RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 SCUBE3Q8IX30 993 aa10.02□□□□□ -0.81
GTF3C3-204ENST00000435252 LIMD1Q9UGP4 676 aa10.02□□□□□ -0.81
GTF3C3-204ENST00000435252 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
GTF3C3-204ENST00000435252 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
GTF3C3-204ENST00000435252 GUCA2AQ02747 115 aa10.01□□□□□ -0.81
GTF3C3-204ENST00000435252 KCNC4Q03721 635 aa10.01□□□□□ -0.81
GTF3C3-204ENST00000435252 CSPP1Q1MSJ5 1256 aa10.01□□□□□ -0.81
GTF3C3-204ENST00000435252 NUTM2DQ5VT03 806 aaPredicted RBP10.01□□□□□ -0.81
GTF3C3-204ENST00000435252 NUTM2AQ8IVF1 878 aaPredicted RBP10.01□□□□□ -0.81
GTF3C3-204ENST00000435252 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
GTF3C3-204ENST00000435252 HLA-CQ95604 372 aa10□□□□□ -0.81
GTF3C3-204ENST00000435252 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
GTF3C3-204ENST00000435252 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.99□□□□□ -0.81
GTF3C3-204ENST00000435252 ADH1BP00325 375 aa9.98□□□□□ -0.81
GTF3C3-204ENST00000435252 SPSB2Q99619 263 aa9.98□□□□□ -0.81
GTF3C3-204ENST00000435252 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
GTF3C3-204ENST00000435252 HELBQ8NG08 1087 aaPredicted RBP9.97□□□□□ -0.81
GTF3C3-204ENST00000435252 USB1Q9BQ65 265 aaKnown RBP9.97□□□□□ -0.81
GTF3C3-204ENST00000435252 LILRB3O75022 631 aa9.96□□□□□ -0.82
GTF3C3-204ENST00000435252 HRCP23327 699 aa9.96□□□□□ -0.82
GTF3C3-204ENST00000435252 BRICD5Q6PL45 260 aa9.96□□□□□ -0.82
GTF3C3-204ENST00000435252 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
GTF3C3-204ENST00000435252 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.82
GTF3C3-204ENST00000435252 GGCXP38435 758 aa9.95□□□□□ -0.82
GTF3C3-204ENST00000435252 MSS51Q4VC12 460 aa9.95□□□□□ -0.82
GTF3C3-204ENST00000435252 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
GTF3C3-204ENST00000435252 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
GTF3C3-204ENST00000435252 QPCTQ16769 361 aa9.94□□□□□ -0.82
GTF3C3-204ENST00000435252 THAP11Q96EK4 314 aa9.94□□□□□ -0.82
GTF3C3-204ENST00000435252 TLL1O43897 1013 aa9.93□□□□□ -0.82
GTF3C3-204ENST00000435252 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
GTF3C3-204ENST00000435252 DESI1Q6ICB0 168 aa9.92□□□□□ -0.82
GTF3C3-204ENST00000435252 PRR7Q8TB68 274 aa9.92□□□□□ -0.82
GTF3C3-204ENST00000435252 CABLES1Q8TDN4 633 aa9.92□□□□□ -0.82
GTF3C3-204ENST00000435252 TSC1Q92574 1164 aa9.92□□□□□ -0.82
GTF3C3-204ENST00000435252 SLC6A16Q9GZN6 736 aa9.92□□□□□ -0.82
GTF3C3-204ENST00000435252 RGS20O76081 388 aa9.91□□□□□ -0.82
GTF3C3-204ENST00000435252 RFC5P40937 340 aa9.91□□□□□ -0.82
GTF3C3-204ENST00000435252 TMEM259Q4ZIN3 620 aa9.91□□□□□ -0.82
GTF3C3-204ENST00000435252 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
GTF3C3-204ENST00000435252 APBB1O00213 710 aa9.89□□□□□ -0.83
GTF3C3-204ENST00000435252 JUNDP17535 347 aa9.89□□□□□ -0.83
GTF3C3-204ENST00000435252 RTL5Q5HYW3 569 aaPredicted RBP9.88□□□□□ -0.83
GTF3C3-204ENST00000435252 A0A0G2JS52 829 aa9.87□□□□□ -0.83
GTF3C3-204ENST00000435252 CFAP99D6REC4 459 aa9.86□□□□□ -0.83
GTF3C3-204ENST00000435252 AP1G2O75843 785 aa9.86□□□□□ -0.83
GTF3C3-204ENST00000435252 MMP16P51512 607 aa9.86□□□□□ -0.83
GTF3C3-204ENST00000435252 PTPRNQ16849 979 aa9.86□□□□□ -0.83
GTF3C3-204ENST00000435252 FAM160A2Q8N612 972 aaPredicted RBP9.86□□□□□ -0.83
GTF3C3-204ENST00000435252 BANK1Q8NDB2 785 aa9.86□□□□□ -0.83
GTF3C3-204ENST00000435252 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
GTF3C3-204ENST00000435252 S1PR4O95977 384 aa9.85□□□□□ -0.83
GTF3C3-204ENST00000435252 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
GTF3C3-204ENST00000435252 FLIIQ13045 1269 aa9.83□□□□□ -0.84
GTF3C3-204ENST00000435252 PRDM9Q9NQV7 894 aa9.83□□□□□ -0.84
GTF3C3-204ENST00000435252 USP17L8P0C7I0 530 aa9.82□□□□□ -0.84
GTF3C3-204ENST00000435252 PNMA1Q8ND90 353 aa9.82□□□□□ -0.84
GTF3C3-204ENST00000435252 NUDT12Q9BQG2 462 aa9.82□□□□□ -0.84
GTF3C3-204ENST00000435252 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
GTF3C3-204ENST00000435252 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.82□□□□□ -0.84
GTF3C3-204ENST00000435252 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
GTF3C3-204ENST00000435252 CCNYL3P0C7X3 344 aa9.81□□□□□ -0.84
GTF3C3-204ENST00000435252 LYPD8Q6UX82 237 aa9.81□□□□□ -0.84
GTF3C3-204ENST00000435252 ANKLE1Q8NAG6 615 aa9.81□□□□□ -0.84
GTF3C3-204ENST00000435252 SOCS7O14512 581 aa9.8□□□□□ -0.84
GTF3C3-204ENST00000435252 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
GTF3C3-204ENST00000435252 CCDC24Q8N4L8 307 aa9.79□□□□□ -0.84
GTF3C3-204ENST00000435252 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
GTF3C3-204ENST00000435252 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
GTF3C3-204ENST00000435252 ZBTB24O43167 697 aaPredicted RBP9.78□□□□□ -0.84
GTF3C3-204ENST00000435252 CTDSPL2Q05D32 466 aa9.78□□□□□ -0.84
GTF3C3-204ENST00000435252 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
GTF3C3-204ENST00000435252 CTHP32929 405 aa9.77□□□□□ -0.85
GTF3C3-204ENST00000435252 ERICH6Q7L0X2 663 aa9.77□□□□□ -0.85
GTF3C3-204ENST00000435252 ARMC2Q8NEN0 867 aa9.76□□□□□ -0.85
GTF3C3-204ENST00000435252 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
GTF3C3-204ENST00000435252 EVA1BQ9NVM1 165 aa9.75□□□□□ -0.85
GTF3C3-204ENST00000435252 PER1O15534 1290 aaPredicted RBP9.74□□□□□ -0.85
GTF3C3-204ENST00000435252 MCM6Q14566 821 aa9.74□□□□□ -0.85
GTF3C3-204ENST00000435252 F12P00748 615 aaPredicted RBP9.73□□□□□ -0.85
GTF3C3-204ENST00000435252 LRRN4Q8WUT4 740 aa9.73□□□□□ -0.85
GTF3C3-204ENST00000435252 PPEF1O14829 653 aaPredicted RBP9.72□□□□□ -0.85
GTF3C3-204ENST00000435252 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
GTF3C3-204ENST00000435252 RAD21O60216 631 aa9.71□□□□□ -0.86
GTF3C3-204ENST00000435252 UBTFP17480 764 aaKnown RBP9.71□□□□□ -0.86
GTF3C3-204ENST00000435252 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
GTF3C3-204ENST00000435252 MAP10Q9P2G4 905 aa9.71□□□□□ -0.86
GTF3C3-204ENST00000435252 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
GTF3C3-204ENST00000435252 RPIAP49247 311 aa9.7□□□□□ -0.86
GTF3C3-204ENST00000435252 WWC1Q8IX03 1113 aa9.7□□□□□ -0.86
GTF3C3-204ENST00000435252 MTMR14Q8NCE2 650 aa9.7□□□□□ -0.86
GTF3C3-204ENST00000435252 GPKOWQ92917 476 aaPredicted RBP eCLIP9.7□□□□□ -0.86
GTF3C3-204ENST00000435252 UNC93B1Q9H1C4 597 aa9.7□□□□□ -0.86
GTF3C3-204ENST00000435252 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
GTF3C3-204ENST00000435252 NR6A1Q15406 480 aa9.69□□□□□ -0.86
GTF3C3-204ENST00000435252 CD2BP2O95400 341 aaKnown RBP9.68□□□□□ -0.86
GTF3C3-204ENST00000435252 HMX1Q9NP08 348 aaPredicted RBP9.68□□□□□ -0.86
GTF3C3-204ENST00000435252 V9GY48 417 aaPredicted RBP9.68□□□□□ -0.86
GTF3C3-204ENST00000435252 FKBPLQ9UIM3 349 aa9.67□□□□□ -0.86
GTF3C3-204ENST00000435252 SLC19A1P41440 591 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms