RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 SHPRHQ149N8 1683 aa17.38■□□□□ 0.37
CSTF2-203ENST00000415585 E9PSI1 815 aa17.38■□□□□ 0.37
CSTF2-203ENST00000415585 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
CSTF2-203ENST00000415585 NSD3Q9BZ95 1437 aa17.37■□□□□ 0.37
CSTF2-203ENST00000415585 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
CSTF2-203ENST00000415585 ABCC3O15438 1527 aa17.36■□□□□ 0.37
CSTF2-203ENST00000415585 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
CSTF2-203ENST00000415585 CAMSAP1Q5T5Y3 1602 aa17.35■□□□□ 0.37
CSTF2-203ENST00000415585 USP32Q8NFA0 1604 aa17.34■□□□□ 0.37
CSTF2-203ENST00000415585 SIGLEC1Q9BZZ2 1709 aa17.34■□□□□ 0.37
CSTF2-203ENST00000415585 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
CSTF2-203ENST00000415585 BCAR3O75815 825 aa17.33■□□□□ 0.37
CSTF2-203ENST00000415585 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.37
CSTF2-203ENST00000415585 TMEM132EQ6IEE7 984 aa17.33■□□□□ 0.36
CSTF2-203ENST00000415585 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
CSTF2-203ENST00000415585 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
CSTF2-203ENST00000415585 PIK3C2BO00750 1634 aa17.31■□□□□ 0.36
CSTF2-203ENST00000415585 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
CSTF2-203ENST00000415585 ARHGEF28Q8N1W1 1705 aaKnown RBP17.31■□□□□ 0.36
CSTF2-203ENST00000415585 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
CSTF2-203ENST00000415585 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
CSTF2-203ENST00000415585 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
CSTF2-203ENST00000415585 NEXMIFQ5QGS0 1516 aa17.28■□□□□ 0.36
CSTF2-203ENST00000415585 FAM161AQ3B820 660 aa17.27■□□□□ 0.36
CSTF2-203ENST00000415585 TULP4Q9NRJ4 1543 aa17.27■□□□□ 0.36
CSTF2-203ENST00000415585 C8orf34Q49A92 452 aa17.27■□□□□ 0.35
CSTF2-203ENST00000415585 RUNDC1Q96C34 613 aa17.27■□□□□ 0.35
CSTF2-203ENST00000415585 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
CSTF2-203ENST00000415585 CGNL1Q0VF96 1302 aa17.26■□□□□ 0.35
CSTF2-203ENST00000415585 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
CSTF2-203ENST00000415585 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
CSTF2-203ENST00000415585 PUS7Q96PZ0 661 aaKnown RBP17.25■□□□□ 0.35
CSTF2-203ENST00000415585 MTHFSP49914 203 aa17.24■□□□□ 0.35
CSTF2-203ENST00000415585 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
CSTF2-203ENST00000415585 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
CSTF2-203ENST00000415585 VGFO15240 615 aaPredicted RBP17.24■□□□□ 0.35
CSTF2-203ENST00000415585 RGS3P49796 1198 aa17.24■□□□□ 0.35
CSTF2-203ENST00000415585 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
CSTF2-203ENST00000415585 ANKRD36BQ8N2N9 1353 aa17.24■□□□□ 0.35
CSTF2-203ENST00000415585 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
CSTF2-203ENST00000415585 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
CSTF2-203ENST00000415585 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
CSTF2-203ENST00000415585 VIRMAQ69YN4 1812 aaKnown RBP17.23■□□□□ 0.35
CSTF2-203ENST00000415585 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.35
CSTF2-203ENST00000415585 NSD2O96028 1365 aa17.21■□□□□ 0.35
CSTF2-203ENST00000415585 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
CSTF2-203ENST00000415585 IGHDP01880 384 aa17.21■□□□□ 0.35
CSTF2-203ENST00000415585 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
CSTF2-203ENST00000415585 CFAP53Q96M91 514 aa17.21■□□□□ 0.35
CSTF2-203ENST00000415585 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
CSTF2-203ENST00000415585 PANK1Q8TE04 598 aa17.2■□□□□ 0.34
CSTF2-203ENST00000415585 NEFMP07197 916 aa17.2■□□□□ 0.34
CSTF2-203ENST00000415585 WDR63Q8IWG1 891 aa17.2■□□□□ 0.34
CSTF2-203ENST00000415585 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
CSTF2-203ENST00000415585 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
CSTF2-203ENST00000415585 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
CSTF2-203ENST00000415585 COG6Q9Y2V7 657 aa17.19■□□□□ 0.34
CSTF2-203ENST00000415585 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
CSTF2-203ENST00000415585 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
CSTF2-203ENST00000415585 IDI1Q13907 227 aa17.18■□□□□ 0.34
CSTF2-203ENST00000415585 MLECQ14165 292 aa17.18■□□□□ 0.34
CSTF2-203ENST00000415585 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
CSTF2-203ENST00000415585 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
CSTF2-203ENST00000415585 ADGRB2O60241 1585 aa17.17■□□□□ 0.34
CSTF2-203ENST00000415585 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
CSTF2-203ENST00000415585 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
CSTF2-203ENST00000415585 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
CSTF2-203ENST00000415585 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
CSTF2-203ENST00000415585 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
CSTF2-203ENST00000415585 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
CSTF2-203ENST00000415585 AGLP35573 1532 aa17.15■□□□□ 0.34
CSTF2-203ENST00000415585 A0A1W2PP64 1363 aa17.14■□□□□ 0.34
CSTF2-203ENST00000415585 TMEM131LA2VDJ0 1609 aa17.14■□□□□ 0.34
CSTF2-203ENST00000415585 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
CSTF2-203ENST00000415585 SLC52A1Q9NWF4 448 aa17.14■□□□□ 0.33
CSTF2-203ENST00000415585 ARHGEF40Q8TER5 1519 aa17.14■□□□□ 0.33
CSTF2-203ENST00000415585 ABCC11Q96J66 1382 aa17.14■□□□□ 0.33
CSTF2-203ENST00000415585 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
CSTF2-203ENST00000415585 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
CSTF2-203ENST00000415585 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
CSTF2-203ENST00000415585 ANKRD26Q9UPS8 1709 aa17.13■□□□□ 0.33
CSTF2-203ENST00000415585 STK26Q9P289 416 aa17.12■□□□□ 0.33
CSTF2-203ENST00000415585 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
CSTF2-203ENST00000415585 PTPRMP28827 1452 aa17.12■□□□□ 0.33
CSTF2-203ENST00000415585 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
CSTF2-203ENST00000415585 RLBP1P12271 317 aa17.12■□□□□ 0.33
CSTF2-203ENST00000415585 AAMPQ13685 434 aa17.12■□□□□ 0.33
CSTF2-203ENST00000415585 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
CSTF2-203ENST00000415585 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
CSTF2-203ENST00000415585 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
CSTF2-203ENST00000415585 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
CSTF2-203ENST00000415585 SRPK2P78362 688 aaKnown RBP17.11■□□□□ 0.33
CSTF2-203ENST00000415585 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
CSTF2-203ENST00000415585 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
CSTF2-203ENST00000415585 COL3A1P02461 1466 aaPredicted RBP17.1■□□□□ 0.33
CSTF2-203ENST00000415585 PCDHB15Q9Y5E8 787 aa17.09■□□□□ 0.33
CSTF2-203ENST00000415585 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.33
CSTF2-203ENST00000415585 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.33
CSTF2-203ENST00000415585 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
CSTF2-203ENST00000415585 YTHDC2Q9H6S0 1430 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms