RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 ATAD2Q6PL18 1390 aa11.49□□□□□ -0.57
AP001042.1-201ENST00000416842 PIK3R4Q99570 1358 aa11.49□□□□□ -0.57
AP001042.1-201ENST00000416842 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
AP001042.1-201ENST00000416842 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
AP001042.1-201ENST00000416842 DCCP43146 1447 aa11.48□□□□□ -0.57
AP001042.1-201ENST00000416842 MST1RQ04912 1400 aa11.48□□□□□ -0.57
AP001042.1-201ENST00000416842 PTPRUQ92729 1446 aa11.48□□□□□ -0.57
AP001042.1-201ENST00000416842 CLTCL1P53675 1640 aa11.48□□□□□ -0.57
AP001042.1-201ENST00000416842 PRAG1Q86YV5 1406 aa11.47□□□□□ -0.57
AP001042.1-201ENST00000416842 RPGRIP1LQ68CZ1 1315 aa11.47□□□□□ -0.57
AP001042.1-201ENST00000416842 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
AP001042.1-201ENST00000416842 RGL3Q3MIN7 710 aa11.47□□□□□ -0.57
AP001042.1-201ENST00000416842 RNF216Q9NWF9 866 aaPredicted RBP11.47□□□□□ -0.57
AP001042.1-201ENST00000416842 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
AP001042.1-201ENST00000416842 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
AP001042.1-201ENST00000416842 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.57
AP001042.1-201ENST00000416842 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
AP001042.1-201ENST00000416842 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
AP001042.1-201ENST00000416842 LRRC59Q96AG4 307 aaKnown RBP11.45□□□□□ -0.58
AP001042.1-201ENST00000416842 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
AP001042.1-201ENST00000416842 NALCNQ8IZF0 1738 aa11.45□□□□□ -0.58
AP001042.1-201ENST00000416842 DDX17Q92841 729 aaKnown RBP11.44□□□□□ -0.58
AP001042.1-201ENST00000416842 NGLY1Q96IV0 654 aa11.44□□□□□ -0.58
AP001042.1-201ENST00000416842 LAMC1P11047 1609 aa11.44□□□□□ -0.58
AP001042.1-201ENST00000416842 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
AP001042.1-201ENST00000416842 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
AP001042.1-201ENST00000416842 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
AP001042.1-201ENST00000416842 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
AP001042.1-201ENST00000416842 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
AP001042.1-201ENST00000416842 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
AP001042.1-201ENST00000416842 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
AP001042.1-201ENST00000416842 MARF1Q9Y4F3 1742 aaKnown RBP11.42□□□□□ -0.58
AP001042.1-201ENST00000416842 MYOM2P54296 1465 aa11.41□□□□□ -0.58
AP001042.1-201ENST00000416842 NBPF1Q3BBV0 1214 aa11.41□□□□□ -0.58
AP001042.1-201ENST00000416842 ATRNO75882 1429 aa11.41□□□□□ -0.58
AP001042.1-201ENST00000416842 LRP5O75197 1615 aa11.4□□□□□ -0.58
AP001042.1-201ENST00000416842 COL22A1Q8NFW1 1626 aaPredicted RBP11.4□□□□□ -0.58
AP001042.1-201ENST00000416842 USP21Q9UK80 565 aa11.4□□□□□ -0.58
AP001042.1-201ENST00000416842 ADGRL3Q9HAR2 1447 aa11.4□□□□□ -0.58
AP001042.1-201ENST00000416842 ADGRF5Q8IZF2 1346 aa11.39□□□□□ -0.59
AP001042.1-201ENST00000416842 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
AP001042.1-201ENST00000416842 EP400Q96L91 3159 aa11.38□□□□□ -0.59
AP001042.1-201ENST00000416842 PTCH1Q13635 1447 aa11.38□□□□□ -0.59
AP001042.1-201ENST00000416842 BRWD3Q6RI45 1802 aa11.38□□□□□ -0.59
AP001042.1-201ENST00000416842 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
AP001042.1-201ENST00000416842 C14orf93Q9H972 538 aaKnown RBP11.38□□□□□ -0.59
AP001042.1-201ENST00000416842 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
AP001042.1-201ENST00000416842 VGFO15240 615 aaPredicted RBP11.37□□□□□ -0.59
AP001042.1-201ENST00000416842 CCDC125Q86Z20 511 aa11.37□□□□□ -0.59
AP001042.1-201ENST00000416842 FNBP4Q8N3X1 1017 aaPredicted RBP11.37□□□□□ -0.59
AP001042.1-201ENST00000416842 C1orf167Q5SNV9 1468 aa11.37□□□□□ -0.59
AP001042.1-201ENST00000416842 TRPM1Q7Z4N2 1603 aa11.36□□□□□ -0.59
AP001042.1-201ENST00000416842 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.36□□□□□ -0.59
AP001042.1-201ENST00000416842 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
AP001042.1-201ENST00000416842 KIF1BO60333 1816 aa11.36□□□□□ -0.59
AP001042.1-201ENST00000416842 METP08581 1390 aa11.36□□□□□ -0.59
AP001042.1-201ENST00000416842 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
AP001042.1-201ENST00000416842 HIRIP3Q9BW71 556 aaPredicted RBP11.35□□□□□ -0.59
AP001042.1-201ENST00000416842 USP47Q96K76 1375 aa11.35□□□□□ -0.59
AP001042.1-201ENST00000416842 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
AP001042.1-201ENST00000416842 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
AP001042.1-201ENST00000416842 SOS2Q07890 1332 aaPredicted RBP11.35□□□□□ -0.59
AP001042.1-201ENST00000416842 BCL9LQ86UU0 1499 aa11.34□□□□□ -0.59
AP001042.1-201ENST00000416842 ROCK2O75116 1388 aaKnown RBP11.34□□□□□ -0.59
AP001042.1-201ENST00000416842 TESK2Q96S53 571 aa11.34□□□□□ -0.59
AP001042.1-201ENST00000416842 NEXMIFQ5QGS0 1516 aa11.34□□□□□ -0.59
AP001042.1-201ENST00000416842 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
AP001042.1-201ENST00000416842 KIAA1210Q9ULL0 1709 aa11.33□□□□□ -0.6
AP001042.1-201ENST00000416842 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
AP001042.1-201ENST00000416842 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
AP001042.1-201ENST00000416842 GLI3P10071 1580 aa11.33□□□□□ -0.6
AP001042.1-201ENST00000416842 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
AP001042.1-201ENST00000416842 ORAI2Q96SN7 254 aa11.32□□□□□ -0.6
AP001042.1-201ENST00000416842 PPLO60437 1756 aa11.31□□□□□ -0.6
AP001042.1-201ENST00000416842 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
AP001042.1-201ENST00000416842 DEFB132Q7Z7B7 95 aa11.3□□□□□ -0.6
AP001042.1-201ENST00000416842 GJD4Q96KN9 370 aaPredicted RBP11.3□□□□□ -0.6
AP001042.1-201ENST00000416842 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
AP001042.1-201ENST00000416842 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
AP001042.1-201ENST00000416842 PXDNQ92626 1479 aa11.28□□□□□ -0.6
AP001042.1-201ENST00000416842 DDX10Q13206 875 aaKnown RBP11.28□□□□□ -0.6
AP001042.1-201ENST00000416842 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
AP001042.1-201ENST00000416842 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
AP001042.1-201ENST00000416842 SLIT2O94813 1529 aa11.25□□□□□ -0.61
AP001042.1-201ENST00000416842 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
AP001042.1-201ENST00000416842 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
AP001042.1-201ENST00000416842 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
AP001042.1-201ENST00000416842 PLCH1Q4KWH8 1693 aa11.24□□□□□ -0.61
AP001042.1-201ENST00000416842 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
AP001042.1-201ENST00000416842 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
AP001042.1-201ENST00000416842 MIER1Q8N108 512 aa11.24□□□□□ -0.61
AP001042.1-201ENST00000416842 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
AP001042.1-201ENST00000416842 XPCQ01831 940 aaPredicted RBP11.23□□□□□ -0.61
AP001042.1-201ENST00000416842 SF3B2Q13435 895 aaKnown RBP11.23□□□□□ -0.61
AP001042.1-201ENST00000416842 TMEM132EQ6IEE7 984 aa11.23□□□□□ -0.61
AP001042.1-201ENST00000416842 PUS7Q96PZ0 661 aaKnown RBP11.23□□□□□ -0.61
AP001042.1-201ENST00000416842 NPHP3Q7Z494 1330 aa11.23□□□□□ -0.61
AP001042.1-201ENST00000416842 NWD2Q9ULI1 1742 aa11.23□□□□□ -0.61
AP001042.1-201ENST00000416842 ABCC11Q96J66 1382 aa11.22□□□□□ -0.61
AP001042.1-201ENST00000416842 RGPD1P0DJD0 1748 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms