RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
HDAC8-215ENST00000444609 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
HDAC8-215ENST00000444609 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
HDAC8-215ENST00000444609 METP08581 1390 aa16.35■□□□□ 0.21
HDAC8-215ENST00000444609 MYO5BQ9ULV0 1848 aa16.34■□□□□ 0.21
HDAC8-215ENST00000444609 CAMKK2Q96RR4 588 aa16.34■□□□□ 0.21
HDAC8-215ENST00000444609 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
HDAC8-215ENST00000444609 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
HDAC8-215ENST00000444609 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
HDAC8-215ENST00000444609 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
HDAC8-215ENST00000444609 MARF1Q9Y4F3 1742 aaKnown RBP16.31■□□□□ 0.2
HDAC8-215ENST00000444609 KCNQ2O43526 872 aa16.3■□□□□ 0.2
HDAC8-215ENST00000444609 ABCC5O15440 1437 aa16.29■□□□□ 0.2
HDAC8-215ENST00000444609 A0A0G2JS52 829 aa16.29■□□□□ 0.2
HDAC8-215ENST00000444609 MYT1Q01538 1121 aa16.29■□□□□ 0.2
HDAC8-215ENST00000444609 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
HDAC8-215ENST00000444609 FAM182BQ5T319 152 aa16.29■□□□□ 0.2
HDAC8-215ENST00000444609 PXDNQ92626 1479 aa16.29■□□□□ 0.2
HDAC8-215ENST00000444609 FOXO3O43524 673 aa16.28■□□□□ 0.2
HDAC8-215ENST00000444609 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
HDAC8-215ENST00000444609 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.2
HDAC8-215ENST00000444609 CEP350Q5VT06 3117 aa16.26■□□□□ 0.19
HDAC8-215ENST00000444609 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
HDAC8-215ENST00000444609 UTRNP46939 3433 aa16.26■□□□□ 0.19
HDAC8-215ENST00000444609 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
HDAC8-215ENST00000444609 NBPF8Q3BBV2 869 aa16.25■□□□□ 0.19
HDAC8-215ENST00000444609 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
HDAC8-215ENST00000444609 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
HDAC8-215ENST00000444609 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
HDAC8-215ENST00000444609 NRXN3Q9Y4C0 1643 aa16.23■□□□□ 0.19
HDAC8-215ENST00000444609 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
HDAC8-215ENST00000444609 LRPPRCP42704 1394 aaKnown RBP16.22■□□□□ 0.19
HDAC8-215ENST00000444609 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
HDAC8-215ENST00000444609 SPATA31A3Q5VYP0 1347 aa16.21■□□□□ 0.19
HDAC8-215ENST00000444609 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
HDAC8-215ENST00000444609 TRIM37O94972 964 aa16.21■□□□□ 0.19
HDAC8-215ENST00000444609 APBA3O96018 575 aa16.21■□□□□ 0.19
HDAC8-215ENST00000444609 ROBO2Q9HCK4 1378 aa16.19■□□□□ 0.18
HDAC8-215ENST00000444609 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
HDAC8-215ENST00000444609 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
HDAC8-215ENST00000444609 HAP1P54257 671 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-215ENST00000444609 USP32Q8NFA0 1604 aa16.18■□□□□ 0.18
HDAC8-215ENST00000444609 DAPK1P53355 1430 aa16.18■□□□□ 0.18
HDAC8-215ENST00000444609 FAM83GA6ND36 823 aa16.17■□□□□ 0.18
HDAC8-215ENST00000444609 TNS1Q9HBL0 1735 aaKnown RBP16.16■□□□□ 0.18
HDAC8-215ENST00000444609 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
HDAC8-215ENST00000444609 CABLES1Q8TDN4 633 aa16.16■□□□□ 0.18
HDAC8-215ENST00000444609 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
HDAC8-215ENST00000444609 CROCC2H7BZ55 1655 aa16.12■□□□□ 0.17
HDAC8-215ENST00000444609 NWD2Q9ULI1 1742 aa16.12■□□□□ 0.17
HDAC8-215ENST00000444609 ZNF326Q5BKZ1 582 aaKnown RBP16.11■□□□□ 0.17
HDAC8-215ENST00000444609 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
HDAC8-215ENST00000444609 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
HDAC8-215ENST00000444609 SYT17Q9BSW7 474 aa16.11■□□□□ 0.17
HDAC8-215ENST00000444609 SPATA31A5Q5VU36 1347 aa16.11■□□□□ 0.17
HDAC8-215ENST00000444609 SPATA31A7Q8IWB4 1347 aa16.11■□□□□ 0.17
HDAC8-215ENST00000444609 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
HDAC8-215ENST00000444609 BTG4Q9NY30 223 aa16.1■□□□□ 0.17
HDAC8-215ENST00000444609 PTGER2P43116 358 aa16.09■□□□□ 0.17
HDAC8-215ENST00000444609 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
HDAC8-215ENST00000444609 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.17
HDAC8-215ENST00000444609 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
HDAC8-215ENST00000444609 ANKRD50Q9ULJ7 1429 aa16.08■□□□□ 0.16
HDAC8-215ENST00000444609 NUTM2FA1L443 756 aa16.07■□□□□ 0.16
HDAC8-215ENST00000444609 FHDC1Q9C0D6 1143 aaPredicted RBP16.07■□□□□ 0.16
HDAC8-215ENST00000444609 CCDC144AA2RUR9 1427 aa16.07■□□□□ 0.16
HDAC8-215ENST00000444609 RREB1Q92766 1687 aa16.07■□□□□ 0.16
HDAC8-215ENST00000444609 NUP188Q5SRE5 1749 aa16.06■□□□□ 0.16
HDAC8-215ENST00000444609 IQGAP3Q86VI3 1631 aa16.05■□□□□ 0.16
HDAC8-215ENST00000444609 NRKQ7Z2Y5 1582 aa16.05■□□□□ 0.16
HDAC8-215ENST00000444609 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
HDAC8-215ENST00000444609 TNS3Q68CZ2 1445 aa16.04■□□□□ 0.16
HDAC8-215ENST00000444609 ZBTB7AO95365 584 aa16.04■□□□□ 0.16
HDAC8-215ENST00000444609 PSME1Q06323 249 aa16.04■□□□□ 0.16
HDAC8-215ENST00000444609 PDGFDQ9GZP0 370 aaPredicted RBP16.04■□□□□ 0.16
HDAC8-215ENST00000444609 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
HDAC8-215ENST00000444609 E9PCH4 1651 aa16.02■□□□□ 0.16
HDAC8-215ENST00000444609 CHD4Q14839 1912 aa16.02■□□□□ 0.16
HDAC8-215ENST00000444609 HSPA6P17066 643 aa16.01■□□□□ 0.15
HDAC8-215ENST00000444609 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
HDAC8-215ENST00000444609 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
HDAC8-215ENST00000444609 NRAPQ86VF7 1730 aa16■□□□□ 0.15
HDAC8-215ENST00000444609 NAIPQ13075 1403 aa16■□□□□ 0.15
HDAC8-215ENST00000444609 SBNO1A3KN83 1393 aa16■□□□□ 0.15
HDAC8-215ENST00000444609 ARHGEF10O15013 1369 aa16■□□□□ 0.15
HDAC8-215ENST00000444609 SLC34A2O95436 690 aa15.99■□□□□ 0.15
HDAC8-215ENST00000444609 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
HDAC8-215ENST00000444609 SPATA31A1Q5TZJ5 1347 aa15.98■□□□□ 0.15
HDAC8-215ENST00000444609 MYOM1P52179 1685 aa15.98■□□□□ 0.15
HDAC8-215ENST00000444609 NEXMIFQ5QGS0 1516 aa15.98■□□□□ 0.15
HDAC8-215ENST00000444609 RRBP1Q9P2E9 1410 aaKnown RBP15.97■□□□□ 0.15
HDAC8-215ENST00000444609 PDE3BQ13370 1112 aa15.97■□□□□ 0.15
HDAC8-215ENST00000444609 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
HDAC8-215ENST00000444609 GPR162Q16538 588 aa15.96■□□□□ 0.15
HDAC8-215ENST00000444609 SGIP1Q9BQI5 828 aa15.96■□□□□ 0.15
HDAC8-215ENST00000444609 PLSCR1O15162 318 aa15.95■□□□□ 0.14
HDAC8-215ENST00000444609 PHF8Q9UPP1 1060 aa15.95■□□□□ 0.14
HDAC8-215ENST00000444609 CASZ1Q86V15 1759 aa15.95■□□□□ 0.14
HDAC8-215ENST00000444609 CAPN15O75808 1086 aa15.94■□□□□ 0.14
HDAC8-215ENST00000444609 WAPLQ7Z5K2 1190 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms