RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 ARHGAP31Q2M1Z3 1444 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
LINC02048-201ENST00000440556 A0A0U1RQG5 324 aaPredicted RBP17.19■□□□□ 0.34
LINC02048-201ENST00000440556 DMTNQ08495 405 aa17.19■□□□□ 0.34
LINC02048-201ENST00000440556 KNSTRNQ9Y448 316 aa17.19■□□□□ 0.34
LINC02048-201ENST00000440556 R3HCC1Q9Y3T6 440 aaKnown RBP17.18■□□□□ 0.34
LINC02048-201ENST00000440556 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
LINC02048-201ENST00000440556 SYNMO15061 1565 aa17.18■□□□□ 0.34
LINC02048-201ENST00000440556 UQCRHLA0A096LP55 91 aa17.17■□□□□ 0.34
LINC02048-201ENST00000440556 UQCRHP07919 91 aa17.17■□□□□ 0.34
LINC02048-201ENST00000440556 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
LINC02048-201ENST00000440556 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
LINC02048-201ENST00000440556 CCDC94Q9BW85 323 aaPredicted RBP17.17■□□□□ 0.34
LINC02048-201ENST00000440556 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
LINC02048-201ENST00000440556 RBM25P49756 843 aaKnown RBP17.16■□□□□ 0.34
LINC02048-201ENST00000440556 KLHL40Q2TBA0 621 aa17.16■□□□□ 0.34
LINC02048-201ENST00000440556 SASS6Q6UVJ0 657 aa17.16■□□□□ 0.34
LINC02048-201ENST00000440556 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
LINC02048-201ENST00000440556 GTPBP4Q9BZE4 634 aaKnown RBP17.15■□□□□ 0.34
LINC02048-201ENST00000440556 ZNF445P59923 1031 aa17.15■□□□□ 0.34
LINC02048-201ENST00000440556 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
LINC02048-201ENST00000440556 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
LINC02048-201ENST00000440556 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.33
LINC02048-201ENST00000440556 ATP10BO94823 1461 aa17.14■□□□□ 0.33
LINC02048-201ENST00000440556 WDR7Q9Y4E6 1490 aa17.14■□□□□ 0.33
LINC02048-201ENST00000440556 KIF20AO95235 890 aa17.13■□□□□ 0.33
LINC02048-201ENST00000440556 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
LINC02048-201ENST00000440556 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
LINC02048-201ENST00000440556 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
LINC02048-201ENST00000440556 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
LINC02048-201ENST00000440556 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
LINC02048-201ENST00000440556 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
LINC02048-201ENST00000440556 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
LINC02048-201ENST00000440556 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
LINC02048-201ENST00000440556 ZKSCAN5Q9Y2L8 839 aa17.11■□□□□ 0.33
LINC02048-201ENST00000440556 PCDHB15Q9Y5E8 787 aa17.11■□□□□ 0.33
LINC02048-201ENST00000440556 MAGI2Q86UL8 1455 aa17.11■□□□□ 0.33
LINC02048-201ENST00000440556 APAF1O14727 1248 aa17.1■□□□□ 0.33
LINC02048-201ENST00000440556 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
LINC02048-201ENST00000440556 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
LINC02048-201ENST00000440556 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
LINC02048-201ENST00000440556 C9orf84Q5VXU9 1444 aa17.09■□□□□ 0.33
LINC02048-201ENST00000440556 LETM1O95202 739 aaPredicted RBP17.09■□□□□ 0.33
LINC02048-201ENST00000440556 PDE4CQ08493 712 aa17.09■□□□□ 0.33
LINC02048-201ENST00000440556 TAF3Q5VWG9 929 aa17.09■□□□□ 0.33
LINC02048-201ENST00000440556 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
LINC02048-201ENST00000440556 RARSP54136 660 aaKnown RBP17.07■□□□□ 0.32
LINC02048-201ENST00000440556 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
LINC02048-201ENST00000440556 UHRF1BP1LA0JNW5 1464 aa17.07■□□□□ 0.32
LINC02048-201ENST00000440556 A2MP01023 1474 aa17.07■□□□□ 0.32
LINC02048-201ENST00000440556 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
LINC02048-201ENST00000440556 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
LINC02048-201ENST00000440556 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
LINC02048-201ENST00000440556 KANK1Q14678 1352 aa17.05■□□□□ 0.32
LINC02048-201ENST00000440556 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
LINC02048-201ENST00000440556 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
LINC02048-201ENST00000440556 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
LINC02048-201ENST00000440556 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
LINC02048-201ENST00000440556 WDR63Q8IWG1 891 aa17.04■□□□□ 0.32
LINC02048-201ENST00000440556 PRIMPOLQ96LW4 560 aa17.04■□□□□ 0.32
LINC02048-201ENST00000440556 KIF16BQ96L93 1317 aa17.04■□□□□ 0.32
LINC02048-201ENST00000440556 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
LINC02048-201ENST00000440556 WWC1Q8IX03 1113 aa17.03■□□□□ 0.32
LINC02048-201ENST00000440556 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.03■□□□□ 0.32
LINC02048-201ENST00000440556 K7ELQ4 463 aaPredicted RBP17.02■□□□□ 0.32
LINC02048-201ENST00000440556 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
LINC02048-201ENST00000440556 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
LINC02048-201ENST00000440556 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.32
LINC02048-201ENST00000440556 UNC13BO14795 1591 aa17.02■□□□□ 0.32
LINC02048-201ENST00000440556 CT47B1P0C2W7 299 aaPredicted RBP17.02■□□□□ 0.31
LINC02048-201ENST00000440556 MYRIPQ8NFW9 859 aa17.02■□□□□ 0.31
LINC02048-201ENST00000440556 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.31
LINC02048-201ENST00000440556 ZCCHC11Q5TAX3 1644 aaKnown RBP17.02■□□□□ 0.31
LINC02048-201ENST00000440556 BAG4O95429 457 aaKnown RBP17.01■□□□□ 0.31
LINC02048-201ENST00000440556 NUCB2P80303 420 aa17.01■□□□□ 0.31
LINC02048-201ENST00000440556 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
LINC02048-201ENST00000440556 MYOM1P52179 1685 aa17■□□□□ 0.31
LINC02048-201ENST00000440556 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
LINC02048-201ENST00000440556 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
LINC02048-201ENST00000440556 ZSCAN23Q3MJ62 389 aa16.99■□□□□ 0.31
LINC02048-201ENST00000440556 ATP10AO60312 1499 aa16.98■□□□□ 0.31
LINC02048-201ENST00000440556 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
LINC02048-201ENST00000440556 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
LINC02048-201ENST00000440556 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
LINC02048-201ENST00000440556 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
LINC02048-201ENST00000440556 CFAP44Q96MT7 982 aa16.97■□□□□ 0.31
LINC02048-201ENST00000440556 REREQ9P2R6 1566 aa16.97■□□□□ 0.31
LINC02048-201ENST00000440556 RLBP1P12271 317 aa16.97■□□□□ 0.31
LINC02048-201ENST00000440556 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
LINC02048-201ENST00000440556 BBXQ8WY36 941 aaPredicted RBP16.97■□□□□ 0.31
LINC02048-201ENST00000440556 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
LINC02048-201ENST00000440556 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
LINC02048-201ENST00000440556 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
LINC02048-201ENST00000440556 SSFA2P28290 1259 aa16.95■□□□□ 0.3
LINC02048-201ENST00000440556 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms