RNA–Protein interactions for RNA: ENST00000430644.5

PCGF3-205, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 2,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-205ENST00000430644 DDX11L8A8MPP1 907 aa22.05■■□□□ 1.12
PCGF3-205ENST00000430644 CARD14Q9BXL6 1004 aa22.05■■□□□ 1.12
PCGF3-205ENST00000430644 MADDQ8WXG6 1647 aa22.04■■□□□ 1.12
PCGF3-205ENST00000430644 GAS2L3Q86XJ1 694 aa22.03■■□□□ 1.12
PCGF3-205ENST00000430644 CDC42BPBQ9Y5S2 1711 aa22.03■■□□□ 1.12
PCGF3-205ENST00000430644 SYCP2Q9BX26 1530 aa22.02■■□□□ 1.12
PCGF3-205ENST00000430644 HSCBQ8IWL3 235 aa22.01■■□□□ 1.11
PCGF3-205ENST00000430644 TRIM44Q96DX7 344 aaPredicted RBP22.01■■□□□ 1.11
PCGF3-205ENST00000430644 ISY1Q9ULR0 285 aaKnown RBP22■■□□□ 1.11
PCGF3-205ENST00000430644 SCAPERQ9BY12 1400 aa21.99■■□□□ 1.11
PCGF3-205ENST00000430644 NPM1P06748 294 aaKnown RBP eCLIP21.99■■□□□ 1.11
PCGF3-205ENST00000430644 DDIT3P35638 169 aa21.99■■□□□ 1.11
PCGF3-205ENST00000430644 TCP11L2Q8N4U5 519 aa21.99■■□□□ 1.11
PCGF3-205ENST00000430644 POLR3AO14802 1390 aaPredicted RBP21.98■■□□□ 1.11
PCGF3-205ENST00000430644 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
PCGF3-205ENST00000430644 PREX2Q70Z35 1606 aa21.97■■□□□ 1.11
PCGF3-205ENST00000430644 TNPO1Q92973 898 aaKnown RBP21.97■■□□□ 1.11
PCGF3-205ENST00000430644 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
PCGF3-205ENST00000430644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.97■■□□□ 1.113e-6■■■■□ 24.5
PCGF3-205ENST00000430644 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
PCGF3-205ENST00000430644 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
PCGF3-205ENST00000430644 NCOA3Q9Y6Q9 1424 aa21.96■■□□□ 1.11
PCGF3-205ENST00000430644 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.1
PCGF3-205ENST00000430644 TNNT2P45379 298 aaPredicted RBP21.94■■□□□ 1.1
PCGF3-205ENST00000430644 KDM5AP29375 1690 aaKnown RBP21.94■■□□□ 1.1
PCGF3-205ENST00000430644 WDR63Q8IWG1 891 aa21.93■■□□□ 1.1
PCGF3-205ENST00000430644 TPM2P07951 284 aa21.93■■□□□ 1.1
PCGF3-205ENST00000430644 RIMBP3CA6NJZ7 1639 aa21.92■■□□□ 1.1
PCGF3-205ENST00000430644 RIMBP3BA6NNM3 1639 aa21.92■■□□□ 1.1
PCGF3-205ENST00000430644 RIMBP3Q9UFD9 1639 aa21.92■■□□□ 1.1
PCGF3-205ENST00000430644 ASXL2Q76L83 1435 aa21.92■■□□□ 1.1
PCGF3-205ENST00000430644 FTSJ3Q8IY81 847 aaKnown RBP21.92■■□□□ 1.1
PCGF3-205ENST00000430644 CEP152O94986 1710 aa21.91■■□□□ 1.1
PCGF3-205ENST00000430644 DZIP1LQ8IYY4 767 aaKnown RBP21.91■■□□□ 1.1
PCGF3-205ENST00000430644 ERVK-7P63135 1459 aa21.91■■□□□ 1.1
PCGF3-205ENST00000430644 ZKSCAN2Q63HK3 967 aa21.91■■□□□ 1.1
PCGF3-205ENST00000430644 IQSEC2Q5JU85 1478 aa21.9■■□□□ 1.1
PCGF3-205ENST00000430644 ARHGAP5Q13017 1502 aa21.9■■□□□ 1.1
PCGF3-205ENST00000430644 SMC5Q8IY18 1101 aa21.9■■□□□ 1.1
PCGF3-205ENST00000430644 DUOX2Q9NRD8 1548 aa21.89■■□□□ 1.09
PCGF3-205ENST00000430644 KIAA1211Q6ZU35 1233 aa21.89■■□□□ 1.09
PCGF3-205ENST00000430644 SNX21Q969T3 373 aa21.89■■□□□ 1.09
PCGF3-205ENST00000430644 RBM25P49756 843 aaKnown RBP21.88■■□□□ 1.09
PCGF3-205ENST00000430644 RAB3GAP1Q15042 981 aa21.88■■□□□ 1.09
PCGF3-205ENST00000430644 GBP4Q96PP9 640 aa21.88■■□□□ 1.09
PCGF3-205ENST00000430644 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
PCGF3-205ENST00000430644 SPHKAPQ2M3C7 1700 aa21.88■■□□□ 1.09
PCGF3-205ENST00000430644 HDAC1Q13547 482 aaPredicted RBP21.88■■□□□ 1.09
PCGF3-205ENST00000430644 PDCL3Q9H2J4 239 aa21.88■■□□□ 1.09
PCGF3-205ENST00000430644 MORC1Q86VD1 984 aa21.87■■□□□ 1.09
PCGF3-205ENST00000430644 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
PCGF3-205ENST00000430644 CFAP70Q5T0N1 1121 aa21.86■■□□□ 1.09
PCGF3-205ENST00000430644 CIZ1Q9ULV3 898 aaPredicted RBP21.86■■□□□ 1.09
PCGF3-205ENST00000430644 SKOR2Q2VWA4 1001 aaPredicted RBP21.85■■□□□ 1.09
PCGF3-205ENST00000430644 FOXD4L1Q9NU39 408 aa21.85■■□□□ 1.09
PCGF3-205ENST00000430644 KANK1Q14678 1352 aa21.84■■□□□ 1.09
PCGF3-205ENST00000430644 CCDC27Q2M243 656 aa21.84■■□□□ 1.09
PCGF3-205ENST00000430644 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
PCGF3-205ENST00000430644 TRIM27P14373 513 aa21.84■■□□□ 1.09
PCGF3-205ENST00000430644 ITPRIPQ8IWB1 547 aa21.83■■□□□ 1.09
PCGF3-205ENST00000430644 CCDC173Q0VFZ6 552 aa21.83■■□□□ 1.08
PCGF3-205ENST00000430644 TSR2Q969E8 191 aaKnown RBP21.83■■□□□ 1.08
PCGF3-205ENST00000430644 CD2BP2O95400 341 aaKnown RBP21.82■■□□□ 1.08
PCGF3-205ENST00000430644 PPP1R9BQ96SB3 815 aa21.82■■□□□ 1.08
PCGF3-205ENST00000430644 SMC4Q9NTJ3 1288 aa21.82■■□□□ 1.08
PCGF3-205ENST00000430644 NASPP49321 788 aaPredicted RBP21.81■■□□□ 1.08
PCGF3-205ENST00000430644 ZSCAN30Q86W11 494 aa21.81■■□□□ 1.08
PCGF3-205ENST00000430644 NSD3Q9BZ95 1437 aa21.81■■□□□ 1.08
PCGF3-205ENST00000430644 MTHFSP49914 203 aa21.81■■□□□ 1.08
PCGF3-205ENST00000430644 KIF2CQ99661 725 aa21.81■■□□□ 1.08
PCGF3-205ENST00000430644 PLCH2O75038 1416 aa21.81■■□□□ 1.08
PCGF3-205ENST00000430644 TRPM2O94759 1503 aa21.81■■□□□ 1.08
PCGF3-205ENST00000430644 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
PCGF3-205ENST00000430644 DDX19BQ9UMR2 479 aa21.8■■□□□ 1.08
PCGF3-205ENST00000430644 CLTCL1P53675 1640 aa21.79■■□□□ 1.08
PCGF3-205ENST00000430644 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
PCGF3-205ENST00000430644 OFD1O75665 1012 aa21.79■■□□□ 1.08
PCGF3-205ENST00000430644 LNPKQ9C0E8 428 aa21.78■■□□□ 1.08
PCGF3-205ENST00000430644 SSFA2P28290 1259 aa21.78■■□□□ 1.08
PCGF3-205ENST00000430644 SSH1Q8WYL5 1049 aa21.78■■□□□ 1.08
PCGF3-205ENST00000430644 EXOSC9Q06265 439 aaKnown RBP21.77■■□□□ 1.08
PCGF3-205ENST00000430644 PTMSP20962 102 aa21.77■■□□□ 1.08
PCGF3-205ENST00000430644 RIPK4P57078 832 aa21.77■■□□□ 1.08
PCGF3-205ENST00000430644 SLC12A5Q9H2X9 1139 aa21.77■■□□□ 1.08
PCGF3-205ENST00000430644 RBM10P98175 930 aaKnown RBP21.76■■□□□ 1.07
PCGF3-205ENST00000430644 ATF7IPQ6VMQ6 1270 aa21.76■■□□□ 1.07
PCGF3-205ENST00000430644 PTPRTO14522 1441 aa21.76■■□□□ 1.07
PCGF3-205ENST00000430644 NUCB1Q02818 461 aa21.76■■□□□ 1.07
PCGF3-205ENST00000430644 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
PCGF3-205ENST00000430644 TMEM57Q8N5G2 664 aa21.76■■□□□ 1.07
PCGF3-205ENST00000430644 RBM42Q9BTD8 480 aaKnown RBP21.75■■□□□ 1.07
PCGF3-205ENST00000430644 ZBTB40Q9NUA8 1239 aa21.75■■□□□ 1.07
PCGF3-205ENST00000430644 NOB1Q9ULX3 412 aaKnown RBP21.75■■□□□ 1.07
PCGF3-205ENST00000430644 ZNF518AQ6AHZ1 1483 aa21.74■■□□□ 1.07
PCGF3-205ENST00000430644 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
PCGF3-205ENST00000430644 MSNP26038 577 aaKnown RBP21.74■■□□□ 1.07
PCGF3-205ENST00000430644 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.073e-6■□□□□ 10.4
PCGF3-205ENST00000430644 K7ELQ4 463 aaPredicted RBP21.74■■□□□ 1.07
PCGF3-205ENST00000430644 DDX49Q9Y6V7 483 aaKnown RBP21.74■■□□□ 1.07
PCGF3-205ENST00000430644 AFAP1Q8N556 730 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms