RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SOCS7O14512 581 aa10.59□□□□□ -0.71
COL17A1-204ENST00000433822 PHF14O94880 888 aa10.59□□□□□ -0.71
COL17A1-204ENST00000433822 COL9A1P20849 921 aa10.59□□□□□ -0.71
COL17A1-204ENST00000433822 TONSLQ96HA7 1378 aa10.59□□□□□ -0.71
COL17A1-204ENST00000433822 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
COL17A1-204ENST00000433822 ADGBQ8N7X0 1667 aa10.58□□□□□ -0.72
COL17A1-204ENST00000433822 ITGBL1O95965 494 aaPredicted RBP10.58□□□□□ -0.72
COL17A1-204ENST00000433822 ABCC5O15440 1437 aa10.57□□□□□ -0.72
COL17A1-204ENST00000433822 CROCC2H7BZ55 1655 aa10.57□□□□□ -0.72
COL17A1-204ENST00000433822 DENND4BO75064 1496 aaPredicted RBP10.56□□□□□ -0.72
COL17A1-204ENST00000433822 SHANK2Q9UPX8 1470 aa10.56□□□□□ -0.72
COL17A1-204ENST00000433822 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
COL17A1-204ENST00000433822 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
COL17A1-204ENST00000433822 NYAP1Q6ZVC0 841 aa10.56□□□□□ -0.72
COL17A1-204ENST00000433822 GLI2P10070 1586 aa10.56□□□□□ -0.72
COL17A1-204ENST00000433822 MAP3K4Q9Y6R4 1608 aa10.55□□□□□ -0.72
COL17A1-204ENST00000433822 BCAMP50895 628 aa10.55□□□□□ -0.72
COL17A1-204ENST00000433822 SIN3AQ96ST3 1273 aa10.55□□□□□ -0.72
COL17A1-204ENST00000433822 GPATCH8Q9UKJ3 1502 aaKnown RBP10.54□□□□□ -0.72
COL17A1-204ENST00000433822 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
COL17A1-204ENST00000433822 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
COL17A1-204ENST00000433822 KIF14Q15058 1648 aa10.54□□□□□ -0.72
COL17A1-204ENST00000433822 ZFRQ96KR1 1074 aaKnown RBP10.53□□□□□ -0.72
COL17A1-204ENST00000433822 EPAS1Q99814 870 aa10.53□□□□□ -0.72
COL17A1-204ENST00000433822 CAMSAP2Q08AD1 1489 aa10.53□□□□□ -0.72
COL17A1-204ENST00000433822 PLB1Q6P1J6 1458 aa10.53□□□□□ -0.72
COL17A1-204ENST00000433822 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.72
COL17A1-204ENST00000433822 RPRD2Q5VT52 1461 aaKnown RBP10.52□□□□□ -0.73
COL17A1-204ENST00000433822 NCOA1Q15788 1441 aa10.51□□□□□ -0.73
COL17A1-204ENST00000433822 CCER2I3L3R5 266 aa10.51□□□□□ -0.73
COL17A1-204ENST00000433822 C6orf132Q5T0Z8 1188 aa10.51□□□□□ -0.73
COL17A1-204ENST00000433822 ARHGEF5Q12774 1597 aa10.51□□□□□ -0.73
COL17A1-204ENST00000433822 ASXL2Q76L83 1435 aa10.5□□□□□ -0.73
COL17A1-204ENST00000433822 ABCC2Q92887 1545 aa10.5□□□□□ -0.73
COL17A1-204ENST00000433822 KDM5DQ9BY66 1539 aa10.5□□□□□ -0.73
COL17A1-204ENST00000433822 SPATA31D1Q6ZQQ2 1576 aa10.5□□□□□ -0.73
COL17A1-204ENST00000433822 ANKRD30BQ9BXX2 1392 aa10.5□□□□□ -0.73
COL17A1-204ENST00000433822 CDC42BPAQ5VT25 1732 aa10.5□□□□□ -0.73
COL17A1-204ENST00000433822 ATP10BO94823 1461 aa10.49□□□□□ -0.73
COL17A1-204ENST00000433822 KCNC4Q03721 635 aa10.48□□□□□ -0.73
COL17A1-204ENST00000433822 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
COL17A1-204ENST00000433822 MPHOSPH9Q99550 1183 aa10.48□□□□□ -0.73
COL17A1-204ENST00000433822 WBP1LQ9NX94 342 aa10.48□□□□□ -0.73
COL17A1-204ENST00000433822 TEX14Q8IWB6 1497 aa10.48□□□□□ -0.73
COL17A1-204ENST00000433822 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
COL17A1-204ENST00000433822 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
COL17A1-204ENST00000433822 RRP7BPQ9NSQ0 103 aa10.47□□□□□ -0.73
COL17A1-204ENST00000433822 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
COL17A1-204ENST00000433822 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
COL17A1-204ENST00000433822 TRIM6-TRIM34B2RNG4 842 aa10.46□□□□□ -0.73
COL17A1-204ENST00000433822 CFDP1Q9UEE9 299 aaPredicted RBP10.46□□□□□ -0.73
COL17A1-204ENST00000433822 ADAMTSL3P82987 1691 aa10.46□□□□□ -0.74
COL17A1-204ENST00000433822 POLR1AO95602 1720 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-204ENST00000433822 MAST1Q9Y2H9 1570 aa10.45□□□□□ -0.74
COL17A1-204ENST00000433822 PZPP20742 1482 aa10.45□□□□□ -0.74
COL17A1-204ENST00000433822 PLEKHD1A6NEE1 506 aa10.45□□□□□ -0.74
COL17A1-204ENST00000433822 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
COL17A1-204ENST00000433822 PREX2Q70Z35 1606 aa10.44□□□□□ -0.74
COL17A1-204ENST00000433822 PTPRGP23470 1445 aa10.44□□□□□ -0.74
COL17A1-204ENST00000433822 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
COL17A1-204ENST00000433822 DPYSL4O14531 572 aa10.44□□□□□ -0.74
COL17A1-204ENST00000433822 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.44□□□□□ -0.74
COL17A1-204ENST00000433822 TSR3Q9UJK0 312 aaKnown RBP10.44□□□□□ -0.74
COL17A1-204ENST00000433822 PTPRMP28827 1452 aa10.43□□□□□ -0.74
COL17A1-204ENST00000433822 LRCH3Q96II8 777 aa10.43□□□□□ -0.74
COL17A1-204ENST00000433822 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
COL17A1-204ENST00000433822 ZCCHC11Q5TAX3 1644 aaKnown RBP10.43□□□□□ -0.74
COL17A1-204ENST00000433822 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
COL17A1-204ENST00000433822 Q6ZNB5 142 aa10.42□□□□□ -0.74
COL17A1-204ENST00000433822 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
COL17A1-204ENST00000433822 RBM33Q96EV2 1170 aaKnown RBP10.42□□□□□ -0.74
COL17A1-204ENST00000433822 CHIC2Q9UKJ5 165 aa10.42□□□□□ -0.74
COL17A1-204ENST00000433822 ARHGEF12Q9NZN5 1544 aa10.42□□□□□ -0.74
COL17A1-204ENST00000433822 UHRF1BP1LA0JNW5 1464 aa10.42□□□□□ -0.74
COL17A1-204ENST00000433822 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
COL17A1-204ENST00000433822 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
COL17A1-204ENST00000433822 ANKRD50Q9ULJ7 1429 aa10.41□□□□□ -0.74
COL17A1-204ENST00000433822 ANP32CO43423 234 aa10.41□□□□□ -0.74
COL17A1-204ENST00000433822 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
COL17A1-204ENST00000433822 CCDC141Q6ZP82 1450 aa10.41□□□□□ -0.74
COL17A1-204ENST00000433822 MADDQ8WXG6 1647 aa10.4□□□□□ -0.74
COL17A1-204ENST00000433822 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL17A1-204ENST00000433822 DDX10Q13206 875 aaKnown RBP10.4□□□□□ -0.74
COL17A1-204ENST00000433822 DDX12PQ92771 950 aa10.4□□□□□ -0.74
COL17A1-204ENST00000433822 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
COL17A1-204ENST00000433822 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
COL17A1-204ENST00000433822 CDC42BPBQ9Y5S2 1711 aa10.39□□□□□ -0.75
COL17A1-204ENST00000433822 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
COL17A1-204ENST00000433822 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
COL17A1-204ENST00000433822 PLXNC1O60486 1568 aa10.39□□□□□ -0.75
COL17A1-204ENST00000433822 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
COL17A1-204ENST00000433822 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
COL17A1-204ENST00000433822 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
COL17A1-204ENST00000433822 ARID4BQ4LE39 1312 aaPredicted RBP10.37□□□□□ -0.75
COL17A1-204ENST00000433822 SAMD9LQ8IVG5 1584 aa10.37□□□□□ -0.75
COL17A1-204ENST00000433822 L3MBTL2Q969R5 705 aa10.37□□□□□ -0.75
COL17A1-204ENST00000433822 CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
COL17A1-204ENST00000433822 RIMS1Q86UR5 1692 aaKnown RBP10.37□□□□□ -0.75
COL17A1-204ENST00000433822 UNC13BO14795 1591 aa10.36□□□□□ -0.75
COL17A1-204ENST00000433822 CERKQ8TCT0 537 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms