RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 PCDHB15Q9Y5E8 787 aa18.09■□□□□ 0.49
MCF2L-218ENST00000442625 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
MCF2L-218ENST00000442625 RTEL1-TNFRSF6BF6WH68 1400 aa18.08■□□□□ 0.48
MCF2L-218ENST00000442625 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-218ENST00000442625 SLC12A5Q9H2X9 1139 aa18.07■□□□□ 0.48
MCF2L-218ENST00000442625 RBM10P98175 930 aaKnown RBP18.06■□□□□ 0.48
MCF2L-218ENST00000442625 MORC1Q86VD1 984 aa18.06■□□□□ 0.48
MCF2L-218ENST00000442625 RRAGDQ9NQL2 400 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-218ENST00000442625 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
MCF2L-218ENST00000442625 TET3O43151 1660 aa18.05■□□□□ 0.48
MCF2L-218ENST00000442625 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
MCF2L-218ENST00000442625 FAM43AQ8N2R8 423 aa18.04■□□□□ 0.48
MCF2L-218ENST00000442625 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
MCF2L-218ENST00000442625 PDE3AQ14432 1141 aa18.04■□□□□ 0.48
MCF2L-218ENST00000442625 BECN1Q14457 450 aa18.04■□□□□ 0.48
MCF2L-218ENST00000442625 TMEM132EQ6IEE7 984 aa18.04■□□□□ 0.48
MCF2L-218ENST00000442625 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
MCF2L-218ENST00000442625 TBC1D2Q9BYX2 928 aa18.03■□□□□ 0.48
MCF2L-218ENST00000442625 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
MCF2L-218ENST00000442625 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
MCF2L-218ENST00000442625 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
MCF2L-218ENST00000442625 FANCAO15360 1455 aa18.03■□□□□ 0.48
MCF2L-218ENST00000442625 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
MCF2L-218ENST00000442625 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
MCF2L-218ENST00000442625 MAP3K4Q9Y6R4 1608 aa18.02■□□□□ 0.48
MCF2L-218ENST00000442625 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
MCF2L-218ENST00000442625 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-218ENST00000442625 NOS1P29475 1434 aa18.01■□□□□ 0.47
MCF2L-218ENST00000442625 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-218ENST00000442625 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
MCF2L-218ENST00000442625 NUTM2DQ5VT03 806 aaPredicted RBP18■□□□□ 0.47
MCF2L-218ENST00000442625 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
MCF2L-218ENST00000442625 PANK2Q9BZ23 570 aa18■□□□□ 0.47
MCF2L-218ENST00000442625 MTHFSP49914 203 aa17.99■□□□□ 0.47
MCF2L-218ENST00000442625 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
MCF2L-218ENST00000442625 MYOM2P54296 1465 aa17.99■□□□□ 0.47
MCF2L-218ENST00000442625 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
MCF2L-218ENST00000442625 TBC1D32Q96NH3 1257 aa17.98■□□□□ 0.47
MCF2L-218ENST00000442625 ADGRL1O94910 1474 aa17.98■□□□□ 0.47
MCF2L-218ENST00000442625 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
MCF2L-218ENST00000442625 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
MCF2L-218ENST00000442625 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
MCF2L-218ENST00000442625 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-218ENST00000442625 MROH2AA6NES4 1674 aa17.96■□□□□ 0.47
MCF2L-218ENST00000442625 MROH1Q8NDA8 1641 aa17.96■□□□□ 0.47
MCF2L-218ENST00000442625 UPF2Q9HAU5 1272 aaKnown RBP17.96■□□□□ 0.47
MCF2L-218ENST00000442625 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
MCF2L-218ENST00000442625 VSIG10Q8N0Z9 540 aa17.95■□□□□ 0.46
MCF2L-218ENST00000442625 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
MCF2L-218ENST00000442625 GGT6Q6P531 493 aa17.94■□□□□ 0.46
MCF2L-218ENST00000442625 CHMP4AQ9BY43 222 aa17.94■□□□□ 0.46
MCF2L-218ENST00000442625 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
MCF2L-218ENST00000442625 SAFB2Q14151 953 aaKnown RBP eCLIP17.93■□□□□ 0.46
MCF2L-218ENST00000442625 PMFBP1Q8TBY8 1022 aa17.93■□□□□ 0.46
MCF2L-218ENST00000442625 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-218ENST00000442625 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
MCF2L-218ENST00000442625 NINLQ9Y2I6 1382 aa17.92■□□□□ 0.46
MCF2L-218ENST00000442625 SHPRHQ149N8 1683 aa17.92■□□□□ 0.46
MCF2L-218ENST00000442625 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
MCF2L-218ENST00000442625 ARAP3Q8WWN8 1544 aa17.92■□□□□ 0.46
MCF2L-218ENST00000442625 DHX37Q8IY37 1157 aaKnown RBP17.92■□□□□ 0.46
MCF2L-218ENST00000442625 SBNO2Q9Y2G9 1366 aa17.92■□□□□ 0.46
MCF2L-218ENST00000442625 KIF1BO60333 1816 aa17.92■□□□□ 0.46
MCF2L-218ENST00000442625 TSR2Q969E8 191 aaKnown RBP17.92■□□□□ 0.46
MCF2L-218ENST00000442625 PPRC1Q5VV67 1664 aaKnown RBP17.91■□□□□ 0.46
MCF2L-218ENST00000442625 C14orf93Q9H972 538 aaKnown RBP17.91■□□□□ 0.46
MCF2L-218ENST00000442625 IQSEC2Q5JU85 1478 aa17.9■□□□□ 0.46
MCF2L-218ENST00000442625 NRXN1Q9ULB1 1477 aa17.9■□□□□ 0.46
MCF2L-218ENST00000442625 MCM4P33991 863 aa17.9■□□□□ 0.46
MCF2L-218ENST00000442625 WDR63Q8IWG1 891 aa17.9■□□□□ 0.46
MCF2L-218ENST00000442625 ABCA9Q8IUA7 1624 aa17.89■□□□□ 0.45
MCF2L-218ENST00000442625 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
MCF2L-218ENST00000442625 CFAP65Q6ZU64 1925 aaKnown RBP17.89■□□□□ 0.45
MCF2L-218ENST00000442625 L1TD1Q5T7N2 865 aaKnown RBP17.89■□□□□ 0.45
MCF2L-218ENST00000442625 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
MCF2L-218ENST00000442625 GOLGA6L3A6NEY3 463 aa17.88■□□□□ 0.45
MCF2L-218ENST00000442625 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-218ENST00000442625 NEURL4Q96JN8 1562 aa17.88■□□□□ 0.45
MCF2L-218ENST00000442625 IFT172Q9UG01 1749 aa17.88■□□□□ 0.45
MCF2L-218ENST00000442625 BRD2P25440 801 aaKnown RBP17.87■□□□□ 0.45
MCF2L-218ENST00000442625 C22orf23Q9BZE7 217 aa17.87■□□□□ 0.45
MCF2L-218ENST00000442625 ZNF518AQ6AHZ1 1483 aa17.87■□□□□ 0.45
MCF2L-218ENST00000442625 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
MCF2L-218ENST00000442625 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
MCF2L-218ENST00000442625 NPATQ14207 1427 aa17.86■□□□□ 0.45
MCF2L-218ENST00000442625 ADGRB3O60242 1522 aa17.86■□□□□ 0.45
MCF2L-218ENST00000442625 U2SURPO15042 1029 aaKnown RBP17.85■□□□□ 0.45
MCF2L-218ENST00000442625 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
MCF2L-218ENST00000442625 TRAK2O60296 914 aa17.85■□□□□ 0.45
MCF2L-218ENST00000442625 MVPQ14764 893 aaKnown RBP17.85■□□□□ 0.45
MCF2L-218ENST00000442625 QRICH2Q9H0J4 1663 aa17.85■□□□□ 0.45
MCF2L-218ENST00000442625 NAP1L5Q96NT1 182 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-218ENST00000442625 ADGRB1O14514 1584 aa17.84■□□□□ 0.45
MCF2L-218ENST00000442625 STK26Q9P289 416 aa17.83■□□□□ 0.45
MCF2L-218ENST00000442625 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
MCF2L-218ENST00000442625 EXOSC9Q06265 439 aaKnown RBP17.83■□□□□ 0.44
MCF2L-218ENST00000442625 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
MCF2L-218ENST00000442625 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.44
MCF2L-218ENST00000442625 PAXIP1Q6ZW49 1069 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-218ENST00000442625 ITPRIPQ8IWB1 547 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms