RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 NINLQ9Y2I6 1382 aa19.55■□□□□ 0.72
CDK3-201ENST00000425876 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
CDK3-201ENST00000425876 LTKP29376 864 aa19.54■□□□□ 0.72
CDK3-201ENST00000425876 CC2D1BQ5T0F9 858 aaKnown RBP19.54■□□□□ 0.72
CDK3-201ENST00000425876 ADAMTS13Q76LX8 1427 aa19.54■□□□□ 0.72
CDK3-201ENST00000425876 METP08581 1390 aa19.54■□□□□ 0.72
CDK3-201ENST00000425876 STRCQ7RTU9 1775 aa19.54■□□□□ 0.72
CDK3-201ENST00000425876 KNDC1Q76NI1 1749 aa19.54■□□□□ 0.72
CDK3-201ENST00000425876 FAM135BQ49AJ0 1406 aa19.53■□□□□ 0.72
CDK3-201ENST00000425876 TXNDC2Q86VQ3 553 aa19.53■□□□□ 0.72
CDK3-201ENST00000425876 PNISRQ8TF01 805 aaKnown RBP19.53■□□□□ 0.72
CDK3-201ENST00000425876 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
CDK3-201ENST00000425876 MED14O60244 1454 aa19.53■□□□□ 0.72
CDK3-201ENST00000425876 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
CDK3-201ENST00000425876 ATAD2Q6PL18 1390 aa19.52■□□□□ 0.72
CDK3-201ENST00000425876 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
CDK3-201ENST00000425876 CARD14Q9BXL6 1004 aa19.51■□□□□ 0.71
CDK3-201ENST00000425876 SAFB2Q14151 953 aaKnown RBP eCLIP19.5■□□□□ 0.71
CDK3-201ENST00000425876 CPS1P31327 1500 aa19.5■□□□□ 0.71
CDK3-201ENST00000425876 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
CDK3-201ENST00000425876 SLC12A5Q9H2X9 1139 aa19.49■□□□□ 0.71
CDK3-201ENST00000425876 ANKRD36BQ8N2N9 1353 aa19.49■□□□□ 0.71
CDK3-201ENST00000425876 BCANQ96GW7 911 aa19.49■□□□□ 0.71
CDK3-201ENST00000425876 MINK1Q8N4C8 1332 aaPredicted RBP19.48■□□□□ 0.71
CDK3-201ENST00000425876 CABP2Q9NPB3 220 aa19.48■□□□□ 0.71
CDK3-201ENST00000425876 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
CDK3-201ENST00000425876 DIP2AQ14689 1571 aa19.47■□□□□ 0.71
CDK3-201ENST00000425876 TBX22Q9Y458 520 aa19.47■□□□□ 0.71
CDK3-201ENST00000425876 SRPK2P78362 688 aaKnown RBP19.46■□□□□ 0.71
CDK3-201ENST00000425876 INSRP06213 1382 aa19.46■□□□□ 0.71
CDK3-201ENST00000425876 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.7
CDK3-201ENST00000425876 WAPLQ7Z5K2 1190 aa19.45■□□□□ 0.7
CDK3-201ENST00000425876 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
CDK3-201ENST00000425876 PLEKHH1Q9ULM0 1364 aa19.45■□□□□ 0.7
CDK3-201ENST00000425876 PPP2R1AP30153 589 aa19.44■□□□□ 0.7
CDK3-201ENST00000425876 CDK19Q9BWU1 502 aa19.44■□□□□ 0.7
CDK3-201ENST00000425876 ZBED9Q6R2W3 1325 aa19.44■□□□□ 0.7
CDK3-201ENST00000425876 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
CDK3-201ENST00000425876 NSD2O96028 1365 aa19.42■□□□□ 0.7
CDK3-201ENST00000425876 CGNL1Q0VF96 1302 aa19.41■□□□□ 0.7
CDK3-201ENST00000425876 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
CDK3-201ENST00000425876 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
CDK3-201ENST00000425876 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
CDK3-201ENST00000425876 ROBO2Q9HCK4 1378 aa19.4■□□□□ 0.7
CDK3-201ENST00000425876 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
CDK3-201ENST00000425876 PTPRUQ92729 1446 aa19.38■□□□□ 0.69
CDK3-201ENST00000425876 A0A1W2PP64 1363 aa19.38■□□□□ 0.69
CDK3-201ENST00000425876 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
CDK3-201ENST00000425876 CD163L1Q9NR16 1453 aa19.38■□□□□ 0.69
CDK3-201ENST00000425876 PTCH1Q13635 1447 aa19.38■□□□□ 0.69
CDK3-201ENST00000425876 ANKLE2Q86XL3 938 aa19.37■□□□□ 0.69
CDK3-201ENST00000425876 ADGRB2O60241 1585 aa19.37■□□□□ 0.69
CDK3-201ENST00000425876 ATP7BP35670 1465 aa19.37■□□□□ 0.69
CDK3-201ENST00000425876 HDGFL2Q7Z4V5 671 aaPredicted RBP19.36■□□□□ 0.69
CDK3-201ENST00000425876 MORC1Q86VD1 984 aa19.34■□□□□ 0.69
CDK3-201ENST00000425876 AMOTL2Q9Y2J4 779 aa19.34■□□□□ 0.69
CDK3-201ENST00000425876 CABP1Q9NZU7 370 aa19.33■□□□□ 0.69
CDK3-201ENST00000425876 XRN1Q8IZH2 1706 aaKnown RBP19.32■□□□□ 0.68
CDK3-201ENST00000425876 BLMP54132 1417 aaPredicted RBP19.32■□□□□ 0.68
CDK3-201ENST00000425876 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
CDK3-201ENST00000425876 POLR3AO14802 1390 aaPredicted RBP19.31■□□□□ 0.68
CDK3-201ENST00000425876 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
CDK3-201ENST00000425876 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.3■□□□□ 0.68
CDK3-201ENST00000425876 NUDT16Q96DE0 195 aaKnown RBP19.3■□□□□ 0.68
CDK3-201ENST00000425876 CPSF1Q10570 1443 aaKnown RBP19.3■□□□□ 0.68
CDK3-201ENST00000425876 PPIP5K1Q6PFW1 1433 aa19.29■□□□□ 0.68
CDK3-201ENST00000425876 NPHP4O75161 1426 aaPredicted RBP19.28■□□□□ 0.68
CDK3-201ENST00000425876 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
CDK3-201ENST00000425876 FBXO41Q8TF61 875 aa19.27■□□□□ 0.68
CDK3-201ENST00000425876 CDC42BPGQ6DT37 1551 aa19.26■□□□□ 0.67
CDK3-201ENST00000425876 FYB1O15117 783 aa19.26■□□□□ 0.67
CDK3-201ENST00000425876 ADAMTS8Q9UP79 889 aa19.26■□□□□ 0.67
CDK3-201ENST00000425876 ANKRD26Q9UPS8 1709 aa19.25■□□□□ 0.67
CDK3-201ENST00000425876 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
CDK3-201ENST00000425876 ZNF692Q9BU19 519 aaPredicted RBP19.24■□□□□ 0.67
CDK3-201ENST00000425876 PRR36Q9H6K5 1346 aa19.24■□□□□ 0.67
CDK3-201ENST00000425876 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
CDK3-201ENST00000425876 PLEKHG3A1L390 1219 aa19.23■□□□□ 0.67
CDK3-201ENST00000425876 CHD2O14647 1828 aaKnown RBP19.22■□□□□ 0.67
CDK3-201ENST00000425876 TOPAZ1Q8N9V7 1692 aa19.22■□□□□ 0.67
CDK3-201ENST00000425876 KCNA6P17658 529 aa19.22■□□□□ 0.67
CDK3-201ENST00000425876 LTBP4Q8N2S1 1624 aa19.21■□□□□ 0.67
CDK3-201ENST00000425876 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
CDK3-201ENST00000425876 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
CDK3-201ENST00000425876 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
CDK3-201ENST00000425876 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
CDK3-201ENST00000425876 ZNF335Q9H4Z2 1342 aaPredicted RBP19.2■□□□□ 0.66
CDK3-201ENST00000425876 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
CDK3-201ENST00000425876 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
CDK3-201ENST00000425876 MTHFSP49914 203 aa19.19■□□□□ 0.66
CDK3-201ENST00000425876 TNNT2P45379 298 aaPredicted RBP19.19■□□□□ 0.66
CDK3-201ENST00000425876 CERKQ8TCT0 537 aa19.19■□□□□ 0.66
CDK3-201ENST00000425876 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
CDK3-201ENST00000425876 ANKARQ7Z5J8 1434 aa19.18■□□□□ 0.66
CDK3-201ENST00000425876 ITSN1Q15811 1721 aa19.18■□□□□ 0.66
CDK3-201ENST00000425876 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
CDK3-201ENST00000425876 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
CDK3-201ENST00000425876 NEFLP07196 543 aa19.15■□□□□ 0.66
CDK3-201ENST00000425876 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
CDK3-201ENST00000425876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms