RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 A0A0U1RQG5 324 aaPredicted RBP13□□□□□ -0.33
COL12A1-203ENST00000416123 LRRFIP1Q32MZ4 808 aaKnown RBP13□□□□□ -0.33
COL12A1-203ENST00000416123 RUFY2Q8WXA3 655 aa13□□□□□ -0.33
COL12A1-203ENST00000416123 PROSER2Q86WR7 435 aaPredicted RBP13□□□□□ -0.33
COL12A1-203ENST00000416123 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
COL12A1-203ENST00000416123 TRIM29Q14134 588 aa12.99□□□□□ -0.33
COL12A1-203ENST00000416123 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
COL12A1-203ENST00000416123 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
COL12A1-203ENST00000416123 ROCK1Q13464 1354 aa12.98□□□□□ -0.33
COL12A1-203ENST00000416123 GPRASP1Q5JY77 1395 aa12.98□□□□□ -0.33
COL12A1-203ENST00000416123 RAPGEF3O95398 923 aa12.98□□□□□ -0.33
COL12A1-203ENST00000416123 DDX49Q9Y6V7 483 aaKnown RBP12.98□□□□□ -0.33
COL12A1-203ENST00000416123 GNAI1P63096 354 aa12.98□□□□□ -0.33
COL12A1-203ENST00000416123 API5Q9BZZ5 524 aaKnown RBP12.98□□□□□ -0.33
COL12A1-203ENST00000416123 TRDNQ13061 729 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 ADAMTS8Q9UP79 889 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 SCAPERQ9BY12 1400 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
COL12A1-203ENST00000416123 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 CPLX1O14810 134 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
COL12A1-203ENST00000416123 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 C9orf84Q5VXU9 1444 aa12.97□□□□□ -0.33
COL12A1-203ENST00000416123 NCAPD3P42695 1498 aa12.96□□□□□ -0.33
COL12A1-203ENST00000416123 ARAP1Q96P48 1450 aa12.96□□□□□ -0.33
COL12A1-203ENST00000416123 ERICH2A1L162 156 aa12.96□□□□□ -0.33
COL12A1-203ENST00000416123 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.33
COL12A1-203ENST00000416123 CWC22Q9HCG8 908 aaKnown RBP12.96□□□□□ -0.33
COL12A1-203ENST00000416123 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.34
COL12A1-203ENST00000416123 TOP2BQ02880 1626 aa12.96□□□□□ -0.34
COL12A1-203ENST00000416123 CNTLNQ9NXG0 1405 aa12.95□□□□□ -0.34
COL12A1-203ENST00000416123 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
COL12A1-203ENST00000416123 REC8O95072 547 aa12.95□□□□□ -0.34
COL12A1-203ENST00000416123 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
COL12A1-203ENST00000416123 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
COL12A1-203ENST00000416123 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
COL12A1-203ENST00000416123 PCMTD1Q96MG8 357 aaPredicted RBP12.95□□□□□ -0.34
COL12A1-203ENST00000416123 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
COL12A1-203ENST00000416123 KIF6Q6ZMV9 814 aa12.94□□□□□ -0.34
COL12A1-203ENST00000416123 TPM3P06753 285 aa12.94□□□□□ -0.34
COL12A1-203ENST00000416123 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
COL12A1-203ENST00000416123 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
COL12A1-203ENST00000416123 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
COL12A1-203ENST00000416123 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
COL12A1-203ENST00000416123 BECN2A8MW95 431 aa12.93□□□□□ -0.34
COL12A1-203ENST00000416123 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
COL12A1-203ENST00000416123 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
COL12A1-203ENST00000416123 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
COL12A1-203ENST00000416123 STK11IPQ8N1F8 1099 aa12.93□□□□□ -0.34
COL12A1-203ENST00000416123 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
COL12A1-203ENST00000416123 VPS37CA5D8V6 355 aaPredicted RBP12.93□□□□□ -0.34
COL12A1-203ENST00000416123 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
COL12A1-203ENST00000416123 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
COL12A1-203ENST00000416123 MYL6BP14649 208 aa12.92□□□□□ -0.34
COL12A1-203ENST00000416123 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
COL12A1-203ENST00000416123 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
COL12A1-203ENST00000416123 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
COL12A1-203ENST00000416123 DNAJC2Q99543 621 aaKnown RBP12.92□□□□□ -0.34
COL12A1-203ENST00000416123 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
COL12A1-203ENST00000416123 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
COL12A1-203ENST00000416123 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
COL12A1-203ENST00000416123 TPM2P07951 284 aa12.91□□□□□ -0.34
COL12A1-203ENST00000416123 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
COL12A1-203ENST00000416123 BICD2Q8TD16 824 aa12.91□□□□□ -0.34
COL12A1-203ENST00000416123 ERC2O15083 957 aa12.91□□□□□ -0.34
COL12A1-203ENST00000416123 CCDC30Q5VVM6 783 aa12.9□□□□□ -0.34
COL12A1-203ENST00000416123 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
COL12A1-203ENST00000416123 ERBINQ96RT1 1412 aa12.9□□□□□ -0.34
COL12A1-203ENST00000416123 RRS1Q15050 365 aaKnown RBP12.9□□□□□ -0.34
COL12A1-203ENST00000416123 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
COL12A1-203ENST00000416123 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
COL12A1-203ENST00000416123 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-203ENST00000416123 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
COL12A1-203ENST00000416123 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-203ENST00000416123 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
COL12A1-203ENST00000416123 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
COL12A1-203ENST00000416123 CABP4P57796 275 aa12.89□□□□□ -0.35
COL12A1-203ENST00000416123 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
COL12A1-203ENST00000416123 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
COL12A1-203ENST00000416123 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
COL12A1-203ENST00000416123 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
COL12A1-203ENST00000416123 GOLGA6L1Q8N7Z2 621 aa12.89□□□□□ -0.35
COL12A1-203ENST00000416123 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
COL12A1-203ENST00000416123 EFCAB5A4FU69 1503 aa12.89□□□□□ -0.35
COL12A1-203ENST00000416123 SIL1Q9H173 461 aa12.89□□□□□ -0.35
COL12A1-203ENST00000416123 THEMISQ8N1K5 641 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-203ENST00000416123 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-203ENST00000416123 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
COL12A1-203ENST00000416123 SURF6O75683 361 aaKnown RBP12.88□□□□□ -0.35
COL12A1-203ENST00000416123 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-203ENST00000416123 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
COL12A1-203ENST00000416123 CCDC43Q96MW1 224 aaKnown RBP12.88□□□□□ -0.35
COL12A1-203ENST00000416123 TIAM1Q13009 1591 aa12.88□□□□□ -0.35
COL12A1-203ENST00000416123 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
COL12A1-203ENST00000416123 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
COL12A1-203ENST00000416123 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
COL12A1-203ENST00000416123 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms