648-201ENST00000445180 CPS1P31327 1500 aa19.92■□□□□ 0.78
LINC01648-201ENST00000445180 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
LINC01648-201ENST00000445180 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
LINC01648-201ENST00000445180 PTPRUQ92729 1446 aa19.91■□□□□ 0.78
LINC01648-201ENST00000445180 ANKRD36BQ8N2N9 1353 aa19.9■□□□□ 0.78
LINC01648-201ENST00000445180 WASLO00401 505 aaPredicted RBP19.9■□□□□ 0.78
LINC01648-201ENST00000445180 DIP2AQ14689 1571 aa19.9■□□□□ 0.78
LINC01648-201ENST00000445180 AMOTL2Q9Y2J4 779 aa19.9■□□□□ 0.78
LINC01648-201ENST00000445180 ROBO2Q9HCK4 1378 aa19.89■□□□□ 0.78
LINC01648-201ENST00000445180 PIK3R4Q99570 1358 aa19.88■□□□□ 0.77
LINC01648-201ENST00000445180 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
LINC01648-201ENST00000445180 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
LINC01648-201ENST00000445180 TERF2IPQ9NYB0 399 aa19.86■□□□□ 0.77
LINC01648-201ENST00000445180 HNRNPUQ00839 825 aaKnown RBP eCLIP19.85■□□□□ 0.77
LINC01648-201ENST00000445180 CABP1Q9NZU7 370 aa19.84■□□□□ 0.77
LINC01648-201ENST00000445180 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.77
LINC01648-201ENST00000445180 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
LINC01648-201ENST00000445180 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
LINC01648-201ENST00000445180 A0A1W2PP64 1363 aa19.81■□□□□ 0.76
LINC01648-201ENST00000445180 NUDT16Q96DE0 195 aaKnown RBP19.81■□□□□ 0.76
LINC01648-201ENST00000445180 CD163L1Q9NR16 1453 aa19.8■□□□□ 0.76
LINC01648-201ENST00000445180 CCDC61Q9Y6R9 512 aa19.8■□□□□ 0.76
LINC01648-201ENST00000445180 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
LINC01648-201ENST00000445180 NSD2O96028 1365 aa19.79■□□□□ 0.76
LINC01648-201ENST00000445180 MORC1Q86VD1 984 aa19.79■□□□□ 0.76
LINC01648-201ENST00000445180 NPHP4O75161 1426 aaPredicted RBP19.78■□□□□ 0.76
LINC01648-201ENST00000445180 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
LINC01648-201ENST00000445180 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.77■□□□□ 0.76
LINC01648-201ENST00000445180 KCNA6P17658 529 aa19.77■□□□□ 0.76
LINC01648-201ENST00000445180 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
LINC01648-201ENST00000445180 ATP7BP35670 1465 aa19.76■□□□□ 0.75
LINC01648-201ENST00000445180 KDM4FA0A1W2PPD8 638 aa19.76■□□□□ 0.75
LINC01648-201ENST00000445180 INSRP06213 1382 aa19.75■□□□□ 0.75
LINC01648-201ENST00000445180 NCKAP5LQ9HCH0 1330 aa19.75■□□□□ 0.75
LINC01648-201ENST00000445180 PRR36Q9H6K5 1346 aa19.74■□□□□ 0.75
LINC01648-201ENST00000445180 CPSF1Q10570 1443 aaKnown RBP19.74■□□□□ 0.75
LINC01648-201ENST00000445180 PPIP5K1Q6PFW1 1433 aa19.74■□□□□ 0.75
LINC01648-201ENST00000445180 ZBED9Q6R2W3 1325 aa19.73■□□□□ 0.75
LINC01648-201ENST00000445180 FYB1O15117 783 aa19.73■□□□□ 0.75
LINC01648-201ENST00000445180 PLEKHG3A1L390 1219 aa19.72■□□□□ 0.75
LINC01648-201ENST00000445180 ZNF692Q9BU19 519 aaPredicted RBP19.72■□□□□ 0.75
LINC01648-201ENST00000445180 CHD2O14647 1828 aaKnown RBP19.71■□□□□ 0.75
LINC01648-201ENST00000445180 POLR3AO14802 1390 aaPredicted RBP19.69■□□□□ 0.74
LINC01648-201ENST00000445180 GGNBP2Q9H3C7 697 aa19.69■□□□□ 0.74
LINC01648-201ENST00000445180 EDC4Q6P2E9 1401 aaKnown RBP19.67■□□□□ 0.74
LINC01648-201ENST00000445180 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
LINC01648-201ENST00000445180 GTF3C3Q9Y5Q9 886 aa19.67■□□□□ 0.74
LINC01648-201ENST00000445180 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
LINC01648-201ENST00000445180 CDC42BPGQ6DT37 1551 aa19.67■□□□□ 0.74
LINC01648-201ENST00000445180 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
LINC01648-201ENST00000445180 WDR43Q15061 677 aaKnown RBP eCLIP19.66■□□□□ 0.74
LINC01648-201ENST00000445180 MTHFSP49914 203 aa19.65■□□□□ 0.74
LINC01648-201ENST00000445180 NUTM2FA1L443 756 aa19.64■□□□□ 0.73
LINC01648-201ENST00000445180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.64■□□□□ 0.73
LINC01648-201ENST00000445180 ACEP12821 1306 aa19.63■□□□□ 0.73
LINC01648-201ENST00000445180 BLMP54132 1417 aaPredicted RBP19.63■□□□□ 0.73
LINC01648-201ENST00000445180 ANKARQ7Z5J8 1434 aa19.63■□□□□ 0.73
LINC01648-201ENST00000445180 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
LINC01648-201ENST00000445180 TOPAZ1Q8N9V7 1692 aa19.61■□□□□ 0.73
LINC01648-201ENST00000445180 HSPA2P54652 639 aa19.6■□□□□ 0.73
LINC01648-201ENST00000445180 AKAP12Q02952 1782 aa19.59■□□□□ 0.73
LINC01648-201ENST00000445180 ANKRD26Q9UPS8 1709 aa19.59■□□□□ 0.73
LINC01648-201ENST00000445180 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
LINC01648-201ENST00000445180 MON2Q7Z3U7 1717 aa19.58■□□□□ 0.73
LINC01648-201ENST00000445180 TTC21BQ7Z4L5 1316 aa19.58■□□□□ 0.73
LINC01648-201ENST00000445180 NME9Q86XW9 330 aa19.58■□□□□ 0.73
LINC01648-201ENST00000445180 ADGRL3Q9HAR2 1447 aa19.58■□□□□ 0.72
LINC01648-201ENST00000445180 PROSER2Q86WR7 435 aaPredicted RBP19.57■□□□□ 0.72
LINC01648-201ENST00000445180 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
LINC01648-201ENST00000445180 USP6P35125 1406 aa19.57■□□□□ 0.72
LINC01648-201ENST00000445180 KIF20BQ96Q89 1820 aa19.57■□□□□ 0.72
LINC01648-201ENST00000445180 PMFBP1Q8TBY8 1022 aa19.56■□□□□ 0.72
LINC01648-201ENST00000445180 NGDNQ8NEJ9 315 aaKnown RBP19.56■□□□□ 0.72
LINC01648-201ENST00000445180 RBM33Q96EV2 1170 aaKnown RBP19.56■□□□□ 0.72
LINC01648-201ENST00000445180 COG3Q96JB2 828 aa19.56■□□□□ 0.72
LINC01648-201ENST00000445180 SSH2Q76I76 1423 aa19.55■□□□□ 0.72
LINC01648-201ENST00000445180 ITSN1Q15811 1721 aa19.55■□□□□ 0.72
LINC01648-201ENST00000445180 FMN2Q9NZ56 1722 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms