RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
PRAMEF9-201ENST00000415919 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
PRAMEF9-201ENST00000415919 TMC1Q8TDI8 760 aa17.22■□□□□ 0.35
PRAMEF9-201ENST00000415919 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
PRAMEF9-201ENST00000415919 CABP2Q9NPB3 220 aa17.22■□□□□ 0.35
PRAMEF9-201ENST00000415919 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.35
PRAMEF9-201ENST00000415919 CPS1P31327 1500 aa17.21■□□□□ 0.35
PRAMEF9-201ENST00000415919 ROBO2Q9HCK4 1378 aa17.2■□□□□ 0.34
PRAMEF9-201ENST00000415919 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
PRAMEF9-201ENST00000415919 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
PRAMEF9-201ENST00000415919 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
PRAMEF9-201ENST00000415919 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
PRAMEF9-201ENST00000415919 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
PRAMEF9-201ENST00000415919 HSPA2P54652 639 aa17.18■□□□□ 0.34
PRAMEF9-201ENST00000415919 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
PRAMEF9-201ENST00000415919 MYOM1P52179 1685 aa17.17■□□□□ 0.34
PRAMEF9-201ENST00000415919 SLC12A5Q9H2X9 1139 aa17.16■□□□□ 0.34
PRAMEF9-201ENST00000415919 ATAD2Q6PL18 1390 aa17.16■□□□□ 0.34
PRAMEF9-201ENST00000415919 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
PRAMEF9-201ENST00000415919 KCNA6P17658 529 aa17.15■□□□□ 0.34
PRAMEF9-201ENST00000415919 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
PRAMEF9-201ENST00000415919 KTN1Q86UP2 1357 aaKnown RBP17.13■□□□□ 0.33
PRAMEF9-201ENST00000415919 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
PRAMEF9-201ENST00000415919 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
PRAMEF9-201ENST00000415919 LMTK3Q96Q04 1460 aa17.12■□□□□ 0.33
PRAMEF9-201ENST00000415919 RALBP1Q15311 655 aa17.12■□□□□ 0.33
PRAMEF9-201ENST00000415919 NINLQ9Y2I6 1382 aa17.11■□□□□ 0.33
PRAMEF9-201ENST00000415919 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
PRAMEF9-201ENST00000415919 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
PRAMEF9-201ENST00000415919 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
PRAMEF9-201ENST00000415919 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
PRAMEF9-201ENST00000415919 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
PRAMEF9-201ENST00000415919 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.33
PRAMEF9-201ENST00000415919 TERF2IPQ9NYB0 399 aa17.08■□□□□ 0.33
PRAMEF9-201ENST00000415919 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.33
PRAMEF9-201ENST00000415919 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
PRAMEF9-201ENST00000415919 HDGFL2Q7Z4V5 671 aaPredicted RBP17.07■□□□□ 0.32
PRAMEF9-201ENST00000415919 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
PRAMEF9-201ENST00000415919 ADGRB2O60241 1585 aa17.06■□□□□ 0.32
PRAMEF9-201ENST00000415919 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
PRAMEF9-201ENST00000415919 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
PRAMEF9-201ENST00000415919 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
PRAMEF9-201ENST00000415919 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
PRAMEF9-201ENST00000415919 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
PRAMEF9-201ENST00000415919 A0A1W2PP64 1363 aa17.04■□□□□ 0.32
PRAMEF9-201ENST00000415919 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
PRAMEF9-201ENST00000415919 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
PRAMEF9-201ENST00000415919 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
PRAMEF9-201ENST00000415919 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
PRAMEF9-201ENST00000415919 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
PRAMEF9-201ENST00000415919 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
PRAMEF9-201ENST00000415919 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
PRAMEF9-201ENST00000415919 CGNL1Q0VF96 1302 aa17.03■□□□□ 0.32
PRAMEF9-201ENST00000415919 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
PRAMEF9-201ENST00000415919 ATP7BP35670 1465 aa17.01■□□□□ 0.31
PRAMEF9-201ENST00000415919 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
PRAMEF9-201ENST00000415919 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
PRAMEF9-201ENST00000415919 NLRP13Q86W25 1043 aa17■□□□□ 0.31
PRAMEF9-201ENST00000415919 STRCQ7RTU9 1775 aa16.99■□□□□ 0.31
PRAMEF9-201ENST00000415919 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
PRAMEF9-201ENST00000415919 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
PRAMEF9-201ENST00000415919 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
PRAMEF9-201ENST00000415919 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
PRAMEF9-201ENST00000415919 USP32Q8NFA0 1604 aa16.97■□□□□ 0.31
PRAMEF9-201ENST00000415919 FAM9BQ8IZU0 186 aa16.97■□□□□ 0.31
PRAMEF9-201ENST00000415919 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
PRAMEF9-201ENST00000415919 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.31
PRAMEF9-201ENST00000415919 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
PRAMEF9-201ENST00000415919 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
PRAMEF9-201ENST00000415919 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
PRAMEF9-201ENST00000415919 NSD2O96028 1365 aa16.96■□□□□ 0.3
PRAMEF9-201ENST00000415919 CDC42BPGQ6DT37 1551 aa16.95■□□□□ 0.3
PRAMEF9-201ENST00000415919 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
PRAMEF9-201ENST00000415919 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
PRAMEF9-201ENST00000415919 ACEP12821 1306 aa16.95■□□□□ 0.3
PRAMEF9-201ENST00000415919 PMFBP1Q8TBY8 1022 aa16.95■□□□□ 0.3
PRAMEF9-201ENST00000415919 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
PRAMEF9-201ENST00000415919 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
PRAMEF9-201ENST00000415919 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
PRAMEF9-201ENST00000415919 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
PRAMEF9-201ENST00000415919 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
PRAMEF9-201ENST00000415919 TOPAZ1Q8N9V7 1692 aa16.93■□□□□ 0.3
PRAMEF9-201ENST00000415919 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
PRAMEF9-201ENST00000415919 FYB1O15117 783 aa16.93■□□□□ 0.3
PRAMEF9-201ENST00000415919 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
PRAMEF9-201ENST00000415919 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
PRAMEF9-201ENST00000415919 ITSN1Q15811 1721 aa16.92■□□□□ 0.3
PRAMEF9-201ENST00000415919 TMEM94Q12767 1356 aa16.92■□□□□ 0.3
PRAMEF9-201ENST00000415919 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
PRAMEF9-201ENST00000415919 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
PRAMEF9-201ENST00000415919 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
PRAMEF9-201ENST00000415919 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
PRAMEF9-201ENST00000415919 AKAP12Q02952 1782 aa16.89■□□□□ 0.29
PRAMEF9-201ENST00000415919 ATF3P18847 181 aa16.88■□□□□ 0.29
PRAMEF9-201ENST00000415919 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
PRAMEF9-201ENST00000415919 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
PRAMEF9-201ENST00000415919 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
PRAMEF9-201ENST00000415919 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
PRAMEF9-201ENST00000415919 NME9Q86XW9 330 aa16.88■□□□□ 0.29
PRAMEF9-201ENST00000415919 POLR3AO14802 1390 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms