RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
SP1-202ENST00000426431 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
SP1-202ENST00000426431 DENND4BO75064 1496 aaPredicted RBP12.47□□□□□ -0.41
SP1-202ENST00000426431 MSH5O43196 834 aa12.46□□□□□ -0.41
SP1-202ENST00000426431 ZNF428Q96B54 188 aa12.46□□□□□ -0.41
SP1-202ENST00000426431 TRDNQ13061 729 aa12.46□□□□□ -0.41
SP1-202ENST00000426431 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.41
SP1-202ENST00000426431 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
SP1-202ENST00000426431 USP35Q9P2H5 1018 aa12.46□□□□□ -0.42
SP1-202ENST00000426431 MARCH6O60337 910 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 KCNH5Q8NCM2 988 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
SP1-202ENST00000426431 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 SYTL4Q96C24 671 aaPredicted RBP12.45□□□□□ -0.42
SP1-202ENST00000426431 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 FAM184AQ8NB25 1140 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
SP1-202ENST00000426431 SF3A1Q15459 793 aaKnown RBP12.45□□□□□ -0.42
SP1-202ENST00000426431 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
SP1-202ENST00000426431 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
SP1-202ENST00000426431 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 SKOR2Q2VWA4 1001 aaPredicted RBP12.44□□□□□ -0.42
SP1-202ENST00000426431 ARHGEF11O15085 1522 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
SP1-202ENST00000426431 CDK19Q9BWU1 502 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 H3BQV1 296 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 ERC1Q8IUD2 1116 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 RILPL2Q969X0 211 aa12.44□□□□□ -0.42
SP1-202ENST00000426431 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
SP1-202ENST00000426431 MTHFSP49914 203 aa12.43□□□□□ -0.42
SP1-202ENST00000426431 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
SP1-202ENST00000426431 TRIM29Q14134 588 aa12.43□□□□□ -0.42
SP1-202ENST00000426431 RAPGEF3O95398 923 aa12.43□□□□□ -0.42
SP1-202ENST00000426431 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
SP1-202ENST00000426431 HIP1O00291 1037 aa12.43□□□□□ -0.42
SP1-202ENST00000426431 IPO9Q96P70 1041 aaKnown RBP12.43□□□□□ -0.42
SP1-202ENST00000426431 RBM19Q9Y4C8 960 aaKnown RBP12.42□□□□□ -0.42
SP1-202ENST00000426431 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
SP1-202ENST00000426431 UBTFL1P0CB47 393 aaPredicted RBP12.42□□□□□ -0.42
SP1-202ENST00000426431 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
SP1-202ENST00000426431 ERICH2A1L162 156 aa12.41□□□□□ -0.42
SP1-202ENST00000426431 LRPPRCP42704 1394 aaKnown RBP12.41□□□□□ -0.42
SP1-202ENST00000426431 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
SP1-202ENST00000426431 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
SP1-202ENST00000426431 NAIPQ13075 1403 aa12.41□□□□□ -0.42
SP1-202ENST00000426431 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
SP1-202ENST00000426431 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.42
SP1-202ENST00000426431 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
SP1-202ENST00000426431 TPM2P07951 284 aa12.4□□□□□ -0.42
SP1-202ENST00000426431 COG6Q9Y2V7 657 aa12.4□□□□□ -0.42
SP1-202ENST00000426431 FANCAO15360 1455 aa12.39□□□□□ -0.43
SP1-202ENST00000426431 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
SP1-202ENST00000426431 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
SP1-202ENST00000426431 HMOX1P09601 288 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 CPLX1O14810 134 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
SP1-202ENST00000426431 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 TCEAL9Q9UHQ7 104 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
SP1-202ENST00000426431 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
SP1-202ENST00000426431 GNL3LQ9NVN8 582 aaKnown RBP12.37□□□□□ -0.43
SP1-202ENST00000426431 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
SP1-202ENST00000426431 FCHSD2O94868 740 aa12.37□□□□□ -0.43
SP1-202ENST00000426431 ABCC5O15440 1437 aa12.37□□□□□ -0.43
SP1-202ENST00000426431 PRKAR2BP31323 418 aa12.37□□□□□ -0.43
SP1-202ENST00000426431 NSD2O96028 1365 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 PSMA5P28066 241 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 CABP1Q9NZU7 370 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 TPM1P09493 284 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
SP1-202ENST00000426431 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 SLKQ9H2G2 1235 aaPredicted RBP12.36□□□□□ -0.43
SP1-202ENST00000426431 DHX29Q7Z478 1369 aaKnown RBP12.36□□□□□ -0.43
SP1-202ENST00000426431 APPP05067 770 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 NCOA1Q15788 1441 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 SLC3A2P08195 630 aaKnown RBP12.36□□□□□ -0.43
SP1-202ENST00000426431 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
SP1-202ENST00000426431 GOLGA6L3A6NEY3 463 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 SAFBQ15424 915 aaKnown RBP eCLIP12.35□□□□□ -0.43
SP1-202ENST00000426431 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
SP1-202ENST00000426431 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 VPS53Q5VIR6 699 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 TOM1L2Q6ZVM7 507 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 RAPGEF6Q8TEU7 1601 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 XBP1P17861 261 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 CABP4P57796 275 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 TPM3P06753 285 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
SP1-202ENST00000426431 NAP1L5Q96NT1 182 aaPredicted RBP12.35□□□□□ -0.43
SP1-202ENST00000426431 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
SP1-202ENST00000426431 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
SP1-202ENST00000426431 WDR97A6NE52 1622 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms