RNA–Protein interactions for RNA: ENST00000415193.5

LINC01047-201, Transcript of long intergenic non-protein coding RNA 1047, humanhuman

TSL 5 BASIC

Gene LINC01047, Length 778 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01047-201ENST00000415193 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
LINC01047-201ENST00000415193 NDUFV2P19404 249 aa11.94□□□□□ -0.5
LINC01047-201ENST00000415193 UCN2Q96RP3 112 aa11.94□□□□□ -0.5
LINC01047-201ENST00000415193 C6orf132Q5T0Z8 1188 aa11.93□□□□□ -0.5
LINC01047-201ENST00000415193 CABLES1Q8TDN4 633 aa11.93□□□□□ -0.5
LINC01047-201ENST00000415193 SOX11P35716 441 aa11.92□□□□□ -0.5
LINC01047-201ENST00000415193 RCCD1A6NED2 376 aa11.91□□□□□ -0.5
LINC01047-201ENST00000415193 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
LINC01047-201ENST00000415193 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
LINC01047-201ENST00000415193 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
LINC01047-201ENST00000415193 ERCC3P19447 782 aa11.9□□□□□ -0.5
LINC01047-201ENST00000415193 PRSS12P56730 875 aa11.9□□□□□ -0.5
LINC01047-201ENST00000415193 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
LINC01047-201ENST00000415193 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
LINC01047-201ENST00000415193 CCER1Q8TC90 406 aaPredicted RBP11.89□□□□□ -0.51
LINC01047-201ENST00000415193 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
LINC01047-201ENST00000415193 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
LINC01047-201ENST00000415193 FOSBP53539 338 aa11.87□□□□□ -0.51
LINC01047-201ENST00000415193 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 PRR7Q8TB68 274 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 ERBB3P21860 1342 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 HOXB3P14651 431 aaPredicted RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
LINC01047-201ENST00000415193 ELOAQ14241 798 aaKnown RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 MRRFQ96E11 262 aaKnown RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 EYA1Q99502 592 aa11.84□□□□□ -0.51
LINC01047-201ENST00000415193 KIAA1522Q9P206 1035 aaPredicted RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
LINC01047-201ENST00000415193 KDM4AO75164 1064 aa11.82□□□□□ -0.52
LINC01047-201ENST00000415193 SEMA3FQ13275 785 aa11.82□□□□□ -0.52
LINC01047-201ENST00000415193 DNAJC14Q6Y2X3 702 aaPredicted RBP11.82□□□□□ -0.52
LINC01047-201ENST00000415193 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
LINC01047-201ENST00000415193 ATP9BO43861 1147 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 DNAJB2P25686 324 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 USP46P62068 366 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
LINC01047-201ENST00000415193 KDM4FA0A1W2PPD8 638 aa11.8□□□□□ -0.52
LINC01047-201ENST00000415193 FDX1P10109 184 aa11.79□□□□□ -0.52
LINC01047-201ENST00000415193 TMEM164Q5U3C3 297 aa11.78□□□□□ -0.52
LINC01047-201ENST00000415193 LRRN4Q8WUT4 740 aa11.78□□□□□ -0.52
LINC01047-201ENST00000415193 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
LINC01047-201ENST00000415193 HOXA2O43364 376 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 KANK4Q5T7N3 995 aaPredicted RBP11.77□□□□□ -0.53
LINC01047-201ENST00000415193 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
LINC01047-201ENST00000415193 ZNF454Q8N9F8 522 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 TMEM134Q9H6X4 195 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 FAM198AQ9UFP1 575 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
LINC01047-201ENST00000415193 PHLDB3Q6NSJ2 640 aa11.76□□□□□ -0.53
LINC01047-201ENST00000415193 ARID4AP29374 1257 aaPredicted RBP11.75□□□□□ -0.53
LINC01047-201ENST00000415193 DOK7Q18PE1 504 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 STK32AQ8WU08 396 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01047-201ENST00000415193 MTMR2Q13614 643 aa11.74□□□□□ -0.53
LINC01047-201ENST00000415193 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
LINC01047-201ENST00000415193 TCF3P15923 654 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 EPS8L1Q8TE68 723 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 BCL2L13Q9BXK5 485 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 VARS2Q5ST30 1063 aaKnown RBP11.72□□□□□ -0.53
LINC01047-201ENST00000415193 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
LINC01047-201ENST00000415193 GCGRP47871 477 aa11.71□□□□□ -0.53
LINC01047-201ENST00000415193 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
LINC01047-201ENST00000415193 TSC1Q92574 1164 aa11.71□□□□□ -0.53
LINC01047-201ENST00000415193 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 SSFA2P28290 1259 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 NOM1Q5C9Z4 860 aaKnown RBP11.7□□□□□ -0.54
LINC01047-201ENST00000415193 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 NFATC2IPQ8NCF5 419 aa11.69□□□□□ -0.54
LINC01047-201ENST00000415193 CFAP99D6REC4 459 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 GUCA2AQ02747 115 aa11.67□□□□□ -0.54
LINC01047-201ENST00000415193 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
LINC01047-201ENST00000415193 MARSP56192 900 aaKnown RBP11.66□□□□□ -0.54
LINC01047-201ENST00000415193 C3orf80F5H4A9 247 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 NR6A1Q15406 480 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 DRC1Q96MC2 740 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 FAM196BA6NMK8 535 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 COL9A1P20849 921 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 SREK1Q8WXA9 508 aaKnown RBP11.64□□□□□ -0.55
LINC01047-201ENST00000415193 TATDN2Q93075 761 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 VAMP1P23763 118 aa11.63□□□□□ -0.55
LINC01047-201ENST00000415193 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
LINC01047-201ENST00000415193 NR1H3Q13133 447 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms