RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
LINC00840-201ENST00000431737 C3P01024 1663 aa16.92■□□□□ 0.3
LINC00840-201ENST00000431737 FER1L4A9Z1Z3 1794 aa16.92■□□□□ 0.3
LINC00840-201ENST00000431737 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC00840-201ENST00000431737 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
LINC00840-201ENST00000431737 BCANQ96GW7 911 aa16.91■□□□□ 0.3
LINC00840-201ENST00000431737 TECPR2O15040 1411 aa16.91■□□□□ 0.3
LINC00840-201ENST00000431737 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
LINC00840-201ENST00000431737 CPS1P31327 1500 aa16.9■□□□□ 0.3
LINC00840-201ENST00000431737 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
LINC00840-201ENST00000431737 MED14O60244 1454 aa16.89■□□□□ 0.29
LINC00840-201ENST00000431737 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
LINC00840-201ENST00000431737 CGNL1Q0VF96 1302 aa16.88■□□□□ 0.29
LINC00840-201ENST00000431737 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC00840-201ENST00000431737 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
LINC00840-201ENST00000431737 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
LINC00840-201ENST00000431737 PRAM1Q96QH2 718 aa16.87■□□□□ 0.29
LINC00840-201ENST00000431737 KIF20BQ96Q89 1820 aa16.87■□□□□ 0.29
LINC00840-201ENST00000431737 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
LINC00840-201ENST00000431737 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
LINC00840-201ENST00000431737 STK26Q9P289 416 aa16.86■□□□□ 0.29
LINC00840-201ENST00000431737 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
LINC00840-201ENST00000431737 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
LINC00840-201ENST00000431737 ATP7BP35670 1465 aa16.84■□□□□ 0.29
LINC00840-201ENST00000431737 SLIT1O75093 1534 aa16.84■□□□□ 0.29
LINC00840-201ENST00000431737 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
LINC00840-201ENST00000431737 SIRT1Q96EB6 747 aa16.84■□□□□ 0.29
LINC00840-201ENST00000431737 POGKQ9P215 609 aa16.84■□□□□ 0.29
LINC00840-201ENST00000431737 ZNF521Q96K83 1311 aa16.83■□□□□ 0.29
LINC00840-201ENST00000431737 ARHGAP23Q9P227 1491 aa16.83■□□□□ 0.28
LINC00840-201ENST00000431737 ADGRB2O60241 1585 aa16.83■□□□□ 0.28
LINC00840-201ENST00000431737 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
LINC00840-201ENST00000431737 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
LINC00840-201ENST00000431737 NGEFQ8N5V2 710 aa16.82■□□□□ 0.28
LINC00840-201ENST00000431737 METP08581 1390 aa16.82■□□□□ 0.28
LINC00840-201ENST00000431737 AEBP2Q6ZN18 517 aaPredicted RBP16.81■□□□□ 0.28
LINC00840-201ENST00000431737 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
LINC00840-201ENST00000431737 PLEKHG1Q9ULL1 1385 aa16.81■□□□□ 0.28
LINC00840-201ENST00000431737 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
LINC00840-201ENST00000431737 ADAMTS13Q76LX8 1427 aa16.81■□□□□ 0.28
LINC00840-201ENST00000431737 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
LINC00840-201ENST00000431737 SAFB2Q14151 953 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00840-201ENST00000431737 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
LINC00840-201ENST00000431737 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
LINC00840-201ENST00000431737 DIP2AQ14689 1571 aa16.78■□□□□ 0.28
LINC00840-201ENST00000431737 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
LINC00840-201ENST00000431737 AKAP12Q02952 1782 aa16.78■□□□□ 0.28
LINC00840-201ENST00000431737 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
LINC00840-201ENST00000431737 CDK19Q9BWU1 502 aa16.77■□□□□ 0.28
LINC00840-201ENST00000431737 RCAN3Q9UKA8 241 aa16.77■□□□□ 0.27
LINC00840-201ENST00000431737 COL3A1P02461 1466 aaPredicted RBP16.76■□□□□ 0.27
LINC00840-201ENST00000431737 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
LINC00840-201ENST00000431737 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
LINC00840-201ENST00000431737 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
LINC00840-201ENST00000431737 ITSN1Q15811 1721 aa16.75■□□□□ 0.27
LINC00840-201ENST00000431737 RRP1P56182 461 aaKnown RBP16.75■□□□□ 0.27
LINC00840-201ENST00000431737 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
LINC00840-201ENST00000431737 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
LINC00840-201ENST00000431737 CPSF1Q10570 1443 aaKnown RBP16.74■□□□□ 0.27
LINC00840-201ENST00000431737 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
LINC00840-201ENST00000431737 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
LINC00840-201ENST00000431737 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
LINC00840-201ENST00000431737 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
LINC00840-201ENST00000431737 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
LINC00840-201ENST00000431737 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
LINC00840-201ENST00000431737 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
LINC00840-201ENST00000431737 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
LINC00840-201ENST00000431737 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
LINC00840-201ENST00000431737 MTHFSP49914 203 aa16.71■□□□□ 0.27
LINC00840-201ENST00000431737 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
LINC00840-201ENST00000431737 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
LINC00840-201ENST00000431737 XRN1Q8IZH2 1706 aaKnown RBP16.71■□□□□ 0.26
LINC00840-201ENST00000431737 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
LINC00840-201ENST00000431737 FYB1O15117 783 aa16.7■□□□□ 0.26
LINC00840-201ENST00000431737 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
LINC00840-201ENST00000431737 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
LINC00840-201ENST00000431737 ROBO2Q9HCK4 1378 aa16.7■□□□□ 0.26
LINC00840-201ENST00000431737 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
LINC00840-201ENST00000431737 RIMS1Q86UR5 1692 aaKnown RBP16.69■□□□□ 0.26
LINC00840-201ENST00000431737 APAF1O14727 1248 aa16.69■□□□□ 0.26
LINC00840-201ENST00000431737 LTKP29376 864 aa16.69■□□□□ 0.26
LINC00840-201ENST00000431737 SLFN5Q08AF3 891 aa16.69■□□□□ 0.26
LINC00840-201ENST00000431737 CABP1Q9NZU7 370 aa16.69■□□□□ 0.26
LINC00840-201ENST00000431737 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
LINC00840-201ENST00000431737 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
LINC00840-201ENST00000431737 ADAMTSL3P82987 1691 aa16.68■□□□□ 0.26
LINC00840-201ENST00000431737 CCDC146Q8IYE0 955 aa16.68■□□□□ 0.26
LINC00840-201ENST00000431737 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
LINC00840-201ENST00000431737 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
LINC00840-201ENST00000431737 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
LINC00840-201ENST00000431737 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
LINC00840-201ENST00000431737 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
LINC00840-201ENST00000431737 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
LINC00840-201ENST00000431737 TXNDC2Q86VQ3 553 aa16.66■□□□□ 0.26
LINC00840-201ENST00000431737 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
LINC00840-201ENST00000431737 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
LINC00840-201ENST00000431737 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
LINC00840-201ENST00000431737 E9PSI1 815 aa16.64■□□□□ 0.25
LINC00840-201ENST00000431737 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
LINC00840-201ENST00000431737 B4GALNT3Q6L9W6 998 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms