RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.3
SREBF2-202ENST00000424354 ST20-MTHFSA0A0A6YYL1 179 aa16.95■□□□□ 0.3
SREBF2-202ENST00000424354 BECN2A8MW95 431 aa16.95■□□□□ 0.3
SREBF2-202ENST00000424354 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
SREBF2-202ENST00000424354 ZNF771Q7L3S4 317 aaPredicted RBP16.95■□□□□ 0.3
SREBF2-202ENST00000424354 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
SREBF2-202ENST00000424354 ZFYVE16Q7Z3T8 1539 aa16.95■□□□□ 0.3
SREBF2-202ENST00000424354 REC8O95072 547 aa16.95■□□□□ 0.3
SREBF2-202ENST00000424354 ADCY10Q96PN6 1610 aa16.95■□□□□ 0.3
SREBF2-202ENST00000424354 H3BQV1 296 aa16.94■□□□□ 0.3
SREBF2-202ENST00000424354 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
SREBF2-202ENST00000424354 FAM43AQ8N2R8 423 aa16.94■□□□□ 0.3
SREBF2-202ENST00000424354 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
SREBF2-202ENST00000424354 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
SREBF2-202ENST00000424354 DUOX2Q9NRD8 1548 aa16.94■□□□□ 0.3
SREBF2-202ENST00000424354 KDM6BO15054 1643 aa16.93■□□□□ 0.3
SREBF2-202ENST00000424354 DHX29Q7Z478 1369 aaKnown RBP16.93■□□□□ 0.3
SREBF2-202ENST00000424354 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
SREBF2-202ENST00000424354 ERBINQ96RT1 1412 aa16.93■□□□□ 0.3
SREBF2-202ENST00000424354 USP47Q96K76 1375 aa16.93■□□□□ 0.3
SREBF2-202ENST00000424354 RAPGEF3O95398 923 aa16.93■□□□□ 0.3
SREBF2-202ENST00000424354 RASSF8Q8NHQ8 419 aa16.93■□□□□ 0.3
SREBF2-202ENST00000424354 COG6Q9Y2V7 657 aa16.92■□□□□ 0.3
SREBF2-202ENST00000424354 AAMPQ13685 434 aa16.92■□□□□ 0.3
SREBF2-202ENST00000424354 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
SREBF2-202ENST00000424354 SLC52A1Q9NWF4 448 aa16.91■□□□□ 0.3
SREBF2-202ENST00000424354 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
SREBF2-202ENST00000424354 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
SREBF2-202ENST00000424354 CCDC144AA2RUR9 1427 aa16.91■□□□□ 0.3
SREBF2-202ENST00000424354 NUCB2P80303 420 aa16.91■□□□□ 0.3
SREBF2-202ENST00000424354 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
SREBF2-202ENST00000424354 TPM1P09493 284 aa16.9■□□□□ 0.3
SREBF2-202ENST00000424354 TEX35Q5T0J7 233 aa16.9■□□□□ 0.3
SREBF2-202ENST00000424354 TSR1Q2NL82 804 aaKnown RBP16.9■□□□□ 0.3
SREBF2-202ENST00000424354 RILPL2Q969X0 211 aa16.9■□□□□ 0.3
SREBF2-202ENST00000424354 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
SREBF2-202ENST00000424354 NFKBIBQ15653 356 aa16.9■□□□□ 0.3
SREBF2-202ENST00000424354 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
SREBF2-202ENST00000424354 TAF7LQ5H9L4 462 aa16.9■□□□□ 0.3
SREBF2-202ENST00000424354 CCDC70Q6NSX1 233 aa16.9■□□□□ 0.3
SREBF2-202ENST00000424354 MRE11P49959 708 aa16.89■□□□□ 0.29
SREBF2-202ENST00000424354 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
SREBF2-202ENST00000424354 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
SREBF2-202ENST00000424354 A2MP01023 1474 aa16.89■□□□□ 0.29
SREBF2-202ENST00000424354 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
SREBF2-202ENST00000424354 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
SREBF2-202ENST00000424354 CREBRFQ8IUR6 639 aa16.87■□□□□ 0.29
SREBF2-202ENST00000424354 RUFY2Q8WXA3 655 aa16.87■□□□□ 0.29
SREBF2-202ENST00000424354 TPD52L1Q16890 204 aaPredicted RBP16.87■□□□□ 0.29
SREBF2-202ENST00000424354 TCOF1Q13428 1488 aaKnown RBP16.87■□□□□ 0.29
SREBF2-202ENST00000424354 ABCA9Q8IUA7 1624 aa16.87■□□□□ 0.29
SREBF2-202ENST00000424354 HFM1A2PYH4 1435 aa16.87■□□□□ 0.29
SREBF2-202ENST00000424354 CCAR2Q8N163 923 aaKnown RBP16.86■□□□□ 0.29
SREBF2-202ENST00000424354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.86■□□□□ 0.299e-7■■□□□ 13.4
SREBF2-202ENST00000424354 DZIP1LQ8IYY4 767 aaKnown RBP16.85■□□□□ 0.29
SREBF2-202ENST00000424354 ZNF592Q92610 1267 aa16.85■□□□□ 0.29
SREBF2-202ENST00000424354 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
SREBF2-202ENST00000424354 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
SREBF2-202ENST00000424354 DIAPH3Q9NSV4 1193 aa16.85■□□□□ 0.29
SREBF2-202ENST00000424354 NUTM2DQ5VT03 806 aaPredicted RBP16.84■□□□□ 0.29
SREBF2-202ENST00000424354 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
SREBF2-202ENST00000424354 CEP89Q96ST8 783 aa16.84■□□□□ 0.29
SREBF2-202ENST00000424354 APAF1O14727 1248 aa16.84■□□□□ 0.29
SREBF2-202ENST00000424354 TPM2P07951 284 aa16.84■□□□□ 0.29
SREBF2-202ENST00000424354 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
SREBF2-202ENST00000424354 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.28
SREBF2-202ENST00000424354 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.28
SREBF2-202ENST00000424354 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
SREBF2-202ENST00000424354 CCDC39Q9UFE4 941 aa16.83■□□□□ 0.28
SREBF2-202ENST00000424354 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
SREBF2-202ENST00000424354 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
SREBF2-202ENST00000424354 PREX2Q70Z35 1606 aa16.82■□□□□ 0.28
SREBF2-202ENST00000424354 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
SREBF2-202ENST00000424354 CCDC7Q96M83 1385 aa16.82■□□□□ 0.28
SREBF2-202ENST00000424354 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
SREBF2-202ENST00000424354 AMPHP49418 695 aa16.81■□□□□ 0.28
SREBF2-202ENST00000424354 ARGLU1Q9NWB6 273 aaPredicted RBP16.81■□□□□ 0.28
SREBF2-202ENST00000424354 ATP7AQ04656 1500 aa16.8■□□□□ 0.28
SREBF2-202ENST00000424354 PES1O00541 588 aaKnown RBP16.8■□□□□ 0.28
SREBF2-202ENST00000424354 LRRFIP1Q32MZ4 808 aaKnown RBP16.8■□□□□ 0.28
SREBF2-202ENST00000424354 CPLX2Q6PUV4 134 aaKnown RBP16.8■□□□□ 0.28
SREBF2-202ENST00000424354 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
SREBF2-202ENST00000424354 MLH3Q9UHC1 1453 aa16.8■□□□□ 0.28
SREBF2-202ENST00000424354 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
SREBF2-202ENST00000424354 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
SREBF2-202ENST00000424354 MCTP1Q6DN14 999 aa16.79■□□□□ 0.28
SREBF2-202ENST00000424354 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
SREBF2-202ENST00000424354 ABCC5O15440 1437 aa16.79■□□□□ 0.28
SREBF2-202ENST00000424354 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
SREBF2-202ENST00000424354 IPO7O95373 1038 aaKnown RBP16.78■□□□□ 0.28
SREBF2-202ENST00000424354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.284e-7■■□□□ 12
SREBF2-202ENST00000424354 BICD2Q8TD16 824 aa16.78■□□□□ 0.28
SREBF2-202ENST00000424354 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
SREBF2-202ENST00000424354 DIP2BQ9P265 1576 aa16.78■□□□□ 0.28
SREBF2-202ENST00000424354 ELL2O00472 640 aaPredicted RBP16.78■□□□□ 0.28
SREBF2-202ENST00000424354 HOOK1Q9UJC3 728 aaKnown RBP16.78■□□□□ 0.28
SREBF2-202ENST00000424354 NUTM2FA1L443 756 aa16.77■□□□□ 0.28
SREBF2-202ENST00000424354 SASS6Q6UVJ0 657 aa16.77■□□□□ 0.28
SREBF2-202ENST00000424354 ANKRD20A12PQ8NF67 263 aa16.77■□□□□ 0.28
SREBF2-202ENST00000424354 AKAP17AQ02040 695 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms