RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 NFXL1Q6ZNB6 911 aa13.7□□□□□ -0.22
FN1-211ENST00000443816 GAS2L2Q8NHY3 880 aa13.7□□□□□ -0.22
FN1-211ENST00000443816 GOLGA6L1Q8N7Z2 621 aa13.7□□□□□ -0.22
FN1-211ENST00000443816 NUTM2GQ5VZR2 741 aa13.7□□□□□ -0.22
FN1-211ENST00000443816 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
FN1-211ENST00000443816 MCTP1Q6DN14 999 aa13.69□□□□□ -0.22
FN1-211ENST00000443816 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
FN1-211ENST00000443816 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
FN1-211ENST00000443816 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
FN1-211ENST00000443816 BCL2L13Q9BXK5 485 aa13.69□□□□□ -0.22
FN1-211ENST00000443816 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
FN1-211ENST00000443816 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
FN1-211ENST00000443816 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
FN1-211ENST00000443816 HMOX1P09601 288 aa13.68□□□□□ -0.22
FN1-211ENST00000443816 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
FN1-211ENST00000443816 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
FN1-211ENST00000443816 NINLQ9Y2I6 1382 aa13.67□□□□□ -0.22
FN1-211ENST00000443816 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
FN1-211ENST00000443816 GZF1Q9H116 711 aaPredicted RBP13.67□□□□□ -0.22
FN1-211ENST00000443816 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
FN1-211ENST00000443816 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
FN1-211ENST00000443816 SLC3A2P08195 630 aaKnown RBP13.66□□□□□ -0.22
FN1-211ENST00000443816 PDE4CQ08493 712 aa13.66□□□□□ -0.22
FN1-211ENST00000443816 CCDC30Q5VVM6 783 aa13.66□□□□□ -0.22
FN1-211ENST00000443816 ANO2Q9NQ90 1003 aa13.66□□□□□ -0.22
FN1-211ENST00000443816 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
FN1-211ENST00000443816 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
FN1-211ENST00000443816 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
FN1-211ENST00000443816 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
FN1-211ENST00000443816 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
FN1-211ENST00000443816 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
FN1-211ENST00000443816 PIP4K2BP78356 416 aa13.65□□□□□ -0.22
FN1-211ENST00000443816 APAF1O14727 1248 aa13.65□□□□□ -0.22
FN1-211ENST00000443816 RALYLQ86SE5 291 aaKnown RBP13.65□□□□□ -0.22
FN1-211ENST00000443816 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
FN1-211ENST00000443816 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
FN1-211ENST00000443816 DDX11L8A8MPP1 907 aa13.65□□□□□ -0.22
FN1-211ENST00000443816 HFM1A2PYH4 1435 aa13.65□□□□□ -0.23
FN1-211ENST00000443816 XBP1P17861 261 aa13.64□□□□□ -0.23
FN1-211ENST00000443816 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
FN1-211ENST00000443816 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
FN1-211ENST00000443816 SPG7Q9UQ90 795 aa13.64□□□□□ -0.23
FN1-211ENST00000443816 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
FN1-211ENST00000443816 UBTFL1P0CB47 393 aaPredicted RBP13.63□□□□□ -0.23
FN1-211ENST00000443816 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
FN1-211ENST00000443816 WWC2Q6AWC2 1192 aa13.63□□□□□ -0.23
FN1-211ENST00000443816 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
FN1-211ENST00000443816 NEUROD6Q96NK8 337 aa13.63□□□□□ -0.23
FN1-211ENST00000443816 GNL3LQ9NVN8 582 aaKnown RBP13.63□□□□□ -0.23
FN1-211ENST00000443816 IKQ13123 557 aaPredicted RBP13.63□□□□□ -0.23
FN1-211ENST00000443816 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
FN1-211ENST00000443816 PLIN1O60240 522 aa13.63□□□□□ -0.23
FN1-211ENST00000443816 CCDC70Q6NSX1 233 aa13.63□□□□□ -0.23
FN1-211ENST00000443816 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
FN1-211ENST00000443816 CABP4P57796 275 aa13.62□□□□□ -0.23
FN1-211ENST00000443816 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
FN1-211ENST00000443816 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
FN1-211ENST00000443816 CNTLNQ9NXG0 1405 aa13.62□□□□□ -0.23
FN1-211ENST00000443816 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
FN1-211ENST00000443816 BECN2A8MW95 431 aa13.62□□□□□ -0.23
FN1-211ENST00000443816 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
FN1-211ENST00000443816 FYB1O15117 783 aa13.61□□□□□ -0.23
FN1-211ENST00000443816 SART3Q15020 963 aaKnown RBP13.61□□□□□ -0.23
FN1-211ENST00000443816 ITSN2Q9NZM3 1697 aa13.61□□□□□ -0.23
FN1-211ENST00000443816 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
FN1-211ENST00000443816 AAMPQ13685 434 aa13.61□□□□□ -0.23
FN1-211ENST00000443816 PCMTD1Q96MG8 357 aaPredicted RBP13.61□□□□□ -0.23
FN1-211ENST00000443816 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
FN1-211ENST00000443816 WASHC4Q2M389 1173 aa13.61□□□□□ -0.23
FN1-211ENST00000443816 IPO7O95373 1038 aaKnown RBP13.6□□□□□ -0.23
FN1-211ENST00000443816 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
FN1-211ENST00000443816 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
FN1-211ENST00000443816 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
FN1-211ENST00000443816 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
FN1-211ENST00000443816 FOXD4L5Q5VV16 416 aaPredicted RBP13.59□□□□□ -0.23
FN1-211ENST00000443816 FOXD4L4Q8WXT5 416 aaPredicted RBP13.59□□□□□ -0.23
FN1-211ENST00000443816 RRP1P56182 461 aaKnown RBP13.59□□□□□ -0.23
FN1-211ENST00000443816 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
FN1-211ENST00000443816 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
FN1-211ENST00000443816 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
FN1-211ENST00000443816 PNISRQ8TF01 805 aaKnown RBP13.59□□□□□ -0.23
FN1-211ENST00000443816 COG6Q9Y2V7 657 aa13.58□□□□□ -0.23
FN1-211ENST00000443816 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.23
FN1-211ENST00000443816 HIP1O00291 1037 aa13.58□□□□□ -0.24
FN1-211ENST00000443816 CNNM1Q9NRU3 951 aa13.58□□□□□ -0.24
FN1-211ENST00000443816 SKOR2Q2VWA4 1001 aaPredicted RBP13.58□□□□□ -0.24
FN1-211ENST00000443816 ERC1Q8IUD2 1116 aa13.58□□□□□ -0.24
FN1-211ENST00000443816 RPGRIP1LQ68CZ1 1315 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 ERBINQ96RT1 1412 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 MAGI1Q96QZ7 1491 aaPredicted RBP13.57□□□□□ -0.24
FN1-211ENST00000443816 PSMA5P28066 241 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 FAM135AQ9P2D6 1515 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 TIAM1Q13009 1591 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 EPS15P42566 896 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 MTHFSP49914 203 aa13.57□□□□□ -0.24
FN1-211ENST00000443816 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
FN1-211ENST00000443816 GNAI3P08754 354 aa13.56□□□□□ -0.24
FN1-211ENST00000443816 RBM19Q9Y4C8 960 aaKnown RBP13.56□□□□□ -0.24
FN1-211ENST00000443816 CLASRPQ8N2M8 674 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms