RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SMG6Q86US8 1419 aaKnown RBP17.72■□□□□ 0.43
CPSF4-206ENST00000441580 ABCC11Q96J66 1382 aa17.71■□□□□ 0.43
CPSF4-206ENST00000441580 SUPT16HQ9Y5B9 1047 aaKnown RBP17.71■□□□□ 0.43
CPSF4-206ENST00000441580 ARHGAP23Q9P227 1491 aa17.7■□□□□ 0.42
CPSF4-206ENST00000441580 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
CPSF4-206ENST00000441580 PLEKHG1Q9ULL1 1385 aa17.69■□□□□ 0.42
CPSF4-206ENST00000441580 ADGRB2O60241 1585 aa17.69■□□□□ 0.42
CPSF4-206ENST00000441580 PPP2R1AP30153 589 aa17.68■□□□□ 0.42
CPSF4-206ENST00000441580 ZNF142P52746 1687 aaPredicted RBP17.67■□□□□ 0.42
CPSF4-206ENST00000441580 PRAM1Q96QH2 718 aa17.67■□□□□ 0.42
CPSF4-206ENST00000441580 POGKQ9P215 609 aa17.67■□□□□ 0.42
CPSF4-206ENST00000441580 RIMS1Q86UR5 1692 aaKnown RBP17.67■□□□□ 0.42
CPSF4-206ENST00000441580 STK26Q9P289 416 aa17.66■□□□□ 0.42
CPSF4-206ENST00000441580 ATP7BP35670 1465 aa17.66■□□□□ 0.42
CPSF4-206ENST00000441580 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
CPSF4-206ENST00000441580 MED14O60244 1454 aa17.65■□□□□ 0.42
CPSF4-206ENST00000441580 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
CPSF4-206ENST00000441580 KIF20BQ96Q89 1820 aa17.65■□□□□ 0.42
CPSF4-206ENST00000441580 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
CPSF4-206ENST00000441580 ADAMTS13Q76LX8 1427 aa17.64■□□□□ 0.41
CPSF4-206ENST00000441580 CARD14Q9BXL6 1004 aa17.63■□□□□ 0.41
CPSF4-206ENST00000441580 ADAMTSL3P82987 1691 aa17.63■□□□□ 0.41
CPSF4-206ENST00000441580 SRPK2P78362 688 aaKnown RBP17.62■□□□□ 0.41
CPSF4-206ENST00000441580 WDR43Q15061 677 aaKnown RBP eCLIP17.62■□□□□ 0.41
CPSF4-206ENST00000441580 SIRT1Q96EB6 747 aa17.62■□□□□ 0.41
CPSF4-206ENST00000441580 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
CPSF4-206ENST00000441580 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
CPSF4-206ENST00000441580 POLR3AO14802 1390 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-206ENST00000441580 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
CPSF4-206ENST00000441580 METP08581 1390 aa17.61■□□□□ 0.41
CPSF4-206ENST00000441580 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
CPSF4-206ENST00000441580 SLC12A5Q9H2X9 1139 aa17.6■□□□□ 0.41
CPSF4-206ENST00000441580 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
CPSF4-206ENST00000441580 CD163L1Q9NR16 1453 aa17.59■□□□□ 0.41
CPSF4-206ENST00000441580 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
CPSF4-206ENST00000441580 FKBP8Q14318 412 aa17.59■□□□□ 0.41
CPSF4-206ENST00000441580 ERICH6BQ5W0A0 696 aa17.59■□□□□ 0.41
CPSF4-206ENST00000441580 CABP2Q9NPB3 220 aa17.59■□□□□ 0.41
CPSF4-206ENST00000441580 TERF2IPQ9NYB0 399 aa17.59■□□□□ 0.41
CPSF4-206ENST00000441580 ITSN1Q15811 1721 aa17.58■□□□□ 0.41
CPSF4-206ENST00000441580 CDC42BPGQ6DT37 1551 aa17.58■□□□□ 0.41
CPSF4-206ENST00000441580 PTCH1Q13635 1447 aa17.58■□□□□ 0.41
CPSF4-206ENST00000441580 EID1Q9Y6B2 187 aa17.58■□□□□ 0.4
CPSF4-206ENST00000441580 TOPAZ1Q8N9V7 1692 aa17.58■□□□□ 0.4
CPSF4-206ENST00000441580 MON2Q7Z3U7 1717 aa17.57■□□□□ 0.4
CPSF4-206ENST00000441580 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
CPSF4-206ENST00000441580 PLEKHH1Q9ULM0 1364 aa17.56■□□□□ 0.4
CPSF4-206ENST00000441580 MORC1Q86VD1 984 aa17.56■□□□□ 0.4
CPSF4-206ENST00000441580 HDGFL2Q7Z4V5 671 aaPredicted RBP17.55■□□□□ 0.4
CPSF4-206ENST00000441580 AKAP12Q02952 1782 aa17.55■□□□□ 0.4
CPSF4-206ENST00000441580 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
CPSF4-206ENST00000441580 CDK19Q9BWU1 502 aa17.53■□□□□ 0.4
CPSF4-206ENST00000441580 CEBPAP49715 358 aaPredicted RBP17.52■□□□□ 0.4
CPSF4-206ENST00000441580 THEMISQ8N1K5 641 aaPredicted RBP17.52■□□□□ 0.4
CPSF4-206ENST00000441580 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
CPSF4-206ENST00000441580 BCANQ96GW7 911 aa17.52■□□□□ 0.4
CPSF4-206ENST00000441580 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
CPSF4-206ENST00000441580 EDC4Q6P2E9 1401 aaKnown RBP17.51■□□□□ 0.39
CPSF4-206ENST00000441580 TXNDC2Q86VQ3 553 aa17.51■□□□□ 0.39
CPSF4-206ENST00000441580 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
CPSF4-206ENST00000441580 PIK3R4Q99570 1358 aa17.51■□□□□ 0.39
CPSF4-206ENST00000441580 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
CPSF4-206ENST00000441580 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
CPSF4-206ENST00000441580 NRKQ7Z2Y5 1582 aa17.49■□□□□ 0.39
CPSF4-206ENST00000441580 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
CPSF4-206ENST00000441580 ADAMTS8Q9UP79 889 aa17.49■□□□□ 0.39
CPSF4-206ENST00000441580 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.49■□□□□ 0.39
CPSF4-206ENST00000441580 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
CPSF4-206ENST00000441580 CPSF1Q10570 1443 aaKnown RBP17.48■□□□□ 0.39
CPSF4-206ENST00000441580 LTKP29376 864 aa17.48■□□□□ 0.39
CPSF4-206ENST00000441580 WAPLQ7Z5K2 1190 aa17.48■□□□□ 0.39
CPSF4-206ENST00000441580 IQSEC2Q5JU85 1478 aa17.48■□□□□ 0.39
CPSF4-206ENST00000441580 TBX22Q9Y458 520 aa17.47■□□□□ 0.39
CPSF4-206ENST00000441580 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
CPSF4-206ENST00000441580 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
CPSF4-206ENST00000441580 CABP1Q9NZU7 370 aa17.43■□□□□ 0.38
CPSF4-206ENST00000441580 SETD1BQ9UPS6 1966 aaKnown RBP17.42■□□□□ 0.38
CPSF4-206ENST00000441580 ZNF521Q96K83 1311 aa17.42■□□□□ 0.38
CPSF4-206ENST00000441580 ANKARQ7Z5J8 1434 aa17.4■□□□□ 0.38
CPSF4-206ENST00000441580 CDK12Q9NYV4 1490 aaPredicted RBP17.4■□□□□ 0.38
CPSF4-206ENST00000441580 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
CPSF4-206ENST00000441580 FMN2Q9NZ56 1722 aa17.4■□□□□ 0.38
CPSF4-206ENST00000441580 FYB1O15117 783 aa17.39■□□□□ 0.37
CPSF4-206ENST00000441580 MTHFSP49914 203 aa17.39■□□□□ 0.37
CPSF4-206ENST00000441580 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.37
CPSF4-206ENST00000441580 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
CPSF4-206ENST00000441580 NKTRP30414 1462 aaKnown RBP17.38■□□□□ 0.37
CPSF4-206ENST00000441580 CHD2O14647 1828 aaKnown RBP17.38■□□□□ 0.37
CPSF4-206ENST00000441580 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
CPSF4-206ENST00000441580 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
CPSF4-206ENST00000441580 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
CPSF4-206ENST00000441580 GGNBP2Q9H3C7 697 aa17.38■□□□□ 0.37
CPSF4-206ENST00000441580 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
CPSF4-206ENST00000441580 LRRC7Q96NW7 1537 aa17.37■□□□□ 0.37
CPSF4-206ENST00000441580 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
CPSF4-206ENST00000441580 AATKQ6ZMQ8 1374 aa17.37■□□□□ 0.37
CPSF4-206ENST00000441580 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
CPSF4-206ENST00000441580 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
CPSF4-206ENST00000441580 RUNDC1Q96C34 613 aa17.36■□□□□ 0.37
CPSF4-206ENST00000441580 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms