RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 SETQ01105 290 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-205ENST00000435213 CERS3Q8IU89 383 aa9.19□□□□□ -0.94
GARNL3-205ENST00000435213 EIF2AK4Q9P2K8 1649 aaKnown RBP9.19□□□□□ -0.94
GARNL3-205ENST00000435213 PRDM15P57071 1507 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-205ENST00000435213 TMEM132AQ24JP5 1023 aa9.18□□□□□ -0.94
GARNL3-205ENST00000435213 MYO5CQ9NQX4 1742 aa9.18□□□□□ -0.94
GARNL3-205ENST00000435213 SOX12O15370 315 aa9.18□□□□□ -0.94
GARNL3-205ENST00000435213 CARD10Q9BWT7 1032 aa9.18□□□□□ -0.94
GARNL3-205ENST00000435213 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
GARNL3-205ENST00000435213 CFAP44Q96MT7 982 aa9.17□□□□□ -0.94
GARNL3-205ENST00000435213 CFDP1Q9UEE9 299 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-205ENST00000435213 UHRF1BP1LA0JNW5 1464 aa9.17□□□□□ -0.94
GARNL3-205ENST00000435213 PRAG1Q86YV5 1406 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 ARHGEF5Q12774 1597 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 UQCRHLA0A096LP55 91 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 CCDC66A2RUB6 948 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 ZBTB22O15209 634 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 UQCRHP07919 91 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 KCNJ4P48050 445 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 PRG4Q92954 1404 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-205ENST00000435213 GPRASP1Q5JY77 1395 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 MSNP26038 577 aaKnown RBP9.16□□□□□ -0.94
GARNL3-205ENST00000435213 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 OS9Q13438 667 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-205ENST00000435213 NUP155O75694 1391 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 NBPF20Q3BBV1 942 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 PANK2Q9BZ23 570 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
GARNL3-205ENST00000435213 R3HCC1Q9Y3T6 440 aaKnown RBP9.15□□□□□ -0.94
GARNL3-205ENST00000435213 ERBB4Q15303 1308 aa9.15□□□□□ -0.94
GARNL3-205ENST00000435213 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.95
GARNL3-205ENST00000435213 PLIN1O60240 522 aa9.15□□□□□ -0.95
GARNL3-205ENST00000435213 RNF17Q9BXT8 1623 aaKnown RBP9.15□□□□□ -0.95
GARNL3-205ENST00000435213 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
GARNL3-205ENST00000435213 EIF3AQ14152 1382 aaKnown RBP9.14□□□□□ -0.95
GARNL3-205ENST00000435213 LMOD3Q0VAK6 560 aa9.14□□□□□ -0.95
GARNL3-205ENST00000435213 ZSCAN30Q86W11 494 aa9.14□□□□□ -0.95
GARNL3-205ENST00000435213 EGFL6Q8IUX8 553 aa9.14□□□□□ -0.95
GARNL3-205ENST00000435213 BANK1Q8NDB2 785 aa9.14□□□□□ -0.95
GARNL3-205ENST00000435213 HSP90AB3PQ58FF7 597 aa9.14□□□□□ -0.95
GARNL3-205ENST00000435213 PUS7Q96PZ0 661 aaKnown RBP9.14□□□□□ -0.95
GARNL3-205ENST00000435213 KCNA4P22459 653 aa9.13□□□□□ -0.95
GARNL3-205ENST00000435213 ABCC10Q5T3U5 1492 aa9.13□□□□□ -0.95
GARNL3-205ENST00000435213 FAM135AQ9P2D6 1515 aa9.13□□□□□ -0.95
GARNL3-205ENST00000435213 BECN1Q14457 450 aa9.13□□□□□ -0.95
GARNL3-205ENST00000435213 ZNF771Q7L3S4 317 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-205ENST00000435213 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-205ENST00000435213 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
GARNL3-205ENST00000435213 UNC13BO14795 1591 aa9.13□□□□□ -0.95
GARNL3-205ENST00000435213 JPH4Q96JJ6 628 aa9.12□□□□□ -0.95
GARNL3-205ENST00000435213 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
GARNL3-205ENST00000435213 TIGD1Q96MW7 591 aa9.12□□□□□ -0.95
GARNL3-205ENST00000435213 GRPEL1Q9HAV7 217 aa9.12□□□□□ -0.95
GARNL3-205ENST00000435213 ERBINQ96RT1 1412 aa9.11□□□□□ -0.95
GARNL3-205ENST00000435213 KIF3AQ9Y496 699 aa9.11□□□□□ -0.95
GARNL3-205ENST00000435213 CBX1P83916 185 aa9.11□□□□□ -0.95
GARNL3-205ENST00000435213 NBPF1Q3BBV0 1214 aa9.11□□□□□ -0.95
GARNL3-205ENST00000435213 SKAP1Q86WV1 359 aa9.11□□□□□ -0.95
GARNL3-205ENST00000435213 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
GARNL3-205ENST00000435213 CCDC141Q6ZP82 1450 aa9.1□□□□□ -0.95
GARNL3-205ENST00000435213 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
GARNL3-205ENST00000435213 TRHP20396 242 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-205ENST00000435213 C20orf194Q5TEA3 1177 aa9.1□□□□□ -0.95
GARNL3-205ENST00000435213 DISP3Q9P2K9 1392 aa9.1□□□□□ -0.95
GARNL3-205ENST00000435213 CCDC144AA2RUR9 1427 aa9.1□□□□□ -0.95
GARNL3-205ENST00000435213 A2MP01023 1474 aa9.1□□□□□ -0.95
GARNL3-205ENST00000435213 SYNMO15061 1565 aa9.1□□□□□ -0.95
GARNL3-205ENST00000435213 TRIM6-TRIM34B2RNG4 842 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 PLXNC1O60486 1568 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 TRIM34Q9BYJ4 488 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 IQGAP1P46940 1657 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 IQGAP3Q86VI3 1631 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 ABCC2Q92887 1545 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 ZNF521Q96K83 1311 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 TNNT3P45378 269 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-205ENST00000435213 DUSP27Q5VZP5 1158 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 MAST1Q9Y2H9 1570 aa9.09□□□□□ -0.95
GARNL3-205ENST00000435213 GPATCH11Q8N954 259 aa9.08□□□□□ -0.96
GARNL3-205ENST00000435213 PLB1Q6P1J6 1458 aa9.08□□□□□ -0.96
GARNL3-205ENST00000435213 SASS6Q6UVJ0 657 aa9.08□□□□□ -0.96
GARNL3-205ENST00000435213 ZNF777Q9ULD5 760 aaPredicted RBP9.08□□□□□ -0.96
GARNL3-205ENST00000435213 PLEKHH1Q9ULM0 1364 aa9.08□□□□□ -0.96
GARNL3-205ENST00000435213 CCDC173Q0VFZ6 552 aa9.08□□□□□ -0.96
GARNL3-205ENST00000435213 MYCBPQ99417 103 aaPredicted RBP9.08□□□□□ -0.96
GARNL3-205ENST00000435213 PREX2Q70Z35 1606 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 ARAP3Q8WWN8 1544 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 SATB1Q01826 763 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 TESK2Q96S53 571 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 NINLQ9Y2I6 1382 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 ANAPC15P60006 121 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 CALCOCO1Q9P1Z2 691 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 TMF1P82094 1093 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 GOLGA2Q08379 1002 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 PIK3C2GO75747 1445 aa9.07□□□□□ -0.96
GARNL3-205ENST00000435213 NKTRP30414 1462 aaKnown RBP9.06□□□□□ -0.96
GARNL3-205ENST00000435213 LOC102724159A0A0B4J2E5 919 aa9.06□□□□□ -0.96
GARNL3-205ENST00000435213 PWP2Q15269 919 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms