RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 SWT1Q5T5J6 900 aaKnown RBP4.44□□□□□ -1.7
PMS1-210ENST00000424307 ARHGEF15O94989 841 aa4.43□□□□□ -1.7
PMS1-210ENST00000424307 KMT5BQ4FZB7 885 aa4.43□□□□□ -1.7
PMS1-210ENST00000424307 C3orf80F5H4A9 247 aa4.43□□□□□ -1.7
PMS1-210ENST00000424307 TRIM46Q7Z4K8 759 aa4.43□□□□□ -1.7
PMS1-210ENST00000424307 ACTN4O43707 911 aaKnown RBP4.42□□□□□ -1.7
PMS1-210ENST00000424307 SLURP2P0DP57 97 aa4.41□□□□□ -1.7
PMS1-210ENST00000424307 ZNF385CQ66K41 422 aaPredicted RBP4.41□□□□□ -1.7
PMS1-210ENST00000424307 DDX12PQ92771 950 aa4.41□□□□□ -1.7
PMS1-210ENST00000424307 REPIN1Q9BWE0 567 aaKnown RBP4.41□□□□□ -1.7
PMS1-210ENST00000424307 NUDT18Q6ZVK8 323 aa4.41□□□□□ -1.7
PMS1-210ENST00000424307 ZBTB24O43167 697 aaPredicted RBP4.4□□□□□ -1.7
PMS1-210ENST00000424307 ITGB2P05107 769 aa4.4□□□□□ -1.71
PMS1-210ENST00000424307 TSR1Q2NL82 804 aaKnown RBP4.39□□□□□ -1.71
PMS1-210ENST00000424307 PHF20L1A8MW92 1017 aa4.38□□□□□ -1.71
PMS1-210ENST00000424307 RSPH4AQ5TD94 716 aa4.38□□□□□ -1.71
PMS1-210ENST00000424307 DCAF5Q96JK2 942 aa4.38□□□□□ -1.71
PMS1-210ENST00000424307 COBLO75128 1261 aa4.38□□□□□ -1.71
PMS1-210ENST00000424307 SVOPQ8N4V2 548 aa4.37□□□□□ -1.71
PMS1-210ENST00000424307 MRGPRX2Q96LB1 330 aa4.37□□□□□ -1.71
PMS1-210ENST00000424307 DNAJB2P25686 324 aa4.37□□□□□ -1.71
PMS1-210ENST00000424307 BAG6P46379 1132 aa4.37□□□□□ -1.71
PMS1-210ENST00000424307 KRT76Q01546 638 aa4.36□□□□□ -1.71
PMS1-210ENST00000424307 EYA1Q99502 592 aa4.36□□□□□ -1.71
PMS1-210ENST00000424307 RBM46Q8TBY0 533 aaKnown RBP4.36□□□□□ -1.71
PMS1-210ENST00000424307 FCF1Q9Y324 198 aaKnown RBP4.36□□□□□ -1.71
PMS1-210ENST00000424307 CAPN5O15484 640 aaPredicted RBP4.35□□□□□ -1.71
PMS1-210ENST00000424307 CNTNAP3BQ96NU0 1288 aa4.35□□□□□ -1.71
PMS1-210ENST00000424307 SPSB2Q99619 263 aa4.35□□□□□ -1.71
PMS1-210ENST00000424307 CNTNAP3Q9BZ76 1288 aa4.35□□□□□ -1.71
PMS1-210ENST00000424307 PPFIA3O75145 1194 aa4.34□□□□□ -1.71
PMS1-210ENST00000424307 CADPS2Q86UW7 1296 aa4.34□□□□□ -1.71
PMS1-210ENST00000424307 ZFP42Q96MM3 310 aa4.34□□□□□ -1.71
PMS1-210ENST00000424307 BMP1P13497 986 aa4.34□□□□□ -1.72
PMS1-210ENST00000424307 OSBPP22059 807 aa4.34□□□□□ -1.72
PMS1-210ENST00000424307 E2F4Q16254 413 aa4.33□□□□□ -1.72
PMS1-210ENST00000424307 SCUBE3Q8IX30 993 aa4.33□□□□□ -1.72
PMS1-210ENST00000424307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.33□□□□□ -1.72
PMS1-210ENST00000424307 YBX3P16989 372 aaKnown RBP eCLIP4.32□□□□□ -1.72
PMS1-210ENST00000424307 SCARF1Q14162 830 aa4.32□□□□□ -1.72
PMS1-210ENST00000424307 PADI6Q6TGC4 694 aa4.32□□□□□ -1.72
PMS1-210ENST00000424307 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
PMS1-210ENST00000424307 TMEM134Q9H6X4 195 aa4.31□□□□□ -1.72
PMS1-210ENST00000424307 WDR70Q9NW82 654 aa4.31□□□□□ -1.72
PMS1-210ENST00000424307 GRXCR2A6NFK2 248 aa4.3□□□□□ -1.72
PMS1-210ENST00000424307 ENAMQ9NRM1 1142 aa4.3□□□□□ -1.72
PMS1-210ENST00000424307 SALL2Q9Y467 1007 aaPredicted RBP4.3□□□□□ -1.72
PMS1-210ENST00000424307 FURINP09958 794 aa4.3□□□□□ -1.72
PMS1-210ENST00000424307 CFHP08603 1231 aa4.29□□□□□ -1.72
PMS1-210ENST00000424307 MAP3K10Q02779 954 aa4.29□□□□□ -1.72
PMS1-210ENST00000424307 TRIM32Q13049 653 aa4.29□□□□□ -1.72
PMS1-210ENST00000424307 WHAMMQ8TF30 809 aa4.29□□□□□ -1.72
PMS1-210ENST00000424307 NPDC1Q9NQX5 325 aaPredicted RBP4.29□□□□□ -1.72
PMS1-210ENST00000424307 GPR161Q8N6U8 529 aaKnown RBP4.29□□□□□ -1.72
PMS1-210ENST00000424307 PRIM1P49642 420 aaKnown RBP4.28□□□□□ -1.72
PMS1-210ENST00000424307 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
PMS1-210ENST00000424307 OATP04181 439 aa4.27□□□□□ -1.73
PMS1-210ENST00000424307 PODNQ7Z5L7 613 aa4.27□□□□□ -1.73
PMS1-210ENST00000424307 BEND7Q8N7W2 519 aaPredicted RBP4.27□□□□□ -1.73
PMS1-210ENST00000424307 BBXQ8WY36 941 aaPredicted RBP4.27□□□□□ -1.73
PMS1-210ENST00000424307 NANOS1Q8WY41 292 aaKnown RBP4.27□□□□□ -1.73
PMS1-210ENST00000424307 COL25A1Q9BXS0 654 aaPredicted RBP4.27□□□□□ -1.73
PMS1-210ENST00000424307 KRTAP4-5Q9BYR2 181 aa4.27□□□□□ -1.73
PMS1-210ENST00000424307 CDHR5Q9HBB8 845 aa4.27□□□□□ -1.73
PMS1-210ENST00000424307 LAMC2Q13753 1193 aa4.27□□□□□ -1.73
PMS1-210ENST00000424307 ALYREFQ86V81 257 aaKnown RBP4.27□□□□□ -1.73
PMS1-210ENST00000424307 ZMYM1Q5SVZ6 1142 aa4.26□□□□□ -1.73
PMS1-210ENST00000424307 ADGRG1Q9Y653 693 aa4.26□□□□□ -1.73
PMS1-210ENST00000424307 FMNL1O95466 1100 aaPredicted RBP4.26□□□□□ -1.73
PMS1-210ENST00000424307 ALDH1A1P00352 501 aa4.26□□□□□ -1.73
PMS1-210ENST00000424307 TXKP42681 527 aa4.26□□□□□ -1.73
PMS1-210ENST00000424307 RC3H1Q5TC82 1133 aaKnown RBP4.26□□□□□ -1.73
PMS1-210ENST00000424307 WNT7BP56706 349 aa4.25□□□□□ -1.73
PMS1-210ENST00000424307 MSS51Q4VC12 460 aa4.25□□□□□ -1.73
PMS1-210ENST00000424307 MRPL14Q6P1L8 145 aaKnown RBP4.25□□□□□ -1.73
PMS1-210ENST00000424307 RCCD1A6NED2 376 aa4.24□□□□□ -1.73
PMS1-210ENST00000424307 WASF2Q9Y6W5 498 aa4.24□□□□□ -1.73
PMS1-210ENST00000424307 GRIPAP1Q4V328 841 aa4.24□□□□□ -1.73
PMS1-210ENST00000424307 NBPF11Q86T75 865 aa4.24□□□□□ -1.73
PMS1-210ENST00000424307 FAM160A2Q8N612 972 aaPredicted RBP4.23□□□□□ -1.73
PMS1-210ENST00000424307 Q3C1V9 767 aa4.23□□□□□ -1.73
PMS1-210ENST00000424307 THAP11Q96EK4 314 aa4.23□□□□□ -1.73
PMS1-210ENST00000424307 SOBPA7XYQ1 873 aa4.22□□□□□ -1.73
PMS1-210ENST00000424307 ATP6V1AP38606 617 aa4.22□□□□□ -1.73
PMS1-210ENST00000424307 PTGDRQ13258 359 aa4.22□□□□□ -1.73
PMS1-210ENST00000424307 SCO2A0A1W2PP80 73 aa4.21□□□□□ -1.73
PMS1-210ENST00000424307 MAN1A2O60476 641 aa4.21□□□□□ -1.73
PMS1-210ENST00000424307 FCHSD2O94868 740 aa4.21□□□□□ -1.73
PMS1-210ENST00000424307 MORN1Q5T089 497 aa4.21□□□□□ -1.73
PMS1-210ENST00000424307 ARID1BQ8NFD5 2236 aaPredicted RBP4.21□□□□□ -1.74
PMS1-210ENST00000424307 SIAH2O43255 324 aa4.21□□□□□ -1.74
PMS1-210ENST00000424307 SLC10A3P09131 477 aa4.21□□□□□ -1.74
PMS1-210ENST00000424307 ARHGEF1Q92888 912 aaKnown RBP4.21□□□□□ -1.74
PMS1-210ENST00000424307 CNTNAP5Q8WYK1 1306 aa4.21□□□□□ -1.74
PMS1-210ENST00000424307 ITGB7P26010 798 aa4.2□□□□□ -1.74
PMS1-210ENST00000424307 RNFT1Q5M7Z0 435 aa4.2□□□□□ -1.74
PMS1-210ENST00000424307 ARTNQ5T4W7 220 aa4.2□□□□□ -1.74
PMS1-210ENST00000424307 SULF1Q8IWU6 871 aa4.2□□□□□ -1.74
PMS1-210ENST00000424307 SPRYD3Q8NCJ5 442 aa4.2□□□□□ -1.74
PMS1-210ENST00000424307 ZFP64Q9NPA5 681 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms