RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RIMS1Q86UR5 1692 aaKnown RBP10.01□□□□□ -0.81
LSM3P3-201ENST00000436601 TMEM131LA2VDJ0 1609 aa10□□□□□ -0.81
LSM3P3-201ENST00000436601 NUTM2DQ5VT03 806 aaPredicted RBP10□□□□□ -0.81
LSM3P3-201ENST00000436601 CHADLQ6NUI6 762 aa10□□□□□ -0.81
LSM3P3-201ENST00000436601 MYOM2P54296 1465 aa9.99□□□□□ -0.81
LSM3P3-201ENST00000436601 NRXN1Q9ULB1 1477 aa9.98□□□□□ -0.81
LSM3P3-201ENST00000436601 PSEN1P49768 467 aa9.98□□□□□ -0.81
LSM3P3-201ENST00000436601 NBPF1Q3BBV0 1214 aa9.98□□□□□ -0.81
LSM3P3-201ENST00000436601 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
LSM3P3-201ENST00000436601 PCDHB13Q9Y5F0 798 aa9.98□□□□□ -0.81
LSM3P3-201ENST00000436601 CCDC61Q9Y6R9 512 aa9.98□□□□□ -0.81
LSM3P3-201ENST00000436601 ZFYVE9O95405 1425 aa9.98□□□□□ -0.81
LSM3P3-201ENST00000436601 NEXMIFQ5QGS0 1516 aa9.97□□□□□ -0.81
LSM3P3-201ENST00000436601 CADPS2Q86UW7 1296 aa9.97□□□□□ -0.81
LSM3P3-201ENST00000436601 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
LSM3P3-201ENST00000436601 TMEM2Q9UHN6 1383 aa9.97□□□□□ -0.81
LSM3P3-201ENST00000436601 RIMS2Q9UQ26 1411 aa9.97□□□□□ -0.81
LSM3P3-201ENST00000436601 CFAP70Q5T0N1 1121 aa9.96□□□□□ -0.82
LSM3P3-201ENST00000436601 THEMISQ8N1K5 641 aaPredicted RBP9.96□□□□□ -0.82
LSM3P3-201ENST00000436601 MFRPQ9BY79 579 aa9.96□□□□□ -0.82
LSM3P3-201ENST00000436601 C14orf93Q9H972 538 aaKnown RBP9.96□□□□□ -0.82
LSM3P3-201ENST00000436601 PIK3C2GO75747 1445 aa9.96□□□□□ -0.82
LSM3P3-201ENST00000436601 RALGAPBQ86X10 1494 aa9.96□□□□□ -0.82
LSM3P3-201ENST00000436601 KIF1BO60333 1816 aa9.96□□□□□ -0.82
LSM3P3-201ENST00000436601 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.95□□□□□ -0.82
LSM3P3-201ENST00000436601 GPRASP1Q5JY77 1395 aa9.95□□□□□ -0.82
LSM3P3-201ENST00000436601 CFAP65Q6ZU64 1925 aaKnown RBP9.95□□□□□ -0.82
LSM3P3-201ENST00000436601 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
LSM3P3-201ENST00000436601 ROCK2O75116 1388 aaKnown RBP9.94□□□□□ -0.82
LSM3P3-201ENST00000436601 LTKP29376 864 aa9.94□□□□□ -0.82
LSM3P3-201ENST00000436601 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
LSM3P3-201ENST00000436601 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
LSM3P3-201ENST00000436601 CARD11Q9BXL7 1154 aa9.94□□□□□ -0.82
LSM3P3-201ENST00000436601 ARHGAP23Q9P227 1491 aa9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 PAK3O75914 559 aaPredicted RBP9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 HSPA5P11021 654 aaKnown RBP9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 HIRIP3Q9BW71 556 aaPredicted RBP9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 UBR1Q8IWV7 1749 aa9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 KDM5AP29375 1690 aaKnown RBP9.93□□□□□ -0.82
LSM3P3-201ENST00000436601 CEP170BQ9Y4F5 1589 aaPredicted RBP9.92□□□□□ -0.82
LSM3P3-201ENST00000436601 SLIT1O75093 1534 aa9.92□□□□□ -0.82
LSM3P3-201ENST00000436601 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
LSM3P3-201ENST00000436601 EIF4G2P78344 907 aaKnown RBP eCLIP9.92□□□□□ -0.82
LSM3P3-201ENST00000436601 PPLO60437 1756 aa9.92□□□□□ -0.82
LSM3P3-201ENST00000436601 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
LSM3P3-201ENST00000436601 TMEM132EQ6IEE7 984 aa9.91□□□□□ -0.82
LSM3P3-201ENST00000436601 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.91□□□□□ -0.82
LSM3P3-201ENST00000436601 EID1Q9Y6B2 187 aa9.91□□□□□ -0.82
LSM3P3-201ENST00000436601 TRPM1Q7Z4N2 1603 aa9.91□□□□□ -0.82
LSM3P3-201ENST00000436601 USP47Q96K76 1375 aa9.9□□□□□ -0.82
LSM3P3-201ENST00000436601 SOX12O15370 315 aa9.9□□□□□ -0.82
LSM3P3-201ENST00000436601 LMOD2Q6P5Q4 547 aa9.9□□□□□ -0.82
LSM3P3-201ENST00000436601 ERICH6Q7L0X2 663 aa9.9□□□□□ -0.82
LSM3P3-201ENST00000436601 PLEKHG1Q9ULL1 1385 aa9.89□□□□□ -0.83
LSM3P3-201ENST00000436601 ADGRB1O14514 1584 aa9.89□□□□□ -0.83
LSM3P3-201ENST00000436601 NLRP6P59044 892 aa9.89□□□□□ -0.83
LSM3P3-201ENST00000436601 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
LSM3P3-201ENST00000436601 ANKLE2Q86XL3 938 aa9.89□□□□□ -0.83
LSM3P3-201ENST00000436601 ARHGEF1Q92888 912 aaKnown RBP9.89□□□□□ -0.83
LSM3P3-201ENST00000436601 MYO5BQ9ULV0 1848 aa9.89□□□□□ -0.83
LSM3P3-201ENST00000436601 SCAF11Q99590 1463 aaKnown RBP9.88□□□□□ -0.83
LSM3P3-201ENST00000436601 ST20-MTHFSA0A0A6YYL1 179 aa9.88□□□□□ -0.83
LSM3P3-201ENST00000436601 FXR2P51116 673 aaKnown RBP eCLIP9.88□□□□□ -0.83
LSM3P3-201ENST00000436601 ADAMTS13Q76LX8 1427 aa9.88□□□□□ -0.83
LSM3P3-201ENST00000436601 ZNF142P52746 1687 aaPredicted RBP9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 ALKQ9UM73 1620 aa9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 FBXO22Q8NEZ5 403 aa9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 GTF3C3Q9Y5Q9 886 aa9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 SETBP1Q9Y6X0 1596 aa9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 METP08581 1390 aa9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 ASXL1Q8IXJ9 1541 aa9.87□□□□□ -0.83
LSM3P3-201ENST00000436601 NCKAP5LQ9HCH0 1330 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 MED14O60244 1454 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 LAMC1P11047 1609 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 HSPA2P54652 639 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 SLC26A8Q96RN1 970 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 TESK2Q96S53 571 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 KIAA1210Q9ULL0 1709 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 TRAK1Q9UPV9 953 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 TBX22Q9Y458 520 aa9.86□□□□□ -0.83
LSM3P3-201ENST00000436601 NRXN3Q9Y4C0 1643 aa9.85□□□□□ -0.83
LSM3P3-201ENST00000436601 E2F4Q16254 413 aa9.85□□□□□ -0.83
LSM3P3-201ENST00000436601 EFCAB3Q8N7B9 438 aa9.85□□□□□ -0.83
LSM3P3-201ENST00000436601 STK26Q9P289 416 aa9.85□□□□□ -0.83
LSM3P3-201ENST00000436601 LMTK3Q96Q04 1460 aa9.85□□□□□ -0.83
LSM3P3-201ENST00000436601 YTHDC2Q9H6S0 1430 aaKnown RBP9.84□□□□□ -0.83
LSM3P3-201ENST00000436601 KIF12Q96FN5 646 aa9.84□□□□□ -0.83
LSM3P3-201ENST00000436601 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
LSM3P3-201ENST00000436601 LRPPRCP42704 1394 aaKnown RBP9.84□□□□□ -0.83
LSM3P3-201ENST00000436601 MAP3K13O43283 966 aa9.83□□□□□ -0.84
LSM3P3-201ENST00000436601 PPP1R37O75864 691 aa9.83□□□□□ -0.84
LSM3P3-201ENST00000436601 ABCC11Q96J66 1382 aa9.83□□□□□ -0.84
LSM3P3-201ENST00000436601 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
LSM3P3-201ENST00000436601 NPHP4O75161 1426 aaPredicted RBP9.82□□□□□ -0.84
LSM3P3-201ENST00000436601 EIF3AQ14152 1382 aaKnown RBP9.82□□□□□ -0.84
LSM3P3-201ENST00000436601 PTPRUQ92729 1446 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms