RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 USP47Q96K76 1375 aa18.96■□□□□ 0.63
SF1-210ENST00000443908 NBPF1Q3BBV0 1214 aa18.96■□□□□ 0.63
SF1-210ENST00000443908 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
SF1-210ENST00000443908 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
SF1-210ENST00000443908 CFAP70Q5T0N1 1121 aa18.95■□□□□ 0.62
SF1-210ENST00000443908 SETD1AO15047 1707 aaKnown RBP18.94■□□□□ 0.62
SF1-210ENST00000443908 RXRBP28702 533 aa18.93■□□□□ 0.62
SF1-210ENST00000443908 ASXL1Q8IXJ9 1541 aa18.93■□□□□ 0.62
SF1-210ENST00000443908 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
SF1-210ENST00000443908 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
SF1-210ENST00000443908 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
SF1-210ENST00000443908 LRRC59Q96AG4 307 aaKnown RBP18.9■□□□□ 0.62
SF1-210ENST00000443908 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.9■□□□□ 0.62
SF1-210ENST00000443908 EIF3AQ14152 1382 aaKnown RBP18.9■□□□□ 0.62
SF1-210ENST00000443908 DDX17Q92841 729 aaKnown RBP18.88■□□□□ 0.61
SF1-210ENST00000443908 COL16A1Q07092 1604 aaPredicted RBP18.88■□□□□ 0.61
SF1-210ENST00000443908 LRP6O75581 1613 aa18.87■□□□□ 0.61
SF1-210ENST00000443908 METP08581 1390 aa18.87■□□□□ 0.61
SF1-210ENST00000443908 UPF1Q92900 1129 aaKnown RBP eCLIP18.87■□□□□ 0.618e-34■■■■□ 22.7
SF1-210ENST00000443908 AFF2P51816 1311 aa18.85■□□□□ 0.61
SF1-210ENST00000443908 C8orf37Q96NL8 207 aa18.85■□□□□ 0.61
SF1-210ENST00000443908 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
SF1-210ENST00000443908 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
SF1-210ENST00000443908 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.61
SF1-210ENST00000443908 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
SF1-210ENST00000443908 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.61
SF1-210ENST00000443908 QTRT2Q9H974 415 aaKnown RBP18.83■□□□□ 0.6
SF1-210ENST00000443908 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.6
SF1-210ENST00000443908 TECPR2O15040 1411 aa18.83■□□□□ 0.6
SF1-210ENST00000443908 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
SF1-210ENST00000443908 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
SF1-210ENST00000443908 DCCP43146 1447 aa18.82■□□□□ 0.6
SF1-210ENST00000443908 TMEM132EQ6IEE7 984 aa18.81■□□□□ 0.6
SF1-210ENST00000443908 NGLY1Q96IV0 654 aa18.81■□□□□ 0.6
SF1-210ENST00000443908 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
SF1-210ENST00000443908 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
SF1-210ENST00000443908 ADAMTS2O95450 1211 aa18.8■□□□□ 0.6
SF1-210ENST00000443908 MST1RQ04912 1400 aa18.8■□□□□ 0.6
SF1-210ENST00000443908 TESK2Q96S53 571 aa18.79■□□□□ 0.6
SF1-210ENST00000443908 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
SF1-210ENST00000443908 RBM6P78332 1123 aaKnown RBP18.77■□□□□ 0.6
SF1-210ENST00000443908 ORAI2Q96SN7 254 aa18.77■□□□□ 0.6
SF1-210ENST00000443908 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
SF1-210ENST00000443908 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
SF1-210ENST00000443908 SIRT1Q96EB6 747 aa18.76■□□□□ 0.59
SF1-210ENST00000443908 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
SF1-210ENST00000443908 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
SF1-210ENST00000443908 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
SF1-210ENST00000443908 ADGRL3Q9HAR2 1447 aa18.75■□□□□ 0.59
SF1-210ENST00000443908 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
SF1-210ENST00000443908 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
SF1-210ENST00000443908 WASHC2AQ641Q2 1341 aa18.74■□□□□ 0.59
SF1-210ENST00000443908 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
SF1-210ENST00000443908 KIF7Q2M1P5 1343 aa18.73■□□□□ 0.59
SF1-210ENST00000443908 TMF1P82094 1093 aa18.72■□□□□ 0.59
SF1-210ENST00000443908 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
SF1-210ENST00000443908 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
SF1-210ENST00000443908 ESCO1Q5FWF5 840 aa18.71■□□□□ 0.59
SF1-210ENST00000443908 USP21Q9UK80 565 aa18.71■□□□□ 0.59
SF1-210ENST00000443908 ROBO2Q9HCK4 1378 aa18.7■□□□□ 0.58
SF1-210ENST00000443908 STK26Q9P289 416 aa18.7■□□□□ 0.58
SF1-210ENST00000443908 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
SF1-210ENST00000443908 PRAM1Q96QH2 718 aa18.68■□□□□ 0.58
SF1-210ENST00000443908 SOS2Q07890 1332 aaPredicted RBP18.68■□□□□ 0.58
SF1-210ENST00000443908 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
SF1-210ENST00000443908 NUTM2FA1L443 756 aa18.67■□□□□ 0.58
SF1-210ENST00000443908 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
SF1-210ENST00000443908 TULP4Q9NRJ4 1543 aa18.66■□□□□ 0.58
SF1-210ENST00000443908 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
SF1-210ENST00000443908 POGKQ9P215 609 aa18.66■□□□□ 0.58
SF1-210ENST00000443908 ADGRB2O60241 1585 aa18.66■□□□□ 0.58
SF1-210ENST00000443908 FOXO3O43524 673 aa18.65■□□□□ 0.58
SF1-210ENST00000443908 XPCQ01831 940 aaPredicted RBP18.65■□□□□ 0.58
SF1-210ENST00000443908 NHSL1Q5SYE7 1610 aa18.64■□□□□ 0.57
SF1-210ENST00000443908 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
SF1-210ENST00000443908 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
SF1-210ENST00000443908 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
SF1-210ENST00000443908 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
SF1-210ENST00000443908 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
SF1-210ENST00000443908 RGS12O14924 1447 aa18.62■□□□□ 0.57
SF1-210ENST00000443908 NALCNQ8IZF0 1738 aa18.61■□□□□ 0.57
SF1-210ENST00000443908 FNBP4Q8N3X1 1017 aaPredicted RBP18.61■□□□□ 0.57
SF1-210ENST00000443908 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
SF1-210ENST00000443908 MYOM1P52179 1685 aa18.59■□□□□ 0.57
SF1-210ENST00000443908 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
SF1-210ENST00000443908 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
SF1-210ENST00000443908 PLEKHG5O94827 1062 aa18.57■□□□□ 0.56
SF1-210ENST00000443908 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
SF1-210ENST00000443908 NINLQ9Y2I6 1382 aa18.56■□□□□ 0.56
SF1-210ENST00000443908 HAP1P54257 671 aaPredicted RBP18.55■□□□□ 0.56
SF1-210ENST00000443908 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
SF1-210ENST00000443908 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
SF1-210ENST00000443908 WASLO00401 505 aaPredicted RBP18.53■□□□□ 0.56
SF1-210ENST00000443908 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
SF1-210ENST00000443908 GJD4Q96KN9 370 aaPredicted RBP18.53■□□□□ 0.56
SF1-210ENST00000443908 ZRANB1Q9UGI0 708 aa18.53■□□□□ 0.56
SF1-210ENST00000443908 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
SF1-210ENST00000443908 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
SF1-210ENST00000443908 ATRNO75882 1429 aa18.5■□□□□ 0.55
SF1-210ENST00000443908 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms