RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 APAF1O14727 1248 aa11.43□□□□□ -0.58
CDH13-202ENST00000428848 PLEKHG5O94827 1062 aa11.43□□□□□ -0.58
CDH13-202ENST00000428848 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
CDH13-202ENST00000428848 FRMPD1Q5SYB0 1578 aa11.42□□□□□ -0.58
CDH13-202ENST00000428848 KIF1BO60333 1816 aa11.42□□□□□ -0.58
CDH13-202ENST00000428848 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
CDH13-202ENST00000428848 POLR3AO14802 1390 aaPredicted RBP11.42□□□□□ -0.58
CDH13-202ENST00000428848 SBNO2Q9Y2G9 1366 aa11.42□□□□□ -0.58
CDH13-202ENST00000428848 BCAR3O75815 825 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 SHPRHQ149N8 1683 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 PDE3AQ14432 1141 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 DMRT2Q9Y5R5 561 aa11.41□□□□□ -0.58
CDH13-202ENST00000428848 RPGRIP1LQ68CZ1 1315 aa11.4□□□□□ -0.58
CDH13-202ENST00000428848 USP19O94966 1318 aa11.39□□□□□ -0.59
CDH13-202ENST00000428848 RICTORQ6R327 1708 aa11.39□□□□□ -0.59
CDH13-202ENST00000428848 IGHDP01880 384 aa11.39□□□□□ -0.59
CDH13-202ENST00000428848 CGNL1Q0VF96 1302 aa11.39□□□□□ -0.59
CDH13-202ENST00000428848 MROH2AA6NES4 1674 aa11.39□□□□□ -0.59
CDH13-202ENST00000428848 RGS3P49796 1198 aa11.38□□□□□ -0.59
CDH13-202ENST00000428848 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
CDH13-202ENST00000428848 ZC3H13Q5T200 1668 aaKnown RBP11.38□□□□□ -0.59
CDH13-202ENST00000428848 UGGT1Q9NYU2 1555 aa11.38□□□□□ -0.59
CDH13-202ENST00000428848 SETBP1Q9Y6X0 1596 aa11.38□□□□□ -0.59
CDH13-202ENST00000428848 ADGRF5Q8IZF2 1346 aa11.38□□□□□ -0.59
CDH13-202ENST00000428848 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
CDH13-202ENST00000428848 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
CDH13-202ENST00000428848 GLIPR1L2Q4G1C9 344 aa11.37□□□□□ -0.59
CDH13-202ENST00000428848 GGT6Q6P531 493 aa11.37□□□□□ -0.59
CDH13-202ENST00000428848 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
CDH13-202ENST00000428848 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
CDH13-202ENST00000428848 IQSEC2Q5JU85 1478 aa11.37□□□□□ -0.59
CDH13-202ENST00000428848 ADGRB3O60242 1522 aa11.36□□□□□ -0.59
CDH13-202ENST00000428848 USP32Q8NFA0 1604 aa11.36□□□□□ -0.59
CDH13-202ENST00000428848 NLRP1Q9C000 1473 aa11.36□□□□□ -0.59
CDH13-202ENST00000428848 CENPJQ9HC77 1338 aaPredicted RBP11.36□□□□□ -0.59
CDH13-202ENST00000428848 FRAT1Q92837 279 aaPredicted RBP11.35□□□□□ -0.59
CDH13-202ENST00000428848 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
CDH13-202ENST00000428848 ABCC3O15438 1527 aa11.35□□□□□ -0.59
CDH13-202ENST00000428848 ZMYM3Q14202 1370 aa11.35□□□□□ -0.59
CDH13-202ENST00000428848 NPATQ14207 1427 aa11.35□□□□□ -0.59
CDH13-202ENST00000428848 MAPK8IP3Q9UPT6 1336 aa11.34□□□□□ -0.59
CDH13-202ENST00000428848 AAMPQ13685 434 aa11.34□□□□□ -0.59
CDH13-202ENST00000428848 CAMSAP1Q5T5Y3 1602 aa11.34□□□□□ -0.59
CDH13-202ENST00000428848 ARHGAP31Q2M1Z3 1444 aa11.34□□□□□ -0.59
CDH13-202ENST00000428848 FRAT2O75474 233 aaPredicted RBP11.33□□□□□ -0.6
CDH13-202ENST00000428848 PPLO60437 1756 aa11.33□□□□□ -0.6
CDH13-202ENST00000428848 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
CDH13-202ENST00000428848 NCBP3Q53F19 620 aaKnown RBP11.33□□□□□ -0.6
CDH13-202ENST00000428848 QRICH2Q9H0J4 1663 aa11.33□□□□□ -0.6
CDH13-202ENST00000428848 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
CDH13-202ENST00000428848 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
CDH13-202ENST00000428848 RARSP54136 660 aaKnown RBP11.32□□□□□ -0.6
CDH13-202ENST00000428848 PANK1Q8TE04 598 aa11.32□□□□□ -0.6
CDH13-202ENST00000428848 COG6Q9Y2V7 657 aa11.32□□□□□ -0.6
CDH13-202ENST00000428848 PIK3C2BO00750 1634 aa11.32□□□□□ -0.6
CDH13-202ENST00000428848 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
CDH13-202ENST00000428848 SEC24BO95487 1268 aa11.31□□□□□ -0.6
CDH13-202ENST00000428848 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
CDH13-202ENST00000428848 SLC52A1Q9NWF4 448 aa11.31□□□□□ -0.6
CDH13-202ENST00000428848 PPP6R1Q9UPN7 881 aa11.31□□□□□ -0.6
CDH13-202ENST00000428848 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
CDH13-202ENST00000428848 WDR63Q8IWG1 891 aa11.31□□□□□ -0.6
CDH13-202ENST00000428848 NOS1P29475 1434 aa11.3□□□□□ -0.6
CDH13-202ENST00000428848 REREQ9P2R6 1566 aa11.3□□□□□ -0.6
CDH13-202ENST00000428848 PMFBP1Q8TBY8 1022 aa11.3□□□□□ -0.6
CDH13-202ENST00000428848 C14orf93Q9H972 538 aaKnown RBP11.3□□□□□ -0.6
CDH13-202ENST00000428848 PCDHB15Q9Y5E8 787 aa11.29□□□□□ -0.6
CDH13-202ENST00000428848 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
CDH13-202ENST00000428848 RLBP1P12271 317 aa11.28□□□□□ -0.6
CDH13-202ENST00000428848 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
CDH13-202ENST00000428848 TCP11L2Q8N4U5 519 aa11.28□□□□□ -0.6
CDH13-202ENST00000428848 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
CDH13-202ENST00000428848 SIGLEC1Q9BZZ2 1709 aa11.27□□□□□ -0.6
CDH13-202ENST00000428848 SLC12A5Q9H2X9 1139 aa11.27□□□□□ -0.6
CDH13-202ENST00000428848 CANXP27824 592 aaKnown RBP11.27□□□□□ -0.61
CDH13-202ENST00000428848 ANTXR1Q9H6X2 564 aa11.27□□□□□ -0.61
CDH13-202ENST00000428848 ZFYVE9O95405 1425 aa11.26□□□□□ -0.61
CDH13-202ENST00000428848 BECN1Q14457 450 aa11.26□□□□□ -0.61
CDH13-202ENST00000428848 TNNQ9UQP3 1299 aa11.26□□□□□ -0.61
CDH13-202ENST00000428848 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
CDH13-202ENST00000428848 TBC1D32Q96NH3 1257 aa11.26□□□□□ -0.61
CDH13-202ENST00000428848 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
CDH13-202ENST00000428848 RRP7AQ9Y3A4 280 aaKnown RBP11.26□□□□□ -0.61
CDH13-202ENST00000428848 ARHGEF28Q8N1W1 1705 aaKnown RBP11.25□□□□□ -0.61
CDH13-202ENST00000428848 AGLP35573 1532 aa11.25□□□□□ -0.61
CDH13-202ENST00000428848 NSD2O96028 1365 aa11.25□□□□□ -0.61
CDH13-202ENST00000428848 MTHFSP49914 203 aa11.24□□□□□ -0.61
CDH13-202ENST00000428848 TRAK1Q9UPV9 953 aa11.24□□□□□ -0.61
CDH13-202ENST00000428848 YEATS2Q9ULM3 1422 aa11.24□□□□□ -0.61
CDH13-202ENST00000428848 TULP4Q9NRJ4 1543 aa11.24□□□□□ -0.61
CDH13-202ENST00000428848 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
CDH13-202ENST00000428848 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
CDH13-202ENST00000428848 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
CDH13-202ENST00000428848 CT47B1P0C2W7 299 aaPredicted RBP11.23□□□□□ -0.61
CDH13-202ENST00000428848 RWDD1Q9H446 243 aaPredicted RBP11.23□□□□□ -0.61
CDH13-202ENST00000428848 EVC2Q86UK5 1308 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms