RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 C1orf167Q5SNV9 1468 aa9.99□□□□□ -0.81
SDCBP-203ENST00000424270 LMTK2Q8IWU2 1503 aa9.99□□□□□ -0.81
SDCBP-203ENST00000424270 C1QTNF8P60827 252 aa9.99□□□□□ -0.81
SDCBP-203ENST00000424270 XPCQ01831 940 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-203ENST00000424270 ZNF784Q8NCA9 323 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-203ENST00000424270 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
SDCBP-203ENST00000424270 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
SDCBP-203ENST00000424270 GLI3P10071 1580 aa9.97□□□□□ -0.81
SDCBP-203ENST00000424270 SPHKAPQ2M3C7 1700 aa9.97□□□□□ -0.81
SDCBP-203ENST00000424270 ZNF326Q5BKZ1 582 aaKnown RBP9.97□□□□□ -0.81
SDCBP-203ENST00000424270 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
SDCBP-203ENST00000424270 NPHP3Q7Z494 1330 aa9.97□□□□□ -0.81
SDCBP-203ENST00000424270 TMEM131LA2VDJ0 1609 aa9.96□□□□□ -0.81
SDCBP-203ENST00000424270 EZH2Q15910 746 aaKnown RBP9.96□□□□□ -0.82
SDCBP-203ENST00000424270 MYOM2P54296 1465 aa9.96□□□□□ -0.82
SDCBP-203ENST00000424270 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.82
SDCBP-203ENST00000424270 NBPF8Q3BBV2 869 aa9.95□□□□□ -0.82
SDCBP-203ENST00000424270 NBPF14Q5TI25 921 aa9.95□□□□□ -0.82
SDCBP-203ENST00000424270 SPON1Q9HCB6 807 aa9.95□□□□□ -0.82
SDCBP-203ENST00000424270 ANKRD30AQ9BXX3 1397 aa9.95□□□□□ -0.82
SDCBP-203ENST00000424270 COL22A1Q8NFW1 1626 aaPredicted RBP9.95□□□□□ -0.82
SDCBP-203ENST00000424270 VPS72Q15906 364 aa9.94□□□□□ -0.82
SDCBP-203ENST00000424270 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
SDCBP-203ENST00000424270 FAM182BQ5T319 152 aa9.94□□□□□ -0.82
SDCBP-203ENST00000424270 NALCNQ8IZF0 1738 aa9.93□□□□□ -0.82
SDCBP-203ENST00000424270 XRN1Q8IZH2 1706 aaKnown RBP9.93□□□□□ -0.82
SDCBP-203ENST00000424270 NINLQ9Y2I6 1382 aa9.93□□□□□ -0.82
SDCBP-203ENST00000424270 FOXO3O43524 673 aa9.93□□□□□ -0.82
SDCBP-203ENST00000424270 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.93□□□□□ -0.82
SDCBP-203ENST00000424270 MARF1Q9Y4F3 1742 aaKnown RBP9.93□□□□□ -0.82
SDCBP-203ENST00000424270 METP08581 1390 aa9.92□□□□□ -0.82
SDCBP-203ENST00000424270 LRPPRCP42704 1394 aaKnown RBP9.92□□□□□ -0.82
SDCBP-203ENST00000424270 LMOD2Q6P5Q4 547 aa9.92□□□□□ -0.82
SDCBP-203ENST00000424270 SLIT2O94813 1529 aa9.92□□□□□ -0.82
SDCBP-203ENST00000424270 GIGYF1O75420 1035 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-203ENST00000424270 APBA3O96018 575 aa9.91□□□□□ -0.82
SDCBP-203ENST00000424270 ABCC5O15440 1437 aa9.9□□□□□ -0.82
SDCBP-203ENST00000424270 RGPD1P0DJD0 1748 aa9.9□□□□□ -0.82
SDCBP-203ENST00000424270 NUTM2FA1L443 756 aa9.9□□□□□ -0.82
SDCBP-203ENST00000424270 KCNQ2O43526 872 aa9.9□□□□□ -0.82
SDCBP-203ENST00000424270 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.83
SDCBP-203ENST00000424270 LAMC1P11047 1609 aa9.89□□□□□ -0.83
SDCBP-203ENST00000424270 ADGRB2O60241 1585 aa9.89□□□□□ -0.83
SDCBP-203ENST00000424270 TRIM37O94972 964 aa9.89□□□□□ -0.83
SDCBP-203ENST00000424270 DAPK1P53355 1430 aa9.89□□□□□ -0.83
SDCBP-203ENST00000424270 ONECUT3O60422 494 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-203ENST00000424270 CAMTA1Q9Y6Y1 1673 aa9.87□□□□□ -0.83
SDCBP-203ENST00000424270 PXDNQ92626 1479 aa9.87□□□□□ -0.83
SDCBP-203ENST00000424270 CABLES1Q8TDN4 633 aa9.87□□□□□ -0.83
SDCBP-203ENST00000424270 ADGRL2O95490 1459 aa9.86□□□□□ -0.83
SDCBP-203ENST00000424270 USP32Q8NFA0 1604 aa9.86□□□□□ -0.83
SDCBP-203ENST00000424270 PTPN23Q9H3S7 1636 aa9.86□□□□□ -0.83
SDCBP-203ENST00000424270 CAMKK2Q96RR4 588 aa9.86□□□□□ -0.83
SDCBP-203ENST00000424270 PARD3Q8TEW0 1356 aa9.86□□□□□ -0.83
SDCBP-203ENST00000424270 DISP2A7MBM2 1401 aa9.85□□□□□ -0.83
SDCBP-203ENST00000424270 SPATA31A3Q5VYP0 1347 aa9.84□□□□□ -0.83
SDCBP-203ENST00000424270 FAM196AQ6ZSG2 479 aa9.84□□□□□ -0.83
SDCBP-203ENST00000424270 KRT28Q7Z3Y7 464 aa9.84□□□□□ -0.83
SDCBP-203ENST00000424270 BTG4Q9NY30 223 aa9.84□□□□□ -0.83
SDCBP-203ENST00000424270 NRXN3Q9Y4C0 1643 aa9.84□□□□□ -0.83
SDCBP-203ENST00000424270 ROBO2Q9HCK4 1378 aa9.84□□□□□ -0.83
SDCBP-203ENST00000424270 ANKRD50Q9ULJ7 1429 aa9.83□□□□□ -0.84
SDCBP-203ENST00000424270 PSME1Q06323 249 aa9.83□□□□□ -0.84
SDCBP-203ENST00000424270 KANK4Q5T7N3 995 aaPredicted RBP9.83□□□□□ -0.84
SDCBP-203ENST00000424270 PLCH1Q4KWH8 1693 aa9.83□□□□□ -0.84
SDCBP-203ENST00000424270 CCDC144AA2RUR9 1427 aa9.82□□□□□ -0.84
SDCBP-203ENST00000424270 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
SDCBP-203ENST00000424270 CAPN15O75808 1086 aa9.81□□□□□ -0.84
SDCBP-203ENST00000424270 PDE3BQ13370 1112 aa9.81□□□□□ -0.84
SDCBP-203ENST00000424270 TNS1Q9HBL0 1735 aaKnown RBP9.81□□□□□ -0.84
SDCBP-203ENST00000424270 HFM1A2PYH4 1435 aa9.81□□□□□ -0.84
SDCBP-203ENST00000424270 NWD2Q9ULI1 1742 aa9.8□□□□□ -0.84
SDCBP-203ENST00000424270 ZBTB7AO95365 584 aa9.8□□□□□ -0.84
SDCBP-203ENST00000424270 APLP2Q06481 763 aa9.8□□□□□ -0.84
SDCBP-203ENST00000424270 FAM50AQ14320 339 aaKnown RBP9.8□□□□□ -0.84
SDCBP-203ENST00000424270 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
SDCBP-203ENST00000424270 IQGAP3Q86VI3 1631 aa9.79□□□□□ -0.84
SDCBP-203ENST00000424270 GPR162Q16538 588 aa9.79□□□□□ -0.84
SDCBP-203ENST00000424270 ATF5Q9Y2D1 282 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-203ENST00000424270 E9PCH4 1651 aa9.79□□□□□ -0.84
SDCBP-203ENST00000424270 TNS3Q68CZ2 1445 aa9.79□□□□□ -0.84
SDCBP-203ENST00000424270 FHDC1Q9C0D6 1143 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-203ENST00000424270 USP35Q9P2H5 1018 aa9.78□□□□□ -0.84
SDCBP-203ENST00000424270 NRKQ7Z2Y5 1582 aa9.78□□□□□ -0.84
SDCBP-203ENST00000424270 ARHGEF10O15013 1369 aa9.77□□□□□ -0.84
SDCBP-203ENST00000424270 CDC42BPGQ6DT37 1551 aa9.77□□□□□ -0.85
SDCBP-203ENST00000424270 NAIPQ13075 1403 aa9.77□□□□□ -0.85
SDCBP-203ENST00000424270 KLHL34Q8N239 644 aa9.77□□□□□ -0.85
SDCBP-203ENST00000424270 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-203ENST00000424270 STRN4Q9NRL3 753 aa9.77□□□□□ -0.85
SDCBP-203ENST00000424270 STK26Q9P289 416 aa9.77□□□□□ -0.85
SDCBP-203ENST00000424270 SPATA31A5Q5VU36 1347 aa9.77□□□□□ -0.85
SDCBP-203ENST00000424270 SPATA31A7Q8IWB4 1347 aa9.77□□□□□ -0.85
SDCBP-203ENST00000424270 VGFO15240 615 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-203ENST00000424270 NPM3O75607 178 aaKnown RBP9.76□□□□□ -0.85
SDCBP-203ENST00000424270 SYT17Q9BSW7 474 aa9.76□□□□□ -0.85
SDCBP-203ENST00000424270 NUP188Q5SRE5 1749 aa9.76□□□□□ -0.85
SDCBP-203ENST00000424270 NUP155O75694 1391 aa9.75□□□□□ -0.85
SDCBP-203ENST00000424270 PRDM11Q9NQV5 511 aa9.75□□□□□ -0.85
SDCBP-203ENST00000424270 PHF8Q9UPP1 1060 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms