RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
SCAF4-203ENST00000434667 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-203ENST00000434667 ARHGEF28Q8N1W1 1705 aaKnown RBP13.46□□□□□ -0.25
SCAF4-203ENST00000434667 KDM5AP29375 1690 aaKnown RBP13.46□□□□□ -0.25
SCAF4-203ENST00000434667 RLBP1P12271 317 aa13.46□□□□□ -0.26
SCAF4-203ENST00000434667 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.26
SCAF4-203ENST00000434667 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
SCAF4-203ENST00000434667 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
SCAF4-203ENST00000434667 ZNF521Q96K83 1311 aa13.45□□□□□ -0.26
SCAF4-203ENST00000434667 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
SCAF4-203ENST00000434667 HSP90AA1P07900 732 aaKnown RBP13.44□□□□□ -0.26
SCAF4-203ENST00000434667 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
SCAF4-203ENST00000434667 GLIPR1L2Q4G1C9 344 aa13.43□□□□□ -0.26
SCAF4-203ENST00000434667 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
SCAF4-203ENST00000434667 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
SCAF4-203ENST00000434667 FANCAO15360 1455 aa13.42□□□□□ -0.26
SCAF4-203ENST00000434667 XRCC6P12956 609 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCAF4-203ENST00000434667 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
SCAF4-203ENST00000434667 MFAP1P55081 439 aaKnown RBP13.41□□□□□ -0.26
SCAF4-203ENST00000434667 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
SCAF4-203ENST00000434667 PDZRN3Q9UPQ7 1066 aa13.4□□□□□ -0.26
SCAF4-203ENST00000434667 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
SCAF4-203ENST00000434667 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-203ENST00000434667 GLI2P10070 1586 aa13.39□□□□□ -0.27
SCAF4-203ENST00000434667 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 ANTXR1Q9H6X2 564 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 MLH3Q9UHC1 1453 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
SCAF4-203ENST00000434667 BECN1Q14457 450 aa13.37□□□□□ -0.27
SCAF4-203ENST00000434667 WWC1Q8IX03 1113 aa13.36□□□□□ -0.27
SCAF4-203ENST00000434667 ABCC3O15438 1527 aa13.36□□□□□ -0.27
SCAF4-203ENST00000434667 NPC1L1Q9UHC9 1359 aa13.36□□□□□ -0.27
SCAF4-203ENST00000434667 NEXMIFQ5QGS0 1516 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 UGGT1Q9NYU2 1555 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
SCAF4-203ENST00000434667 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
SCAF4-203ENST00000434667 NKTRP30414 1462 aaKnown RBP13.35□□□□□ -0.27
SCAF4-203ENST00000434667 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 E9PSI1 815 aa13.34□□□□□ -0.27
SCAF4-203ENST00000434667 ERVK-7P63135 1459 aa13.34□□□□□ -0.27
SCAF4-203ENST00000434667 GOLGA6L3A6NEY3 463 aa13.34□□□□□ -0.27
SCAF4-203ENST00000434667 TSR2Q969E8 191 aaKnown RBP13.34□□□□□ -0.27
SCAF4-203ENST00000434667 NCLP19338 710 aaKnown RBP13.33□□□□□ -0.27
SCAF4-203ENST00000434667 SBNO2Q9Y2G9 1366 aa13.33□□□□□ -0.28
SCAF4-203ENST00000434667 ADGRB2O60241 1585 aa13.33□□□□□ -0.28
SCAF4-203ENST00000434667 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
SCAF4-203ENST00000434667 TBC1D32Q96NH3 1257 aa13.32□□□□□ -0.28
SCAF4-203ENST00000434667 MCM4P33991 863 aa13.32□□□□□ -0.28
SCAF4-203ENST00000434667 RARSP54136 660 aaKnown RBP13.32□□□□□ -0.28
SCAF4-203ENST00000434667 PREX1Q8TCU6 1659 aa13.32□□□□□ -0.28
SCAF4-203ENST00000434667 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 TCP11L2Q8N4U5 519 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 TRIM44Q96DX7 344 aaPredicted RBP13.31□□□□□ -0.28
SCAF4-203ENST00000434667 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
SCAF4-203ENST00000434667 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
SCAF4-203ENST00000434667 TRAK2O60296 914 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 POGZQ7Z3K3 1410 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 RIMBP3CA6NJZ7 1639 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 RIMBP3BA6NNM3 1639 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 RIMBP3Q9UFD9 1639 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
SCAF4-203ENST00000434667 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-203ENST00000434667 NLRP1Q9C000 1473 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 CGNL1Q0VF96 1302 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 NOS1P29475 1434 aa13.29□□□□□ -0.28
SCAF4-203ENST00000434667 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCAF4-203ENST00000434667 C22orf23Q9BZE7 217 aa13.28□□□□□ -0.28
SCAF4-203ENST00000434667 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
SCAF4-203ENST00000434667 L1TD1Q5T7N2 865 aaKnown RBP13.27□□□□□ -0.28
SCAF4-203ENST00000434667 PDE3AQ14432 1141 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 GAS2L3Q86XJ1 694 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 TRAK1Q9UPV9 953 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 NRXN3Q9Y4C0 1643 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 ARHGAP31Q2M1Z3 1444 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 ASXL2Q76L83 1435 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
SCAF4-203ENST00000434667 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
SCAF4-203ENST00000434667 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 MTHFSP49914 203 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 LNPKQ9C0E8 428 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 ADGRL1O94910 1474 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
SCAF4-203ENST00000434667 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
SCAF4-203ENST00000434667 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
SCAF4-203ENST00000434667 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.299e-23■■■■□ 19.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms