RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
PCNX3-202ENST00000439247 INSRP06213 1382 aa17.47■□□□□ 0.39
PCNX3-202ENST00000439247 COG6Q9Y2V7 657 aa17.47■□□□□ 0.39
PCNX3-202ENST00000439247 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
PCNX3-202ENST00000439247 TRPM2O94759 1503 aa17.47■□□□□ 0.39
PCNX3-202ENST00000439247 REREQ9P2R6 1566 aa17.46■□□□□ 0.38
PCNX3-202ENST00000439247 CAMSAP1Q5T5Y3 1602 aa17.45■□□□□ 0.38
PCNX3-202ENST00000439247 RSPH6AQ9H0K4 717 aa17.44■□□□□ 0.38
PCNX3-202ENST00000439247 AGLP35573 1532 aa17.44■□□□□ 0.38
PCNX3-202ENST00000439247 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
PCNX3-202ENST00000439247 TNNQ9UQP3 1299 aa17.43■□□□□ 0.38
PCNX3-202ENST00000439247 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
PCNX3-202ENST00000439247 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
PCNX3-202ENST00000439247 EIF3AQ14152 1382 aaKnown RBP17.42■□□□□ 0.38
PCNX3-202ENST00000439247 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
PCNX3-202ENST00000439247 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
PCNX3-202ENST00000439247 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
PCNX3-202ENST00000439247 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
PCNX3-202ENST00000439247 PANK2Q9BZ23 570 aa17.39■□□□□ 0.37
PCNX3-202ENST00000439247 ANTXR1Q9H6X2 564 aa17.39■□□□□ 0.37
PCNX3-202ENST00000439247 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
PCNX3-202ENST00000439247 CLTCQ00610 1675 aaKnown RBP17.39■□□□□ 0.37
PCNX3-202ENST00000439247 BCL2L13Q9BXK5 485 aa17.38■□□□□ 0.37
PCNX3-202ENST00000439247 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
PCNX3-202ENST00000439247 NLRP1Q9C000 1473 aa17.38■□□□□ 0.37
PCNX3-202ENST00000439247 ZC3H13Q5T200 1668 aaKnown RBP17.37■□□□□ 0.37
PCNX3-202ENST00000439247 SYNMO15061 1565 aa17.37■□□□□ 0.37
PCNX3-202ENST00000439247 BECN1Q14457 450 aa17.37■□□□□ 0.37
PCNX3-202ENST00000439247 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
PCNX3-202ENST00000439247 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
PCNX3-202ENST00000439247 NOS1P29475 1434 aa17.37■□□□□ 0.37
PCNX3-202ENST00000439247 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
PCNX3-202ENST00000439247 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCNX3-202ENST00000439247 E9PSI1 815 aa17.35■□□□□ 0.37
PCNX3-202ENST00000439247 ARHGAP31Q2M1Z3 1444 aa17.35■□□□□ 0.37
PCNX3-202ENST00000439247 MROH2AA6NES4 1674 aa17.35■□□□□ 0.37
PCNX3-202ENST00000439247 RLBP1P12271 317 aa17.35■□□□□ 0.37
PCNX3-202ENST00000439247 VIRMAQ69YN4 1812 aaKnown RBP17.35■□□□□ 0.37
PCNX3-202ENST00000439247 CENPJQ9HC77 1338 aaPredicted RBP17.35■□□□□ 0.37
PCNX3-202ENST00000439247 IDI1Q13907 227 aa17.34■□□□□ 0.37
PCNX3-202ENST00000439247 LAMC1P11047 1609 aa17.33■□□□□ 0.37
PCNX3-202ENST00000439247 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.36
PCNX3-202ENST00000439247 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.36
PCNX3-202ENST00000439247 NUTM2DQ5VT03 806 aaPredicted RBP17.32■□□□□ 0.36
PCNX3-202ENST00000439247 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
PCNX3-202ENST00000439247 PREX1Q8TCU6 1659 aa17.32■□□□□ 0.36
PCNX3-202ENST00000439247 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
PCNX3-202ENST00000439247 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
PCNX3-202ENST00000439247 ASXL1Q8IXJ9 1541 aa17.32■□□□□ 0.36
PCNX3-202ENST00000439247 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
PCNX3-202ENST00000439247 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
PCNX3-202ENST00000439247 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
PCNX3-202ENST00000439247 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
PCNX3-202ENST00000439247 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
PCNX3-202ENST00000439247 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
PCNX3-202ENST00000439247 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
PCNX3-202ENST00000439247 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
PCNX3-202ENST00000439247 L1TD1Q5T7N2 865 aaKnown RBP17.3■□□□□ 0.36
PCNX3-202ENST00000439247 NAP1L5Q96NT1 182 aaPredicted RBP17.3■□□□□ 0.36
PCNX3-202ENST00000439247 ERVK-7P63135 1459 aa17.3■□□□□ 0.36
PCNX3-202ENST00000439247 KIF1BO60333 1816 aa17.3■□□□□ 0.36
PCNX3-202ENST00000439247 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
PCNX3-202ENST00000439247 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
PCNX3-202ENST00000439247 ADGRF5Q8IZF2 1346 aa17.29■□□□□ 0.36
PCNX3-202ENST00000439247 ADGRB3O60242 1522 aa17.28■□□□□ 0.36
PCNX3-202ENST00000439247 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
PCNX3-202ENST00000439247 GOLGA6L3A6NEY3 463 aa17.28■□□□□ 0.36
PCNX3-202ENST00000439247 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.35
PCNX3-202ENST00000439247 MCM4P33991 863 aa17.26■□□□□ 0.35
PCNX3-202ENST00000439247 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
PCNX3-202ENST00000439247 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
PCNX3-202ENST00000439247 MADDQ8WXG6 1647 aa17.25■□□□□ 0.35
PCNX3-202ENST00000439247 MYOM1P52179 1685 aa17.24■□□□□ 0.35
PCNX3-202ENST00000439247 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
PCNX3-202ENST00000439247 SLC52A1Q9NWF4 448 aa17.23■□□□□ 0.35
PCNX3-202ENST00000439247 MYO5BQ9ULV0 1848 aa17.23■□□□□ 0.35
PCNX3-202ENST00000439247 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
PCNX3-202ENST00000439247 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
PCNX3-202ENST00000439247 CFAP70Q5T0N1 1121 aa17.22■□□□□ 0.35
PCNX3-202ENST00000439247 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
PCNX3-202ENST00000439247 IQGAP1P46940 1657 aa17.22■□□□□ 0.35
PCNX3-202ENST00000439247 TRAK2O60296 914 aa17.22■□□□□ 0.35
PCNX3-202ENST00000439247 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
PCNX3-202ENST00000439247 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
PCNX3-202ENST00000439247 NEURL4Q96JN8 1562 aa17.21■□□□□ 0.35
PCNX3-202ENST00000439247 SCAF11Q99590 1463 aaKnown RBP17.2■□□□□ 0.34
PCNX3-202ENST00000439247 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
PCNX3-202ENST00000439247 TMEM131LA2VDJ0 1609 aa17.2■□□□□ 0.34
PCNX3-202ENST00000439247 C22orf23Q9BZE7 217 aa17.19■□□□□ 0.34
PCNX3-202ENST00000439247 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
PCNX3-202ENST00000439247 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
PCNX3-202ENST00000439247 FER1L4A9Z1Z3 1794 aa17.18■□□□□ 0.34
PCNX3-202ENST00000439247 PPLO60437 1756 aa17.18■□□□□ 0.34
PCNX3-202ENST00000439247 NEXMIFQ5QGS0 1516 aa17.18■□□□□ 0.34
PCNX3-202ENST00000439247 MYOM2P54296 1465 aa17.18■□□□□ 0.34
PCNX3-202ENST00000439247 CLCN1P35523 988 aa17.16■□□□□ 0.34
PCNX3-202ENST00000439247 TNRQ92752 1358 aa17.16■□□□□ 0.34
PCNX3-202ENST00000439247 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
PCNX3-202ENST00000439247 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
PCNX3-202ENST00000439247 KCNA4P22459 653 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms