RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 ROBO1Q9Y6N7 1651 aa14.17□□□□□ -0.14
ECHDC3-203ENST00000422887 PLEKHH1Q9ULM0 1364 aa14.17□□□□□ -0.14
ECHDC3-203ENST00000422887 NBPF1Q3BBV0 1214 aa14.16□□□□□ -0.14
ECHDC3-203ENST00000422887 CERKQ8TCT0 537 aa14.16□□□□□ -0.14
ECHDC3-203ENST00000422887 CARD11Q9BXL7 1154 aa14.16□□□□□ -0.14
ECHDC3-203ENST00000422887 STK26Q9P289 416 aa14.14□□□□□ -0.15
ECHDC3-203ENST00000422887 TULP4Q9NRJ4 1543 aa14.14□□□□□ -0.15
ECHDC3-203ENST00000422887 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
ECHDC3-203ENST00000422887 MST1RQ04912 1400 aa14.13□□□□□ -0.15
ECHDC3-203ENST00000422887 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
ECHDC3-203ENST00000422887 TRAK1Q9UPV9 953 aa14.12□□□□□ -0.15
ECHDC3-203ENST00000422887 SBNO2Q9Y2G9 1366 aa14.11□□□□□ -0.15
ECHDC3-203ENST00000422887 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
ECHDC3-203ENST00000422887 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
ECHDC3-203ENST00000422887 AHDC1Q5TGY3 1603 aaPredicted RBP14.11□□□□□ -0.15
ECHDC3-203ENST00000422887 MSH6P52701 1360 aa14.1□□□□□ -0.15
ECHDC3-203ENST00000422887 USP47Q96K76 1375 aa14.1□□□□□ -0.15
ECHDC3-203ENST00000422887 POGKQ9P215 609 aa14.1□□□□□ -0.15
ECHDC3-203ENST00000422887 MYOM1P52179 1685 aa14.1□□□□□ -0.15
ECHDC3-203ENST00000422887 CENPJQ9HC77 1338 aaPredicted RBP14.1□□□□□ -0.15
ECHDC3-203ENST00000422887 COL16A1Q07092 1604 aaPredicted RBP14.09□□□□□ -0.15
ECHDC3-203ENST00000422887 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
ECHDC3-203ENST00000422887 TRPM3Q9HCF6 1732 aaPredicted RBP14.09□□□□□ -0.15
ECHDC3-203ENST00000422887 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
ECHDC3-203ENST00000422887 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
ECHDC3-203ENST00000422887 ATP7BP35670 1465 aa14.07□□□□□ -0.16
ECHDC3-203ENST00000422887 RBM33Q96EV2 1170 aaKnown RBP14.07□□□□□ -0.16
ECHDC3-203ENST00000422887 C19orf44Q9H6X5 657 aa14.07□□□□□ -0.16
ECHDC3-203ENST00000422887 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
ECHDC3-203ENST00000422887 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
ECHDC3-203ENST00000422887 MON2Q7Z3U7 1717 aa14.05□□□□□ -0.16
ECHDC3-203ENST00000422887 EIF4G2P78344 907 aaKnown RBP eCLIP14.05□□□□□ -0.16
ECHDC3-203ENST00000422887 CADPS2Q86UW7 1296 aa14.05□□□□□ -0.16
ECHDC3-203ENST00000422887 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
ECHDC3-203ENST00000422887 NRKQ7Z2Y5 1582 aa14.05□□□□□ -0.16
ECHDC3-203ENST00000422887 ABCA3Q99758 1704 aa14.04□□□□□ -0.16
ECHDC3-203ENST00000422887 SHPRHQ149N8 1683 aa14.04□□□□□ -0.16
ECHDC3-203ENST00000422887 ALS2Q96Q42 1657 aa14.04□□□□□ -0.16
ECHDC3-203ENST00000422887 MARF1Q9Y4F3 1742 aaKnown RBP14.04□□□□□ -0.16
ECHDC3-203ENST00000422887 ATF3P18847 181 aa14.03□□□□□ -0.16
ECHDC3-203ENST00000422887 ANKARQ7Z5J8 1434 aa14.03□□□□□ -0.16
ECHDC3-203ENST00000422887 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.17
ECHDC3-203ENST00000422887 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
ECHDC3-203ENST00000422887 COL22A1Q8NFW1 1626 aaPredicted RBP14.01□□□□□ -0.17
ECHDC3-203ENST00000422887 EVC2Q86UK5 1308 aa14.01□□□□□ -0.17
ECHDC3-203ENST00000422887 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
ECHDC3-203ENST00000422887 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
ECHDC3-203ENST00000422887 TOM1O60784 492 aa14□□□□□ -0.17
ECHDC3-203ENST00000422887 PXDNQ92626 1479 aa13.99□□□□□ -0.17
ECHDC3-203ENST00000422887 WASLO00401 505 aaPredicted RBP13.99□□□□□ -0.17
ECHDC3-203ENST00000422887 TESK2Q96S53 571 aa13.99□□□□□ -0.17
ECHDC3-203ENST00000422887 PRR36Q9H6K5 1346 aa13.98□□□□□ -0.17
ECHDC3-203ENST00000422887 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
ECHDC3-203ENST00000422887 PUS7Q96PZ0 661 aaKnown RBP13.98□□□□□ -0.17
ECHDC3-203ENST00000422887 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
ECHDC3-203ENST00000422887 ATAD2Q6PL18 1390 aa13.97□□□□□ -0.17
ECHDC3-203ENST00000422887 HSPA5P11021 654 aaKnown RBP13.97□□□□□ -0.17
ECHDC3-203ENST00000422887 TMF1P82094 1093 aa13.97□□□□□ -0.17
ECHDC3-203ENST00000422887 UBAP1LF5GYI3 381 aa13.96□□□□□ -0.17
ECHDC3-203ENST00000422887 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
ECHDC3-203ENST00000422887 CDK19Q9BWU1 502 aa13.95□□□□□ -0.18
ECHDC3-203ENST00000422887 SLAIN2Q9P270 581 aa13.95□□□□□ -0.18
ECHDC3-203ENST00000422887 NINLQ9Y2I6 1382 aa13.95□□□□□ -0.18
ECHDC3-203ENST00000422887 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
ECHDC3-203ENST00000422887 BRINP3Q76B58 766 aa13.94□□□□□ -0.18
ECHDC3-203ENST00000422887 PIK3C2AO00443 1686 aa13.94□□□□□ -0.18
ECHDC3-203ENST00000422887 MED1Q15648 1581 aaPredicted RBP13.93□□□□□ -0.18
ECHDC3-203ENST00000422887 DISP3Q9P2K9 1392 aa13.93□□□□□ -0.18
ECHDC3-203ENST00000422887 PHRF1Q9P1Y6 1649 aaKnown RBP13.93□□□□□ -0.18
ECHDC3-203ENST00000422887 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
ECHDC3-203ENST00000422887 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
ECHDC3-203ENST00000422887 KIF20BQ96Q89 1820 aa13.92□□□□□ -0.18
ECHDC3-203ENST00000422887 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
ECHDC3-203ENST00000422887 PPIP5K1Q6PFW1 1433 aa13.9□□□□□ -0.18
ECHDC3-203ENST00000422887 ANKRD26Q9UPS8 1709 aa13.9□□□□□ -0.18
ECHDC3-203ENST00000422887 CABP2Q9NPB3 220 aa13.9□□□□□ -0.18
ECHDC3-203ENST00000422887 SSH2Q76I76 1423 aa13.9□□□□□ -0.19
ECHDC3-203ENST00000422887 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
ECHDC3-203ENST00000422887 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
ECHDC3-203ENST00000422887 SOS2Q07890 1332 aaPredicted RBP13.89□□□□□ -0.19
ECHDC3-203ENST00000422887 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
ECHDC3-203ENST00000422887 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
ECHDC3-203ENST00000422887 CPSF1Q10570 1443 aaKnown RBP13.88□□□□□ -0.19
ECHDC3-203ENST00000422887 NPHP3Q7Z494 1330 aa13.88□□□□□ -0.19
ECHDC3-203ENST00000422887 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
ECHDC3-203ENST00000422887 BRD4O60885 1362 aaPredicted RBP13.86□□□□□ -0.19
ECHDC3-203ENST00000422887 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
ECHDC3-203ENST00000422887 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
ECHDC3-203ENST00000422887 HSPA1LP34931 641 aa13.85□□□□□ -0.19
ECHDC3-203ENST00000422887 CCDC7Q96M83 1385 aa13.84□□□□□ -0.19
ECHDC3-203ENST00000422887 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
ECHDC3-203ENST00000422887 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
ECHDC3-203ENST00000422887 ANKRD36BQ8N2N9 1353 aa13.83□□□□□ -0.19
ECHDC3-203ENST00000422887 LRP6O75581 1613 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 USP6P35125 1406 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms