RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 RARSP54136 660 aaKnown RBP14.46□□□□□ -0.09
SCN4B-202ENST00000415030 MVPQ14764 893 aaKnown RBP14.46□□□□□ -0.1
SCN4B-202ENST00000415030 PBRM1Q86U86 1689 aa14.45□□□□□ -0.1
SCN4B-202ENST00000415030 ESPNB1AK53 854 aa14.45□□□□□ -0.1
SCN4B-202ENST00000415030 CALD1Q05682 793 aaKnown RBP14.45□□□□□ -0.1
SCN4B-202ENST00000415030 EID1Q9Y6B2 187 aa14.45□□□□□ -0.1
SCN4B-202ENST00000415030 KDM5DQ9BY66 1539 aa14.44□□□□□ -0.1
SCN4B-202ENST00000415030 NUTM2DQ5VT03 806 aaPredicted RBP14.44□□□□□ -0.1
SCN4B-202ENST00000415030 PTMAP06454 111 aaKnown RBP14.44□□□□□ -0.1
SCN4B-202ENST00000415030 A2MP01023 1474 aa14.44□□□□□ -0.1
SCN4B-202ENST00000415030 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
SCN4B-202ENST00000415030 ZMYM3Q14202 1370 aa14.44□□□□□ -0.1
SCN4B-202ENST00000415030 DDX49Q9Y6V7 483 aaKnown RBP14.43□□□□□ -0.1
SCN4B-202ENST00000415030 KIF16BQ96L93 1317 aa14.43□□□□□ -0.1
SCN4B-202ENST00000415030 XRCC6P12956 609 aaKnown RBP eCLIP14.43□□□□□ -0.1
SCN4B-202ENST00000415030 ZNF521Q96K83 1311 aa14.43□□□□□ -0.1
SCN4B-202ENST00000415030 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.42□□□□□ -0.1
SCN4B-202ENST00000415030 PKNOX2Q96KN3 472 aa14.42□□□□□ -0.1
SCN4B-202ENST00000415030 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
SCN4B-202ENST00000415030 SOX12O15370 315 aa14.41□□□□□ -0.1
SCN4B-202ENST00000415030 CCDC173Q0VFZ6 552 aa14.41□□□□□ -0.1
SCN4B-202ENST00000415030 SRPK2P78362 688 aaKnown RBP14.41□□□□□ -0.1
SCN4B-202ENST00000415030 TRMT2AQ8IZ69 625 aaKnown RBP14.4□□□□□ -0.1
SCN4B-202ENST00000415030 SEC24BO95487 1268 aa14.39□□□□□ -0.11
SCN4B-202ENST00000415030 ATP10BO94823 1461 aa14.39□□□□□ -0.11
SCN4B-202ENST00000415030 MTHFSP49914 203 aa14.39□□□□□ -0.11
SCN4B-202ENST00000415030 RRAGDQ9NQL2 400 aaPredicted RBP14.39□□□□□ -0.11
SCN4B-202ENST00000415030 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
SCN4B-202ENST00000415030 EIF4G3O43432 1585 aaKnown RBP14.39□□□□□ -0.11
SCN4B-202ENST00000415030 NASPP49321 788 aaPredicted RBP14.39□□□□□ -0.11
SCN4B-202ENST00000415030 TRAK1Q9UPV9 953 aa14.39□□□□□ -0.11
SCN4B-202ENST00000415030 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
SCN4B-202ENST00000415030 NUCB2P80303 420 aa14.38□□□□□ -0.11
SCN4B-202ENST00000415030 DNTTIP2Q5QJE6 756 aaKnown RBP14.38□□□□□ -0.11
SCN4B-202ENST00000415030 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
SCN4B-202ENST00000415030 ANKRD45Q5TZF3 282 aa14.38□□□□□ -0.11
SCN4B-202ENST00000415030 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
SCN4B-202ENST00000415030 MAP7D2Q96T17 732 aa14.37□□□□□ -0.11
SCN4B-202ENST00000415030 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
SCN4B-202ENST00000415030 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
SCN4B-202ENST00000415030 ARHGEF5Q12774 1597 aa14.37□□□□□ -0.11
SCN4B-202ENST00000415030 EVC2Q86UK5 1308 aa14.37□□□□□ -0.11
SCN4B-202ENST00000415030 LNPKQ9C0E8 428 aa14.37□□□□□ -0.11
SCN4B-202ENST00000415030 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
SCN4B-202ENST00000415030 PRDM15P57071 1507 aaPredicted RBP14.36□□□□□ -0.11
SCN4B-202ENST00000415030 ATF7IPQ6VMQ6 1270 aa14.36□□□□□ -0.11
SCN4B-202ENST00000415030 ST18O60284 1047 aa14.36□□□□□ -0.11
SCN4B-202ENST00000415030 ABCC2Q92887 1545 aa14.36□□□□□ -0.11
SCN4B-202ENST00000415030 CSPP1Q1MSJ5 1256 aa14.35□□□□□ -0.11
SCN4B-202ENST00000415030 SYAP1Q96A49 352 aaPredicted RBP14.35□□□□□ -0.11
SCN4B-202ENST00000415030 EXOSC9Q06265 439 aaKnown RBP14.34□□□□□ -0.11
SCN4B-202ENST00000415030 TERF2IPQ9NYB0 399 aa14.34□□□□□ -0.11
SCN4B-202ENST00000415030 DUOX2Q9NRD8 1548 aa14.34□□□□□ -0.11
SCN4B-202ENST00000415030 CCDC27Q2M243 656 aa14.34□□□□□ -0.11
SCN4B-202ENST00000415030 GCC1Q96CN9 775 aa14.34□□□□□ -0.11
SCN4B-202ENST00000415030 K7ELQ4 463 aaPredicted RBP14.33□□□□□ -0.11
SCN4B-202ENST00000415030 HDAC1Q13547 482 aaPredicted RBP14.33□□□□□ -0.12
SCN4B-202ENST00000415030 HDGFL2Q7Z4V5 671 aaPredicted RBP14.33□□□□□ -0.12
SCN4B-202ENST00000415030 PANK2Q9BZ23 570 aa14.33□□□□□ -0.12
SCN4B-202ENST00000415030 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.12
SCN4B-202ENST00000415030 NSD3Q9BZ95 1437 aa14.33□□□□□ -0.12
SCN4B-202ENST00000415030 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
SCN4B-202ENST00000415030 CROCC2H7BZ55 1655 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 MCCP23508 829 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 MTERF4Q7Z6M4 381 aaKnown RBP14.32□□□□□ -0.12
SCN4B-202ENST00000415030 MAGI2Q86UL8 1455 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 NUTM2FA1L443 756 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 CDC45O75419 566 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 ZSCAN30Q86W11 494 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 SNX21Q969T3 373 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 ADCY10Q96PN6 1610 aa14.32□□□□□ -0.12
SCN4B-202ENST00000415030 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
SCN4B-202ENST00000415030 RIPK4P57078 832 aa14.31□□□□□ -0.12
SCN4B-202ENST00000415030 TNPO1Q92973 898 aaKnown RBP14.31□□□□□ -0.12
SCN4B-202ENST00000415030 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
SCN4B-202ENST00000415030 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 USP19O94966 1318 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 FSD2A1L4K1 749 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 KIAA2012Q0VF49 1180 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 NOB1Q9ULX3 412 aaKnown RBP14.3□□□□□ -0.12
SCN4B-202ENST00000415030 WDR7Q9Y4E6 1490 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 RABEP1Q15276 862 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 ZNF428Q96B54 188 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 SLC12A5Q9H2X9 1139 aa14.3□□□□□ -0.12
SCN4B-202ENST00000415030 KIAA1211Q6ZU35 1233 aa14.29□□□□□ -0.12
SCN4B-202ENST00000415030 E9PCH4 1651 aa14.29□□□□□ -0.12
SCN4B-202ENST00000415030 RAPGEF3O95398 923 aa14.29□□□□□ -0.12
SCN4B-202ENST00000415030 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
SCN4B-202ENST00000415030 SYNMO15061 1565 aa14.29□□□□□ -0.12
SCN4B-202ENST00000415030 SYCP2Q9BX26 1530 aa14.29□□□□□ -0.12
SCN4B-202ENST00000415030 LMOD3Q0VAK6 560 aa14.29□□□□□ -0.12
SCN4B-202ENST00000415030 PDCL3Q9H2J4 239 aa14.29□□□□□ -0.12
SCN4B-202ENST00000415030 PHF14O94880 888 aa14.28□□□□□ -0.12
SCN4B-202ENST00000415030 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
SCN4B-202ENST00000415030 ABCC11Q96J66 1382 aa14.28□□□□□ -0.12
SCN4B-202ENST00000415030 LAMC1P11047 1609 aa14.28□□□□□ -0.12
SCN4B-202ENST00000415030 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
SCN4B-202ENST00000415030 RLBP1P12271 317 aa14.28□□□□□ -0.12
SCN4B-202ENST00000415030 MCTP1Q6DN14 999 aa14.28□□□□□ -0.12
SCN4B-202ENST00000415030 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms