RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
CDC42BPA-206ENST00000429440 E9PSI1 815 aa11.06□□□□□ -0.64
CDC42BPA-206ENST00000429440 TULP2O00295 520 aa11.06□□□□□ -0.64
CDC42BPA-206ENST00000429440 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 ZNF771Q7L3S4 317 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 PTPRGP23470 1445 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 ANKRD50Q9ULJ7 1429 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 KIAA1107Q9UPP5 1409 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 INSRP06213 1382 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 ARHGEF5Q12774 1597 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 SAMD9LQ8IVG5 1584 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 TIGD1Q96MW7 591 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 FEZ1Q99689 392 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 C9orf84Q5VXU9 1444 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 PREX2Q70Z35 1606 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 ANKRD30AQ9BXX3 1397 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 ERCC6L2Q5T890 1561 aa11.05□□□□□ -0.64
CDC42BPA-206ENST00000429440 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
CDC42BPA-206ENST00000429440 SEC24BO95487 1268 aa11.04□□□□□ -0.64
CDC42BPA-206ENST00000429440 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-206ENST00000429440 KCNG1Q9UIX4 513 aa11.04□□□□□ -0.64
CDC42BPA-206ENST00000429440 KDM5DQ9BY66 1539 aa11.04□□□□□ -0.64
CDC42BPA-206ENST00000429440 CNPY4Q8N129 248 aa11.03□□□□□ -0.64
CDC42BPA-206ENST00000429440 GBP4Q96PP9 640 aa11.03□□□□□ -0.64
CDC42BPA-206ENST00000429440 PANK3Q9H999 370 aa11.03□□□□□ -0.64
CDC42BPA-206ENST00000429440 SLC52A1Q9NWF4 448 aa11.03□□□□□ -0.64
CDC42BPA-206ENST00000429440 SOX12O15370 315 aa11.02□□□□□ -0.64
CDC42BPA-206ENST00000429440 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.64
CDC42BPA-206ENST00000429440 EFCC1Q9HA90 598 aa11.02□□□□□ -0.64
CDC42BPA-206ENST00000429440 CIZ1Q9ULV3 898 aaPredicted RBP11.02□□□□□ -0.64
CDC42BPA-206ENST00000429440 ZMYM4Q5VZL5 1548 aa11.02□□□□□ -0.65
CDC42BPA-206ENST00000429440 TTC37Q6PGP7 1564 aa11.02□□□□□ -0.65
CDC42BPA-206ENST00000429440 RALBP1Q15311 655 aa11.01□□□□□ -0.65
CDC42BPA-206ENST00000429440 APPP05067 770 aa11.01□□□□□ -0.65
CDC42BPA-206ENST00000429440 DDIT3P35638 169 aa11.01□□□□□ -0.65
CDC42BPA-206ENST00000429440 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPA-206ENST00000429440 CCDC39Q9UFE4 941 aa11.01□□□□□ -0.65
CDC42BPA-206ENST00000429440 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
CDC42BPA-206ENST00000429440 OGFRQ9NZT2 677 aa11□□□□□ -0.65
CDC42BPA-206ENST00000429440 CALCOCO1Q9P1Z2 691 aa11□□□□□ -0.65
CDC42BPA-206ENST00000429440 PLEKHH2Q8IVE3 1493 aa11□□□□□ -0.65
CDC42BPA-206ENST00000429440 PTMAP06454 111 aaKnown RBP11□□□□□ -0.65
CDC42BPA-206ENST00000429440 FAM193AP78312 1265 aa11□□□□□ -0.65
CDC42BPA-206ENST00000429440 PKD2Q13563 968 aa11□□□□□ -0.65
CDC42BPA-206ENST00000429440 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
CDC42BPA-206ENST00000429440 PDCL2Q8N4E4 241 aa11□□□□□ -0.65
CDC42BPA-206ENST00000429440 ZNF445P59923 1031 aa10.99□□□□□ -0.65
CDC42BPA-206ENST00000429440 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-206ENST00000429440 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-206ENST00000429440 BCORL1Q5H9F3 1711 aa10.99□□□□□ -0.65
CDC42BPA-206ENST00000429440 MYBBP1AQ9BQG0 1328 aaKnown RBP10.99□□□□□ -0.65
CDC42BPA-206ENST00000429440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDC42BPA-206ENST00000429440 HNRNPMP52272 730 aaKnown RBP eCLIP10.99□□□□□ -0.655e-11■■■■■ 37.4
CDC42BPA-206ENST00000429440 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
CDC42BPA-206ENST00000429440 CAPN2P17655 700 aa10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 CCDC141Q6ZP82 1450 aa10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 MAPK8IP2Q13387 824 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 CDCA7LQ96GN5 454 aa10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 ABCC2Q92887 1545 aa10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 KIF15Q9NS87 1388 aa10.98□□□□□ -0.65
CDC42BPA-206ENST00000429440 KLHL40Q2TBA0 621 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 AEBP1Q8IUX7 1158 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 NUP155O75694 1391 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 SYCP2Q9BX26 1530 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 SENP3-EIF4A1A0A087X0R7 540 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 SLFN14P0C7P3 912 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 KIAA2012Q0VF49 1180 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 TNPO1Q92973 898 aaKnown RBP10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 TRIM34Q9BYJ4 488 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 KDM5CP41229 1560 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 ARHGAP31Q2M1Z3 1444 aa10.97□□□□□ -0.65
CDC42BPA-206ENST00000429440 CLASP1Q7Z460 1538 aa10.96□□□□□ -0.65
CDC42BPA-206ENST00000429440 MAST1Q9Y2H9 1570 aa10.96□□□□□ -0.65
CDC42BPA-206ENST00000429440 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
CDC42BPA-206ENST00000429440 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
CDC42BPA-206ENST00000429440 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.65
CDC42BPA-206ENST00000429440 GRIPAP1Q4V328 841 aa10.96□□□□□ -0.66
CDC42BPA-206ENST00000429440 CREBRFQ8IUR6 639 aa10.96□□□□□ -0.66
CDC42BPA-206ENST00000429440 ANKRD7Q92527 254 aa10.96□□□□□ -0.66
CDC42BPA-206ENST00000429440 RAB3GAP1Q15042 981 aa10.95□□□□□ -0.66
CDC42BPA-206ENST00000429440 NGEFQ8N5V2 710 aa10.95□□□□□ -0.66
CDC42BPA-206ENST00000429440 IGSF3O75054 1194 aa10.95□□□□□ -0.66
CDC42BPA-206ENST00000429440 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-206ENST00000429440 CLEC17AQ6ZS10 378 aa10.95□□□□□ -0.66
CDC42BPA-206ENST00000429440 ARHGEF12Q9NZN5 1544 aa10.95□□□□□ -0.66
CDC42BPA-206ENST00000429440 MYO5CQ9NQX4 1742 aa10.95□□□□□ -0.66
CDC42BPA-206ENST00000429440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 SMC5Q8IY18 1101 aa10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 GOLGA6L22H0YM25 854 aa10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-206ENST00000429440 UNC13BO14795 1591 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms