RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 TET3O43151 1660 aa6.85□□□□□ -1.31
LINC01239-202ENST00000436786 TMEM94Q12767 1356 aa6.85□□□□□ -1.31
LINC01239-202ENST00000436786 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
LINC01239-202ENST00000436786 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
LINC01239-202ENST00000436786 SLC52A1Q9NWF4 448 aa6.85□□□□□ -1.31
LINC01239-202ENST00000436786 BCANQ96GW7 911 aa6.84□□□□□ -1.31
LINC01239-202ENST00000436786 TRIM35Q9UPQ4 493 aa6.84□□□□□ -1.31
LINC01239-202ENST00000436786 XIRP1Q702N8 1843 aaKnown RBP6.84□□□□□ -1.31
LINC01239-202ENST00000436786 KDM5AP29375 1690 aaKnown RBP6.84□□□□□ -1.31
LINC01239-202ENST00000436786 ANKRD50Q9ULJ7 1429 aa6.84□□□□□ -1.31
LINC01239-202ENST00000436786 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
LINC01239-202ENST00000436786 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
LINC01239-202ENST00000436786 ADGRB3O60242 1522 aa6.84□□□□□ -1.32
LINC01239-202ENST00000436786 FAM135BQ49AJ0 1406 aa6.83□□□□□ -1.32
LINC01239-202ENST00000436786 RGS17Q9UGC6 210 aaPredicted RBP6.83□□□□□ -1.32
LINC01239-202ENST00000436786 HS3ST6Q96QI5 342 aa6.82□□□□□ -1.32
LINC01239-202ENST00000436786 RPRD2Q5VT52 1461 aaKnown RBP6.82□□□□□ -1.32
LINC01239-202ENST00000436786 ZFYVE9O95405 1425 aa6.82□□□□□ -1.32
LINC01239-202ENST00000436786 MAP3K13O43283 966 aa6.81□□□□□ -1.32
LINC01239-202ENST00000436786 PPP1R15AO75807 674 aaPredicted RBP6.81□□□□□ -1.32
LINC01239-202ENST00000436786 CHGAP10645 457 aaKnown RBP6.81□□□□□ -1.32
LINC01239-202ENST00000436786 HDGFP51858 240 aaKnown RBP6.81□□□□□ -1.32
LINC01239-202ENST00000436786 RIMS2Q9UQ26 1411 aa6.81□□□□□ -1.32
LINC01239-202ENST00000436786 PLEKHG1Q9ULL1 1385 aa6.81□□□□□ -1.32
LINC01239-202ENST00000436786 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
LINC01239-202ENST00000436786 SLAIN2Q9P270 581 aa6.81□□□□□ -1.32
LINC01239-202ENST00000436786 TMEM131LA2VDJ0 1609 aa6.8□□□□□ -1.32
LINC01239-202ENST00000436786 NKTRP30414 1462 aaKnown RBP6.8□□□□□ -1.32
LINC01239-202ENST00000436786 NWD1Q149M9 1564 aa6.8□□□□□ -1.32
LINC01239-202ENST00000436786 TRPC6Q9Y210 931 aa6.8□□□□□ -1.32
LINC01239-202ENST00000436786 ROBO1Q9Y6N7 1651 aa6.8□□□□□ -1.32
LINC01239-202ENST00000436786 ITGAEP38570 1179 aa6.79□□□□□ -1.32
LINC01239-202ENST00000436786 PPARGC1BQ86YN6 1023 aaKnown RBP6.79□□□□□ -1.32
LINC01239-202ENST00000436786 TBX22Q9Y458 520 aa6.79□□□□□ -1.32
LINC01239-202ENST00000436786 MSH6P52701 1360 aa6.79□□□□□ -1.32
LINC01239-202ENST00000436786 ROCK1Q13464 1354 aa6.79□□□□□ -1.32
LINC01239-202ENST00000436786 UNC13BO14795 1591 aa6.79□□□□□ -1.32
LINC01239-202ENST00000436786 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC01239-202ENST00000436786 GCC2Q8IWJ2 1684 aa6.79□□□□□ -1.32
LINC01239-202ENST00000436786 POTEAQ6S8J7 498 aa6.78□□□□□ -1.32
LINC01239-202ENST00000436786 MYO5BQ9ULV0 1848 aa6.78□□□□□ -1.32
LINC01239-202ENST00000436786 E9PCH4 1651 aa6.78□□□□□ -1.32
LINC01239-202ENST00000436786 NUP155O75694 1391 aa6.78□□□□□ -1.32
LINC01239-202ENST00000436786 FAM205CA6NFA0 338 aa6.78□□□□□ -1.32
LINC01239-202ENST00000436786 PTGER2P43116 358 aa6.78□□□□□ -1.32
LINC01239-202ENST00000436786 ADAMTS13Q76LX8 1427 aa6.78□□□□□ -1.32
LINC01239-202ENST00000436786 C14orf37Q86TY3 774 aa6.77□□□□□ -1.33
LINC01239-202ENST00000436786 CHD2O14647 1828 aaKnown RBP6.77□□□□□ -1.33
LINC01239-202ENST00000436786 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
LINC01239-202ENST00000436786 PLEKHG5O94827 1062 aa6.76□□□□□ -1.33
LINC01239-202ENST00000436786 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
LINC01239-202ENST00000436786 JCADQ9P266 1359 aa6.76□□□□□ -1.33
LINC01239-202ENST00000436786 AMOTL2Q9Y2J4 779 aa6.76□□□□□ -1.33
LINC01239-202ENST00000436786 PHLPP1O60346 1717 aa6.75□□□□□ -1.33
LINC01239-202ENST00000436786 ATF3P18847 181 aa6.75□□□□□ -1.33
LINC01239-202ENST00000436786 OCEL1Q9H607 264 aa6.75□□□□□ -1.33
LINC01239-202ENST00000436786 C19orf44Q9H6X5 657 aa6.75□□□□□ -1.33
LINC01239-202ENST00000436786 PIK3R4Q99570 1358 aa6.75□□□□□ -1.33
LINC01239-202ENST00000436786 PTPRUQ92729 1446 aa6.75□□□□□ -1.33
LINC01239-202ENST00000436786 CADPS2Q86UW7 1296 aa6.75□□□□□ -1.33
LINC01239-202ENST00000436786 DIP2AQ14689 1571 aa6.74□□□□□ -1.33
LINC01239-202ENST00000436786 TRPM2O94759 1503 aa6.74□□□□□ -1.33
LINC01239-202ENST00000436786 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
LINC01239-202ENST00000436786 COL16A1Q07092 1604 aaPredicted RBP6.73□□□□□ -1.33
LINC01239-202ENST00000436786 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.73□□□□□ -1.33
LINC01239-202ENST00000436786 IRX5P78411 483 aaPredicted RBP6.73□□□□□ -1.33
LINC01239-202ENST00000436786 BRINP3Q76B58 766 aa6.72□□□□□ -1.33
LINC01239-202ENST00000436786 SPATA31A6Q5VVP1 1343 aa6.72□□□□□ -1.33
LINC01239-202ENST00000436786 METP08581 1390 aa6.72□□□□□ -1.33
LINC01239-202ENST00000436786 LRP6O75581 1613 aa6.72□□□□□ -1.33
LINC01239-202ENST00000436786 MEX3CQ5U5Q3 659 aaKnown RBP6.72□□□□□ -1.33
LINC01239-202ENST00000436786 NRXN3Q9Y4C0 1643 aa6.72□□□□□ -1.33
LINC01239-202ENST00000436786 AHDC1Q5TGY3 1603 aaPredicted RBP6.71□□□□□ -1.33
LINC01239-202ENST00000436786 SETBP1Q9Y6X0 1596 aa6.71□□□□□ -1.33
LINC01239-202ENST00000436786 NUTM2BA6NNL0 878 aaPredicted RBP6.71□□□□□ -1.34
LINC01239-202ENST00000436786 NUTM2EB1AL46 878 aaPredicted RBP6.71□□□□□ -1.34
LINC01239-202ENST00000436786 C3orf67Q6ZVT6 689 aa6.71□□□□□ -1.34
LINC01239-202ENST00000436786 NUTM2AQ8IVF1 878 aaPredicted RBP6.71□□□□□ -1.34
LINC01239-202ENST00000436786 PCDHB13Q9Y5F0 798 aa6.71□□□□□ -1.34
LINC01239-202ENST00000436786 SPHKAPQ2M3C7 1700 aa6.7□□□□□ -1.34
LINC01239-202ENST00000436786 XRN1Q8IZH2 1706 aaKnown RBP6.7□□□□□ -1.34
LINC01239-202ENST00000436786 MST1RQ04912 1400 aa6.7□□□□□ -1.34
LINC01239-202ENST00000436786 SPDYE4A6NLX3 237 aa6.7□□□□□ -1.34
LINC01239-202ENST00000436786 ZNF772Q68DY9 489 aaPredicted RBP6.7□□□□□ -1.34
LINC01239-202ENST00000436786 TMEM106CQ9BVX2 250 aa6.7□□□□□ -1.34
LINC01239-202ENST00000436786 CLTCL1P53675 1640 aa6.7□□□□□ -1.34
LINC01239-202ENST00000436786 ASXL1Q8IXJ9 1541 aa6.69□□□□□ -1.34
LINC01239-202ENST00000436786 DCCP43146 1447 aa6.69□□□□□ -1.34
LINC01239-202ENST00000436786 NAIPQ13075 1403 aa6.69□□□□□ -1.34
LINC01239-202ENST00000436786 DDX17Q92841 729 aaKnown RBP6.69□□□□□ -1.34
LINC01239-202ENST00000436786 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
LINC01239-202ENST00000436786 NEXMIFQ5QGS0 1516 aa6.69□□□□□ -1.34
LINC01239-202ENST00000436786 SETD1AO15047 1707 aaKnown RBP6.69□□□□□ -1.34
LINC01239-202ENST00000436786 RRBP1Q9P2E9 1410 aaKnown RBP6.69□□□□□ -1.34
LINC01239-202ENST00000436786 SHPRHQ149N8 1683 aa6.69□□□□□ -1.34
LINC01239-202ENST00000436786 L3MBTL3Q96JM7 780 aaPredicted RBP6.68□□□□□ -1.34
LINC01239-202ENST00000436786 POTEB3A0JP26 581 aa6.68□□□□□ -1.34
LINC01239-202ENST00000436786 POTEBQ6S5H4 581 aa6.68□□□□□ -1.34
LINC01239-202ENST00000436786 SETD5Q9C0A6 1442 aa6.68□□□□□ -1.34
LINC01239-202ENST00000436786 ADGRL3Q9HAR2 1447 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms