RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
FAM3A-212ENST00000434658 TMEM94Q12767 1356 aa25.21■■□□□ 1.63
FAM3A-212ENST00000434658 TMEM132EQ6IEE7 984 aa25.19■■□□□ 1.62
FAM3A-212ENST00000434658 NBPF1Q3BBV0 1214 aa25.18■■□□□ 1.62
FAM3A-212ENST00000434658 FBXO41Q8TF61 875 aa25.18■■□□□ 1.62
FAM3A-212ENST00000434658 XRN1Q8IZH2 1706 aaKnown RBP25.16■■□□□ 1.62
FAM3A-212ENST00000434658 XIRP1Q702N8 1843 aaKnown RBP25.16■■□□□ 1.62
FAM3A-212ENST00000434658 UBAP1LF5GYI3 381 aa25.14■■□□□ 1.61
FAM3A-212ENST00000434658 ERICH6BQ5W0A0 696 aa25.14■■□□□ 1.61
FAM3A-212ENST00000434658 STK26Q9P289 416 aa25.14■■□□□ 1.61
FAM3A-212ENST00000434658 RALBP1Q15311 655 aa25.12■■□□□ 1.61
FAM3A-212ENST00000434658 ASXL1Q8IXJ9 1541 aa25.12■■□□□ 1.61
FAM3A-212ENST00000434658 C14orf37Q86TY3 774 aa25.12■■□□□ 1.61
FAM3A-212ENST00000434658 BRD4O60885 1362 aaPredicted RBP25.11■■□□□ 1.61
FAM3A-212ENST00000434658 LRPPRCP42704 1394 aaKnown RBP25.1■■□□□ 1.61
FAM3A-212ENST00000434658 TOM1O60784 492 aa25.1■■□□□ 1.61
FAM3A-212ENST00000434658 NCOA3Q9Y6Q9 1424 aa25.1■■□□□ 1.61
FAM3A-212ENST00000434658 MYBBP1AQ9BQG0 1328 aaKnown RBP25.1■■□□□ 1.61
FAM3A-212ENST00000434658 TESK2Q96S53 571 aa25.09■■□□□ 1.61
FAM3A-212ENST00000434658 YTHDC2Q9H6S0 1430 aaKnown RBP25.09■■□□□ 1.61
FAM3A-212ENST00000434658 ROBO2Q9HCK4 1378 aa25.09■■□□□ 1.61
FAM3A-212ENST00000434658 PNISRQ8TF01 805 aaKnown RBP25.09■■□□□ 1.61
FAM3A-212ENST00000434658 ILDR1Q86SU0 546 aaPredicted RBP25.08■■□□□ 1.61
FAM3A-212ENST00000434658 ABCC11Q96J66 1382 aa25.08■■□□□ 1.6
FAM3A-212ENST00000434658 PTCH1Q13635 1447 aa25.07■■□□□ 1.6
FAM3A-212ENST00000434658 MSH6P52701 1360 aa25.07■■□□□ 1.6
FAM3A-212ENST00000434658 KIAA1210Q9ULL0 1709 aa25.07■■□□□ 1.6
FAM3A-212ENST00000434658 SMG6Q86US8 1419 aaKnown RBP25.07■■□□□ 1.6
FAM3A-212ENST00000434658 CNGB1Q14028 1251 aaPredicted RBP25.06■■□□□ 1.6
FAM3A-212ENST00000434658 DISP3Q9P2K9 1392 aa25.06■■□□□ 1.6
FAM3A-212ENST00000434658 TMC1Q8TDI8 760 aa25.05■■□□□ 1.6
FAM3A-212ENST00000434658 C19orf44Q9H6X5 657 aa25.05■■□□□ 1.6
FAM3A-212ENST00000434658 PARD3Q8TEW0 1356 aa25.05■■□□□ 1.6
FAM3A-212ENST00000434658 ADGRB1O14514 1584 aa25.05■■□□□ 1.6
FAM3A-212ENST00000434658 TECPR2O15040 1411 aa25.04■■□□□ 1.6
FAM3A-212ENST00000434658 PIP4K2BP78356 416 aa25.02■■□□□ 1.6
FAM3A-212ENST00000434658 WAPLQ7Z5K2 1190 aa25.02■■□□□ 1.6
FAM3A-212ENST00000434658 PER1O15534 1290 aaPredicted RBP25.01■■□□□ 1.59
FAM3A-212ENST00000434658 KNDC1Q76NI1 1749 aa25.01■■□□□ 1.59
FAM3A-212ENST00000434658 SIRT1Q96EB6 747 aa25■■□□□ 1.59
FAM3A-212ENST00000434658 TRAK1Q9UPV9 953 aa25■■□□□ 1.59
FAM3A-212ENST00000434658 IRX6P78412 446 aaPredicted RBP25■■□□□ 1.59
FAM3A-212ENST00000434658 TMF1P82094 1093 aa25■■□□□ 1.59
FAM3A-212ENST00000434658 ATF3P18847 181 aa24.99■■□□□ 1.59
FAM3A-212ENST00000434658 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.98■■□□□ 1.59
FAM3A-212ENST00000434658 CADPS2Q86UW7 1296 aa24.98■■□□□ 1.59
FAM3A-212ENST00000434658 PLEKHH1Q9ULM0 1364 aa24.97■■□□□ 1.59
FAM3A-212ENST00000434658 ADGRL3Q9HAR2 1447 aa24.97■■□□□ 1.59
FAM3A-212ENST00000434658 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
FAM3A-212ENST00000434658 NLRP13Q86W25 1043 aa24.96■■□□□ 1.59
FAM3A-212ENST00000434658 PRAM1Q96QH2 718 aa24.96■■□□□ 1.59
FAM3A-212ENST00000434658 SLAIN2Q9P270 581 aa24.96■■□□□ 1.59
FAM3A-212ENST00000434658 NUDCQ9Y266 331 aa24.96■■□□□ 1.59
FAM3A-212ENST00000434658 PPP4R2Q9NY27 417 aa24.95■■□□□ 1.58
FAM3A-212ENST00000434658 POGKQ9P215 609 aa24.95■■□□□ 1.58
FAM3A-212ENST00000434658 NALCNQ8IZF0 1738 aa24.95■■□□□ 1.58
FAM3A-212ENST00000434658 DLC1Q96QB1 1528 aa24.94■■□□□ 1.58
FAM3A-212ENST00000434658 SAFB2Q14151 953 aaKnown RBP eCLIP24.93■■□□□ 1.58
FAM3A-212ENST00000434658 DCCP43146 1447 aa24.93■■□□□ 1.58
FAM3A-212ENST00000434658 RNF123Q5XPI4 1314 aa24.89■■□□□ 1.58
FAM3A-212ENST00000434658 PANK3Q9H999 370 aa24.89■■□□□ 1.58
FAM3A-212ENST00000434658 INSRP06213 1382 aa24.88■■□□□ 1.57
FAM3A-212ENST00000434658 ARHGEF28Q8N1W1 1705 aaKnown RBP24.86■■□□□ 1.57
FAM3A-212ENST00000434658 MST1RQ04912 1400 aa24.85■■□□□ 1.57
FAM3A-212ENST00000434658 EIF3AQ14152 1382 aaKnown RBP24.85■■□□□ 1.57
FAM3A-212ENST00000434658 CDCA8Q53HL2 280 aa24.84■■□□□ 1.57
FAM3A-212ENST00000434658 MYOM1P52179 1685 aa24.83■■□□□ 1.57
FAM3A-212ENST00000434658 CDC42BPGQ6DT37 1551 aa24.83■■□□□ 1.57
FAM3A-212ENST00000434658 MINK1Q8N4C8 1332 aaPredicted RBP24.83■■□□□ 1.56
FAM3A-212ENST00000434658 ROBO1Q9Y6N7 1651 aa24.82■■□□□ 1.56
FAM3A-212ENST00000434658 HSPA1LP34931 641 aa24.82■■□□□ 1.56
FAM3A-212ENST00000434658 NUTM2FA1L443 756 aa24.8■■□□□ 1.56
FAM3A-212ENST00000434658 CC2D1BQ5T0F9 858 aaKnown RBP24.8■■□□□ 1.56
FAM3A-212ENST00000434658 C1orf167Q5SNV9 1468 aa24.8■■□□□ 1.56
FAM3A-212ENST00000434658 BRINP3Q76B58 766 aa24.79■■□□□ 1.56
FAM3A-212ENST00000434658 RBM19Q9Y4C8 960 aaKnown RBP24.79■■□□□ 1.56
FAM3A-212ENST00000434658 BLMP54132 1417 aaPredicted RBP24.78■■□□□ 1.56
FAM3A-212ENST00000434658 CENPJQ9HC77 1338 aaPredicted RBP24.78■■□□□ 1.56
FAM3A-212ENST00000434658 QRICH2Q9H0J4 1663 aa24.76■■□□□ 1.55
FAM3A-212ENST00000434658 ORAI2Q96SN7 254 aa24.76■■□□□ 1.55
FAM3A-212ENST00000434658 ADGRB2O60241 1585 aa24.75■■□□□ 1.55
FAM3A-212ENST00000434658 FMN2Q9NZ56 1722 aa24.74■■□□□ 1.55
FAM3A-212ENST00000434658 WASLO00401 505 aaPredicted RBP24.74■■□□□ 1.55
FAM3A-212ENST00000434658 SLC24A1O60721 1099 aa24.74■■□□□ 1.55
FAM3A-212ENST00000434658 PDE3BQ13370 1112 aa24.74■■□□□ 1.55
FAM3A-212ENST00000434658 ESCO1Q5FWF5 840 aa24.74■■□□□ 1.55
FAM3A-212ENST00000434658 KNSTRNQ9Y448 316 aa24.72■■□□□ 1.55
FAM3A-212ENST00000434658 NPC1L1Q9UHC9 1359 aa24.71■■□□□ 1.55
FAM3A-212ENST00000434658 B4GALNT3Q6L9W6 998 aa24.7■■□□□ 1.55
FAM3A-212ENST00000434658 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
FAM3A-212ENST00000434658 MYT1Q01538 1121 aa24.7■■□□□ 1.54
FAM3A-212ENST00000434658 AMER1Q5JTC6 1135 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-212ENST00000434658 CDK19Q9BWU1 502 aa24.7■■□□□ 1.54
FAM3A-212ENST00000434658 DDX17Q92841 729 aaKnown RBP24.68■■□□□ 1.54
FAM3A-212ENST00000434658 SBNO2Q9Y2G9 1366 aa24.68■■□□□ 1.54
FAM3A-212ENST00000434658 PHLPP1O60346 1717 aa24.67■■□□□ 1.54
FAM3A-212ENST00000434658 RGPD8O14715 1765 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-212ENST00000434658 ANKARQ7Z5J8 1434 aa24.66■■□□□ 1.54
FAM3A-212ENST00000434658 AHDC1Q5TGY3 1603 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-212ENST00000434658 PRR36Q9H6K5 1346 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms