RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 NEURL4Q96JN8 1562 aa19.42■□□□□ 0.7
LINC00839-202ENST00000429940 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
LINC00839-202ENST00000429940 FBXO31Q5XUX0 539 aaPredicted RBP19.41■□□□□ 0.7
LINC00839-202ENST00000429940 RTN4Q9NQC3 1192 aaKnown RBP19.41■□□□□ 0.7
LINC00839-202ENST00000429940 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
LINC00839-202ENST00000429940 CARD14Q9BXL6 1004 aa19.41■□□□□ 0.7
LINC00839-202ENST00000429940 VIRMAQ69YN4 1812 aaKnown RBP19.4■□□□□ 0.7
LINC00839-202ENST00000429940 LMTK2Q8IWU2 1503 aa19.4■□□□□ 0.7
LINC00839-202ENST00000429940 MYOM2P54296 1465 aa19.4■□□□□ 0.7
LINC00839-202ENST00000429940 IGHDP01880 384 aa19.4■□□□□ 0.7
LINC00839-202ENST00000429940 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
LINC00839-202ENST00000429940 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.7
LINC00839-202ENST00000429940 CAMSAP1Q5T5Y3 1602 aa19.39■□□□□ 0.69
LINC00839-202ENST00000429940 AGLP35573 1532 aa19.39■□□□□ 0.69
LINC00839-202ENST00000429940 PDE3AQ14432 1141 aa19.39■□□□□ 0.69
LINC00839-202ENST00000429940 NINLQ9Y2I6 1382 aa19.38■□□□□ 0.69
LINC00839-202ENST00000429940 CENPJQ9HC77 1338 aaPredicted RBP19.38■□□□□ 0.69
LINC00839-202ENST00000429940 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
LINC00839-202ENST00000429940 FRAT1Q92837 279 aaPredicted RBP19.37■□□□□ 0.69
LINC00839-202ENST00000429940 ADGRF5Q8IZF2 1346 aa19.37■□□□□ 0.69
LINC00839-202ENST00000429940 CHGAP10645 457 aaKnown RBP19.36■□□□□ 0.69
LINC00839-202ENST00000429940 CLTCQ00610 1675 aaKnown RBP19.36■□□□□ 0.69
LINC00839-202ENST00000429940 POLR3AO14802 1390 aaPredicted RBP19.36■□□□□ 0.69
LINC00839-202ENST00000429940 KIF1BO60333 1816 aa19.36■□□□□ 0.69
LINC00839-202ENST00000429940 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
LINC00839-202ENST00000429940 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
LINC00839-202ENST00000429940 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
LINC00839-202ENST00000429940 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
LINC00839-202ENST00000429940 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
LINC00839-202ENST00000429940 FRAT2O75474 233 aaPredicted RBP19.34■□□□□ 0.69
LINC00839-202ENST00000429940 PANK1Q8TE04 598 aa19.34■□□□□ 0.69
LINC00839-202ENST00000429940 BRPF3Q9ULD4 1205 aa19.34■□□□□ 0.69
LINC00839-202ENST00000429940 COG6Q9Y2V7 657 aa19.34■□□□□ 0.69
LINC00839-202ENST00000429940 MAPK8IP3Q9UPT6 1336 aa19.33■□□□□ 0.69
LINC00839-202ENST00000429940 ESF1Q9H501 851 aaKnown RBP19.33■□□□□ 0.68
LINC00839-202ENST00000429940 SHPRHQ149N8 1683 aa19.32■□□□□ 0.68
LINC00839-202ENST00000429940 MROH2AA6NES4 1674 aa19.31■□□□□ 0.68
LINC00839-202ENST00000429940 USP19O94966 1318 aa19.31■□□□□ 0.68
LINC00839-202ENST00000429940 SBNO2Q9Y2G9 1366 aa19.31■□□□□ 0.68
LINC00839-202ENST00000429940 ZC3H13Q5T200 1668 aaKnown RBP19.31■□□□□ 0.68
LINC00839-202ENST00000429940 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
LINC00839-202ENST00000429940 IDI1Q13907 227 aa19.3■□□□□ 0.68
LINC00839-202ENST00000429940 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
LINC00839-202ENST00000429940 NSD3Q9BZ95 1437 aa19.29■□□□□ 0.68
LINC00839-202ENST00000429940 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
LINC00839-202ENST00000429940 NRXN1Q9ULB1 1477 aa19.29■□□□□ 0.68
LINC00839-202ENST00000429940 NEUROD2Q15784 382 aa19.28■□□□□ 0.68
LINC00839-202ENST00000429940 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
LINC00839-202ENST00000429940 ZMYM3Q14202 1370 aa19.28■□□□□ 0.68
LINC00839-202ENST00000429940 NUTM2DQ5VT03 806 aaPredicted RBP19.28■□□□□ 0.68
LINC00839-202ENST00000429940 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
LINC00839-202ENST00000429940 NOS1P29475 1434 aa19.28■□□□□ 0.68
LINC00839-202ENST00000429940 ARHGAP31Q2M1Z3 1444 aa19.28■□□□□ 0.68
LINC00839-202ENST00000429940 SEC24BO95487 1268 aa19.27■□□□□ 0.68
LINC00839-202ENST00000429940 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
LINC00839-202ENST00000429940 TNNT2P45379 298 aaPredicted RBP19.27■□□□□ 0.68
LINC00839-202ENST00000429940 RRP7AQ9Y3A4 280 aaKnown RBP19.27■□□□□ 0.68
LINC00839-202ENST00000429940 RARSP54136 660 aaKnown RBP19.26■□□□□ 0.67
LINC00839-202ENST00000429940 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
LINC00839-202ENST00000429940 SETBP1Q9Y6X0 1596 aa19.26■□□□□ 0.67
LINC00839-202ENST00000429940 PREX1Q8TCU6 1659 aa19.26■□□□□ 0.67
LINC00839-202ENST00000429940 PMFBP1Q8TBY8 1022 aa19.25■□□□□ 0.67
LINC00839-202ENST00000429940 TCP11L2Q8N4U5 519 aa19.25■□□□□ 0.67
LINC00839-202ENST00000429940 AAMPQ13685 434 aa19.24■□□□□ 0.67
LINC00839-202ENST00000429940 BECN1Q14457 450 aa19.24■□□□□ 0.67
LINC00839-202ENST00000429940 QRICH2Q9H0J4 1663 aa19.24■□□□□ 0.67
LINC00839-202ENST00000429940 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
LINC00839-202ENST00000429940 ADGRB3O60242 1522 aa19.23■□□□□ 0.67
LINC00839-202ENST00000429940 WDR63Q8IWG1 891 aa19.22■□□□□ 0.67
LINC00839-202ENST00000429940 SLC12A5Q9H2X9 1139 aa19.22■□□□□ 0.67
LINC00839-202ENST00000429940 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
LINC00839-202ENST00000429940 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
LINC00839-202ENST00000429940 PCDHB15Q9Y5E8 787 aa19.21■□□□□ 0.67
LINC00839-202ENST00000429940 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
LINC00839-202ENST00000429940 RLBP1P12271 317 aa19.2■□□□□ 0.66
LINC00839-202ENST00000429940 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
LINC00839-202ENST00000429940 MYO5BQ9ULV0 1848 aa19.2■□□□□ 0.66
LINC00839-202ENST00000429940 BCL2L13Q9BXK5 485 aa19.2■□□□□ 0.66
LINC00839-202ENST00000429940 PIK3C2BO00750 1634 aa19.19■□□□□ 0.66
LINC00839-202ENST00000429940 MTHFSP49914 203 aa19.18■□□□□ 0.66
LINC00839-202ENST00000429940 CFAP53Q96M91 514 aa19.18■□□□□ 0.66
LINC00839-202ENST00000429940 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
LINC00839-202ENST00000429940 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
LINC00839-202ENST00000429940 CCDC27Q2M243 656 aa19.18■□□□□ 0.66
LINC00839-202ENST00000429940 PPLO60437 1756 aa19.17■□□□□ 0.66
LINC00839-202ENST00000429940 PDZRN3Q9UPQ7 1066 aa19.17■□□□□ 0.66
LINC00839-202ENST00000429940 SLKQ9H2G2 1235 aaPredicted RBP19.17■□□□□ 0.66
LINC00839-202ENST00000429940 RWDD1Q9H446 243 aaPredicted RBP19.16■□□□□ 0.66
LINC00839-202ENST00000429940 C14orf93Q9H972 538 aaKnown RBP19.16■□□□□ 0.66
LINC00839-202ENST00000429940 STAG3Q9UJ98 1225 aa19.16■□□□□ 0.66
LINC00839-202ENST00000429940 ADGRB1O14514 1584 aa19.16■□□□□ 0.66
LINC00839-202ENST00000429940 FER1L4A9Z1Z3 1794 aa19.16■□□□□ 0.66
LINC00839-202ENST00000429940 MYH16Q9H6N6 1097 aa19.16■□□□□ 0.66
LINC00839-202ENST00000429940 TBC1D32Q96NH3 1257 aa19.14■□□□□ 0.66
LINC00839-202ENST00000429940 TMEM132EQ6IEE7 984 aa19.14■□□□□ 0.65
LINC00839-202ENST00000429940 SPATA31D1Q6ZQQ2 1576 aa19.13■□□□□ 0.65
LINC00839-202ENST00000429940 POGKQ9P215 609 aa19.12■□□□□ 0.65
LINC00839-202ENST00000429940 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
LINC00839-202ENST00000429940 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
LINC00839-202ENST00000429940 C3P01024 1663 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms