RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
CALD1-207ENST00000430085 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
CALD1-207ENST00000430085 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
CALD1-207ENST00000430085 ANKLE2Q86XL3 938 aa19.34■□□□□ 0.69
CALD1-207ENST00000430085 BCANQ96GW7 911 aa19.34■□□□□ 0.69
CALD1-207ENST00000430085 LRPPRCP42704 1394 aaKnown RBP19.33■□□□□ 0.69
CALD1-207ENST00000430085 AMER1Q5JTC6 1135 aaPredicted RBP19.33■□□□□ 0.69
CALD1-207ENST00000430085 PNISRQ8TF01 805 aaKnown RBP19.33■□□□□ 0.68
CALD1-207ENST00000430085 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
CALD1-207ENST00000430085 DLC1Q96QB1 1528 aa19.32■□□□□ 0.68
CALD1-207ENST00000430085 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
CALD1-207ENST00000430085 MINK1Q8N4C8 1332 aaPredicted RBP19.3■□□□□ 0.68
CALD1-207ENST00000430085 SLC12A5Q9H2X9 1139 aa19.29■□□□□ 0.68
CALD1-207ENST00000430085 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
CALD1-207ENST00000430085 SRPK2P78362 688 aaKnown RBP19.29■□□□□ 0.68
CALD1-207ENST00000430085 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
CALD1-207ENST00000430085 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
CALD1-207ENST00000430085 MED14O60244 1454 aa19.28■□□□□ 0.68
CALD1-207ENST00000430085 METP08581 1390 aa19.28■□□□□ 0.68
CALD1-207ENST00000430085 PLEKHG1Q9ULL1 1385 aa19.27■□□□□ 0.68
CALD1-207ENST00000430085 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
CALD1-207ENST00000430085 ZBED9Q6R2W3 1325 aa19.27■□□□□ 0.67
CALD1-207ENST00000430085 NINLQ9Y2I6 1382 aa19.26■□□□□ 0.67
CALD1-207ENST00000430085 ATAD2Q6PL18 1390 aa19.25■□□□□ 0.67
CALD1-207ENST00000430085 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
CALD1-207ENST00000430085 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
CALD1-207ENST00000430085 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
CALD1-207ENST00000430085 ANKRD36BQ8N2N9 1353 aa19.24■□□□□ 0.67
CALD1-207ENST00000430085 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
CALD1-207ENST00000430085 ADAMTS13Q76LX8 1427 aa19.22■□□□□ 0.67
CALD1-207ENST00000430085 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
CALD1-207ENST00000430085 CDK19Q9BWU1 502 aa19.21■□□□□ 0.67
CALD1-207ENST00000430085 TECPR2O15040 1411 aa19.21■□□□□ 0.67
CALD1-207ENST00000430085 SIRT1Q96EB6 747 aa19.21■□□□□ 0.67
CALD1-207ENST00000430085 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
CALD1-207ENST00000430085 USP32Q8NFA0 1604 aa19.21■□□□□ 0.67
CALD1-207ENST00000430085 FAM135BQ49AJ0 1406 aa19.21■□□□□ 0.67
CALD1-207ENST00000430085 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
CALD1-207ENST00000430085 CPS1P31327 1500 aa19.2■□□□□ 0.66
CALD1-207ENST00000430085 CGNL1Q0VF96 1302 aa19.2■□□□□ 0.66
CALD1-207ENST00000430085 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
CALD1-207ENST00000430085 DIP2AQ14689 1571 aa19.16■□□□□ 0.66
CALD1-207ENST00000430085 A0A1W2PP64 1363 aa19.16■□□□□ 0.66
CALD1-207ENST00000430085 MORC1Q86VD1 984 aa19.16■□□□□ 0.66
CALD1-207ENST00000430085 NSD2O96028 1365 aa19.15■□□□□ 0.66
CALD1-207ENST00000430085 INSRP06213 1382 aa19.15■□□□□ 0.66
CALD1-207ENST00000430085 HDGFL2Q7Z4V5 671 aaPredicted RBP19.14■□□□□ 0.65
CALD1-207ENST00000430085 WASLO00401 505 aaPredicted RBP19.13■□□□□ 0.65
CALD1-207ENST00000430085 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
CALD1-207ENST00000430085 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
CALD1-207ENST00000430085 ROBO2Q9HCK4 1378 aa19.13■□□□□ 0.65
CALD1-207ENST00000430085 STRCP1A6NGW2 1772 aa19.12■□□□□ 0.65
CALD1-207ENST00000430085 CHD2O14647 1828 aaKnown RBP19.12■□□□□ 0.65
CALD1-207ENST00000430085 CABP1Q9NZU7 370 aa19.12■□□□□ 0.65
CALD1-207ENST00000430085 NEFLP07196 543 aa19.11■□□□□ 0.65
CALD1-207ENST00000430085 BLMP54132 1417 aaPredicted RBP19.11■□□□□ 0.65
CALD1-207ENST00000430085 CD163L1Q9NR16 1453 aa19.11■□□□□ 0.65
CALD1-207ENST00000430085 ZNF335Q9H4Z2 1342 aaPredicted RBP19.1■□□□□ 0.65
CALD1-207ENST00000430085 ATP7BP35670 1465 aa19.09■□□□□ 0.65
CALD1-207ENST00000430085 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
CALD1-207ENST00000430085 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
CALD1-207ENST00000430085 PTPRUQ92729 1446 aa19.09■□□□□ 0.65
CALD1-207ENST00000430085 ADAMTS8Q9UP79 889 aa19.08■□□□□ 0.65
CALD1-207ENST00000430085 AMOTL2Q9Y2J4 779 aa19.08■□□□□ 0.65
CALD1-207ENST00000430085 ADGRB2O60241 1585 aa19.07■□□□□ 0.64
CALD1-207ENST00000430085 PPIP5K1Q6PFW1 1433 aa19.06■□□□□ 0.64
CALD1-207ENST00000430085 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
CALD1-207ENST00000430085 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
CALD1-207ENST00000430085 PTCH1Q13635 1447 aa19.06■□□□□ 0.64
CALD1-207ENST00000430085 POLR3AO14802 1390 aaPredicted RBP19.06■□□□□ 0.64
CALD1-207ENST00000430085 NUDT16Q96DE0 195 aaKnown RBP19.06■□□□□ 0.64
CALD1-207ENST00000430085 SMG6Q86US8 1419 aaKnown RBP19.05■□□□□ 0.64
CALD1-207ENST00000430085 PIK3R4Q99570 1358 aa19.05■□□□□ 0.64
CALD1-207ENST00000430085 XRN1Q8IZH2 1706 aaKnown RBP19.05■□□□□ 0.64
CALD1-207ENST00000430085 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
CALD1-207ENST00000430085 CCDC61Q9Y6R9 512 aa19.04■□□□□ 0.64
CALD1-207ENST00000430085 LTBP4Q8N2S1 1624 aa19.04■□□□□ 0.64
CALD1-207ENST00000430085 KCNA6P17658 529 aa19.04■□□□□ 0.64
CALD1-207ENST00000430085 FKBP8Q14318 412 aa19.04■□□□□ 0.64
CALD1-207ENST00000430085 GGNBP2Q9H3C7 697 aa19.03■□□□□ 0.64
CALD1-207ENST00000430085 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
CALD1-207ENST00000430085 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
CALD1-207ENST00000430085 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
CALD1-207ENST00000430085 FYB1O15117 783 aa19.02■□□□□ 0.64
CALD1-207ENST00000430085 CFAP53Q96M91 514 aa19.02■□□□□ 0.64
CALD1-207ENST00000430085 KIF20BQ96Q89 1820 aa19.02■□□□□ 0.64
CALD1-207ENST00000430085 MTHFSP49914 203 aa19.01■□□□□ 0.63
CALD1-207ENST00000430085 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
CALD1-207ENST00000430085 CPSF1Q10570 1443 aaKnown RBP19■□□□□ 0.63
CALD1-207ENST00000430085 PDE3BQ13370 1112 aa19■□□□□ 0.63
CALD1-207ENST00000430085 NKTRP30414 1462 aaKnown RBP18.99■□□□□ 0.63
CALD1-207ENST00000430085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.99■□□□□ 0.63
CALD1-207ENST00000430085 EDC4Q6P2E9 1401 aaKnown RBP18.99■□□□□ 0.63
CALD1-207ENST00000430085 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
CALD1-207ENST00000430085 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
CALD1-207ENST00000430085 ITSN1Q15811 1721 aa18.98■□□□□ 0.63
CALD1-207ENST00000430085 RBM33Q96EV2 1170 aaKnown RBP18.97■□□□□ 0.63
CALD1-207ENST00000430085 LRRC7Q96NW7 1537 aa18.97■□□□□ 0.63
CALD1-207ENST00000430085 ZNF692Q9BU19 519 aaPredicted RBP18.96■□□□□ 0.63
CALD1-207ENST00000430085 SHPRHQ149N8 1683 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms