RNA–Protein interactions for RNA: ENST00000443425.6

LRRC49-203, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2 BASIC

Gene LRRC49, Length 3,085 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-203ENST00000443425 RUNDC1Q96C34 613 aa11.34□□□□□ -0.59
LRRC49-203ENST00000443425 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
LRRC49-203ENST00000443425 ABCA8O94911 1581 aa11.34□□□□□ -0.59
LRRC49-203ENST00000443425 RTEL1-TNFRSF6BF6WH68 1400 aa11.34□□□□□ -0.59
LRRC49-203ENST00000443425 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
LRRC49-203ENST00000443425 RRP9O43818 475 aaKnown RBP11.34□□□□□ -0.59
LRRC49-203ENST00000443425 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
LRRC49-203ENST00000443425 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
LRRC49-203ENST00000443425 TRIM27P14373 513 aa11.33□□□□□ -0.6
LRRC49-203ENST00000443425 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.6
LRRC49-203ENST00000443425 CDC42BPBQ9Y5S2 1711 aa11.33□□□□□ -0.6
LRRC49-203ENST00000443425 SYNMO15061 1565 aa11.33□□□□□ -0.6
LRRC49-203ENST00000443425 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
LRRC49-203ENST00000443425 ADGRF5Q8IZF2 1346 aa11.33□□□□□ -0.6
LRRC49-203ENST00000443425 IFT140Q96RY7 1462 aa11.33□□□□□ -0.6
LRRC49-203ENST00000443425 NUP160Q12769 1436 aa11.32□□□□□ -0.6
LRRC49-203ENST00000443425 LAMC1P11047 1609 aa11.32□□□□□ -0.6
LRRC49-203ENST00000443425 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
LRRC49-203ENST00000443425 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
LRRC49-203ENST00000443425 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
LRRC49-203ENST00000443425 C1orf115Q9H7X2 142 aa11.32□□□□□ -0.6
LRRC49-203ENST00000443425 MYOM1P52179 1685 aa11.32□□□□□ -0.6
LRRC49-203ENST00000443425 ARHGEF5Q12774 1597 aa11.32□□□□□ -0.6
LRRC49-203ENST00000443425 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
LRRC49-203ENST00000443425 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
LRRC49-203ENST00000443425 SSH1Q8WYL5 1049 aa11.31□□□□□ -0.6
LRRC49-203ENST00000443425 AK9Q5TCS8 1911 aa11.31□□□□□ -0.6
LRRC49-203ENST00000443425 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
LRRC49-203ENST00000443425 SSFA2P28290 1259 aa11.31□□□□□ -0.6
LRRC49-203ENST00000443425 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
LRRC49-203ENST00000443425 TMEM57Q8N5G2 664 aa11.31□□□□□ -0.6
LRRC49-203ENST00000443425 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
LRRC49-203ENST00000443425 TMEM132EQ6IEE7 984 aa11.3□□□□□ -0.6
LRRC49-203ENST00000443425 NOB1Q9ULX3 412 aaKnown RBP11.3□□□□□ -0.6
LRRC49-203ENST00000443425 RNF17Q9BXT8 1623 aaKnown RBP11.3□□□□□ -0.6
LRRC49-203ENST00000443425 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
LRRC49-203ENST00000443425 RSPH4AQ5TD94 716 aa11.29□□□□□ -0.6
LRRC49-203ENST00000443425 IQGAP1P46940 1657 aa11.29□□□□□ -0.6
LRRC49-203ENST00000443425 ERVK-7P63135 1459 aa11.29□□□□□ -0.6
LRRC49-203ENST00000443425 CHAMP1Q96JM3 812 aa11.28□□□□□ -0.6
LRRC49-203ENST00000443425 UNC13BO14795 1591 aa11.28□□□□□ -0.6
LRRC49-203ENST00000443425 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
LRRC49-203ENST00000443425 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
LRRC49-203ENST00000443425 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
LRRC49-203ENST00000443425 TTC37Q6PGP7 1564 aa11.27□□□□□ -0.6
LRRC49-203ENST00000443425 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.6
LRRC49-203ENST00000443425 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.61
LRRC49-203ENST00000443425 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
LRRC49-203ENST00000443425 IQGAP3Q86VI3 1631 aa11.27□□□□□ -0.61
LRRC49-203ENST00000443425 POLR3AO14802 1390 aaPredicted RBP11.27□□□□□ -0.61
LRRC49-203ENST00000443425 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
LRRC49-203ENST00000443425 KDM5AP29375 1690 aaKnown RBP11.27□□□□□ -0.61
LRRC49-203ENST00000443425 WDR63Q8IWG1 891 aa11.27□□□□□ -0.61
LRRC49-203ENST00000443425 UGGT1Q9NYU2 1555 aa11.26□□□□□ -0.61
LRRC49-203ENST00000443425 ATF7IPQ6VMQ6 1270 aa11.26□□□□□ -0.61
LRRC49-203ENST00000443425 MAST1Q9Y2H9 1570 aa11.26□□□□□ -0.61
LRRC49-203ENST00000443425 ELL2O00472 640 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-203ENST00000443425 RAB3GAP1Q15042 981 aa11.26□□□□□ -0.61
LRRC49-203ENST00000443425 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-203ENST00000443425 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-203ENST00000443425 R3HCC1Q9Y3T6 440 aaKnown RBP11.26□□□□□ -0.61
LRRC49-203ENST00000443425 CEP152O94986 1710 aa11.26□□□□□ -0.61
LRRC49-203ENST00000443425 KIF3BO15066 747 aa11.25□□□□□ -0.61
LRRC49-203ENST00000443425 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
LRRC49-203ENST00000443425 DDIT3P35638 169 aa11.25□□□□□ -0.61
LRRC49-203ENST00000443425 CAVIN1Q6NZI2 390 aaKnown RBP11.25□□□□□ -0.61
LRRC49-203ENST00000443425 CFAP53Q96M91 514 aa11.25□□□□□ -0.61
LRRC49-203ENST00000443425 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
LRRC49-203ENST00000443425 PLXNC1O60486 1568 aa11.25□□□□□ -0.61
LRRC49-203ENST00000443425 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
LRRC49-203ENST00000443425 XPCQ01831 940 aaPredicted RBP11.24□□□□□ -0.61
LRRC49-203ENST00000443425 PKP1Q13835 747 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 MCTP1Q6DN14 999 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 KIF2CQ99661 725 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 ATP10AO60312 1499 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 NGEFQ8N5V2 710 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 TRAPPC8Q9Y2L5 1435 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 MPNDQ8N594 471 aa11.24□□□□□ -0.61
LRRC49-203ENST00000443425 PHF23Q9BUL5 403 aaPredicted RBP11.24□□□□□ -0.61
LRRC49-203ENST00000443425 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
LRRC49-203ENST00000443425 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
LRRC49-203ENST00000443425 HDAC1Q13547 482 aaPredicted RBP11.23□□□□□ -0.61
LRRC49-203ENST00000443425 TPRNQ4KMQ1 711 aa11.23□□□□□ -0.61
LRRC49-203ENST00000443425 TBC1D9Q6ZT07 1266 aa11.23□□□□□ -0.61
LRRC49-203ENST00000443425 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
LRRC49-203ENST00000443425 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
LRRC49-203ENST00000443425 K7ELQ4 463 aaPredicted RBP11.22□□□□□ -0.61
LRRC49-203ENST00000443425 APBB1O00213 710 aa11.22□□□□□ -0.61
LRRC49-203ENST00000443425 RBM25P49756 843 aaKnown RBP11.22□□□□□ -0.61
LRRC49-203ENST00000443425 SPAG9O60271 1321 aaKnown RBP11.22□□□□□ -0.61
LRRC49-203ENST00000443425 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
LRRC49-203ENST00000443425 CLTCL1P53675 1640 aa11.22□□□□□ -0.61
LRRC49-203ENST00000443425 SHPRHQ149N8 1683 aa11.22□□□□□ -0.61
LRRC49-203ENST00000443425 FBLN1P23142 703 aa11.22□□□□□ -0.61
LRRC49-203ENST00000443425 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
LRRC49-203ENST00000443425 ZBTB40Q9NUA8 1239 aa11.22□□□□□ -0.61
LRRC49-203ENST00000443425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
LRRC49-203ENST00000443425 NUCB1Q02818 461 aa11.22□□□□□ -0.61
LRRC49-203ENST00000443425 ZSCAN30Q86W11 494 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms