RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
HDAC9-209ENST00000425071 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
HDAC9-209ENST00000425071 ADH1BP00325 375 aa8.39□□□□□ -1.07
HDAC9-209ENST00000425071 MTMR2Q13614 643 aa8.39□□□□□ -1.07
HDAC9-209ENST00000425071 RETREG3Q86VR2 466 aa8.39□□□□□ -1.07
HDAC9-209ENST00000425071 SPSB2Q99619 263 aa8.39□□□□□ -1.07
HDAC9-209ENST00000425071 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
HDAC9-209ENST00000425071 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
HDAC9-209ENST00000425071 PCDHGC3Q9UN70 934 aa8.39□□□□□ -1.07
HDAC9-209ENST00000425071 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
HDAC9-209ENST00000425071 ZNF516Q92618 1163 aa8.38□□□□□ -1.07
HDAC9-209ENST00000425071 HLA-CQ95604 372 aa8.38□□□□□ -1.07
HDAC9-209ENST00000425071 USB1Q9BQ65 265 aaKnown RBP8.38□□□□□ -1.07
HDAC9-209ENST00000425071 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
HDAC9-209ENST00000425071 LILRB3O75022 631 aa8.37□□□□□ -1.07
HDAC9-209ENST00000425071 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
HDAC9-209ENST00000425071 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
HDAC9-209ENST00000425071 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-209ENST00000425071 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
HDAC9-209ENST00000425071 HRCP23327 699 aa8.36□□□□□ -1.07
HDAC9-209ENST00000425071 GGCXP38435 758 aa8.36□□□□□ -1.07
HDAC9-209ENST00000425071 NUTM2BA6NNL0 878 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-209ENST00000425071 NUTM2EB1AL46 878 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-209ENST00000425071 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-209ENST00000425071 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
HDAC9-209ENST00000425071 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
HDAC9-209ENST00000425071 NUTM2AQ8IVF1 878 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-209ENST00000425071 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-209ENST00000425071 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
HDAC9-209ENST00000425071 CSPP1Q1MSJ5 1256 aa8.33□□□□□ -1.08
HDAC9-209ENST00000425071 MMP16P51512 607 aa8.32□□□□□ -1.08
HDAC9-209ENST00000425071 QPCTQ16769 361 aa8.32□□□□□ -1.08
HDAC9-209ENST00000425071 FAM160A2Q8N612 972 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-209ENST00000425071 TLL1O43897 1013 aa8.31□□□□□ -1.08
HDAC9-209ENST00000425071 TMEM259Q4ZIN3 620 aa8.31□□□□□ -1.08
HDAC9-209ENST00000425071 HELBQ8NG08 1087 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-209ENST00000425071 NKX2-3Q8TAU0 364 aa8.31□□□□□ -1.08
HDAC9-209ENST00000425071 PRR7Q8TB68 274 aa8.31□□□□□ -1.08
HDAC9-209ENST00000425071 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
HDAC9-209ENST00000425071 JUNDP17535 347 aa8.3□□□□□ -1.08
HDAC9-209ENST00000425071 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
HDAC9-209ENST00000425071 DXOO77932 396 aaKnown RBP8.29□□□□□ -1.08
HDAC9-209ENST00000425071 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-209ENST00000425071 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.29□□□□□ -1.08
HDAC9-209ENST00000425071 A0A0G2JS52 829 aa8.28□□□□□ -1.08
HDAC9-209ENST00000425071 RFC5P40937 340 aa8.28□□□□□ -1.08
HDAC9-209ENST00000425071 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
HDAC9-209ENST00000425071 BANK1Q8NDB2 785 aa8.28□□□□□ -1.08
HDAC9-209ENST00000425071 CFAP99D6REC4 459 aa8.27□□□□□ -1.09
HDAC9-209ENST00000425071 S1PR4O95977 384 aa8.27□□□□□ -1.09
HDAC9-209ENST00000425071 PTPRNQ16849 979 aa8.27□□□□□ -1.09
HDAC9-209ENST00000425071 ANKLE1Q8NAG6 615 aa8.27□□□□□ -1.09
HDAC9-209ENST00000425071 LYPD8Q6UX82 237 aa8.26□□□□□ -1.09
HDAC9-209ENST00000425071 SOCS7O14512 581 aa8.25□□□□□ -1.09
HDAC9-209ENST00000425071 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
HDAC9-209ENST00000425071 RGS20O76081 388 aa8.24□□□□□ -1.09
HDAC9-209ENST00000425071 TSC1Q92574 1164 aa8.23□□□□□ -1.09
HDAC9-209ENST00000425071 NUDT12Q9BQG2 462 aa8.23□□□□□ -1.09
HDAC9-209ENST00000425071 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
HDAC9-209ENST00000425071 APBB1O00213 710 aa8.22□□□□□ -1.09
HDAC9-209ENST00000425071 AP1G2O75843 785 aa8.22□□□□□ -1.09
HDAC9-209ENST00000425071 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
HDAC9-209ENST00000425071 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-209ENST00000425071 EVA1BQ9NVM1 165 aa8.22□□□□□ -1.09
HDAC9-209ENST00000425071 FCF1Q9Y324 198 aaKnown RBP8.22□□□□□ -1.09
HDAC9-209ENST00000425071 ZBTB24O43167 697 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-209ENST00000425071 CTDSPL2Q05D32 466 aa8.2□□□□□ -1.1
HDAC9-209ENST00000425071 KCNH2Q12809 1159 aa8.2□□□□□ -1.1
HDAC9-209ENST00000425071 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
HDAC9-209ENST00000425071 RPIAP49247 311 aa8.19□□□□□ -1.1
HDAC9-209ENST00000425071 FLIIQ13045 1269 aa8.19□□□□□ -1.1
HDAC9-209ENST00000425071 PPEF1O14829 653 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-209ENST00000425071 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-209ENST00000425071 CCDC24Q8N4L8 307 aa8.18□□□□□ -1.1
HDAC9-209ENST00000425071 PNMA1Q8ND90 353 aa8.18□□□□□ -1.1
HDAC9-209ENST00000425071 ARMC2Q8NEN0 867 aa8.18□□□□□ -1.1
HDAC9-209ENST00000425071 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-209ENST00000425071 PER1O15534 1290 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-209ENST00000425071 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
HDAC9-209ENST00000425071 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
HDAC9-209ENST00000425071 CTHP32929 405 aa8.16□□□□□ -1.1
HDAC9-209ENST00000425071 SLC19A1P41440 591 aa8.15□□□□□ -1.1
HDAC9-209ENST00000425071 ZC3H4Q9UPT8 1303 aaKnown RBP8.14□□□□□ -1.11
HDAC9-209ENST00000425071 LRRN4Q8WUT4 740 aa8.14□□□□□ -1.11
HDAC9-209ENST00000425071 GPKOWQ92917 476 aaPredicted RBP eCLIP8.14□□□□□ -1.11
HDAC9-209ENST00000425071 UNC93B1Q9H1C4 597 aa8.13□□□□□ -1.11
HDAC9-209ENST00000425071 WNT7BP56706 349 aa8.12□□□□□ -1.11
HDAC9-209ENST00000425071 PLA2G2CQ5R387 149 aa8.12□□□□□ -1.11
HDAC9-209ENST00000425071 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
HDAC9-209ENST00000425071 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
HDAC9-209ENST00000425071 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
HDAC9-209ENST00000425071 GTF3C3Q9Y5Q9 886 aa8.12□□□□□ -1.11
HDAC9-209ENST00000425071 TRIM32Q13049 653 aa8.11□□□□□ -1.11
HDAC9-209ENST00000425071 MCM6Q14566 821 aa8.11□□□□□ -1.11
HDAC9-209ENST00000425071 SPRYD7Q5W111 196 aa8.11□□□□□ -1.11
HDAC9-209ENST00000425071 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-209ENST00000425071 LIAT1Q6ZQX7 453 aa8.11□□□□□ -1.11
HDAC9-209ENST00000425071 MTMR14Q8NCE2 650 aa8.11□□□□□ -1.11
HDAC9-209ENST00000425071 SNRKQ9NRH2 765 aa8.11□□□□□ -1.11
HDAC9-209ENST00000425071 NR6A1Q15406 480 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms