RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 TONSLQ96HA7 1378 aa7.1□□□□□ -1.27
R3HDM1-203ENST00000409606 FOXD1Q16676 465 aa7.1□□□□□ -1.27
R3HDM1-203ENST00000409606 ADGRF5Q8IZF2 1346 aa7.1□□□□□ -1.27
R3HDM1-203ENST00000409606 NINLQ9Y2I6 1382 aa7.1□□□□□ -1.27
R3HDM1-203ENST00000409606 NPHP4O75161 1426 aaPredicted RBP7.09□□□□□ -1.27
R3HDM1-203ENST00000409606 PEAK1Q9H792 1746 aa7.09□□□□□ -1.28
R3HDM1-203ENST00000409606 METP08581 1390 aa7.08□□□□□ -1.28
R3HDM1-203ENST00000409606 USP47Q96K76 1375 aa7.08□□□□□ -1.28
R3HDM1-203ENST00000409606 COL3A1P02461 1466 aaPredicted RBP7.08□□□□□ -1.28
R3HDM1-203ENST00000409606 FBXO31Q5XUX0 539 aaPredicted RBP7.08□□□□□ -1.28
R3HDM1-203ENST00000409606 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.08□□□□□ -1.28
R3HDM1-203ENST00000409606 LTN1O94822 1766 aa7.08□□□□□ -1.28
R3HDM1-203ENST00000409606 CICQ96RK0 1608 aaPredicted RBP7.07□□□□□ -1.28
R3HDM1-203ENST00000409606 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
R3HDM1-203ENST00000409606 SHANK3Q9BYB0 1731 aa7.07□□□□□ -1.28
R3HDM1-203ENST00000409606 LRRC37A3O60309 1634 aa7.07□□□□□ -1.28
R3HDM1-203ENST00000409606 CCDC7Q96M83 1385 aa7.07□□□□□ -1.28
R3HDM1-203ENST00000409606 ITGAEP38570 1179 aa7.07□□□□□ -1.28
R3HDM1-203ENST00000409606 PARP4Q9UKK3 1724 aaKnown RBP7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 POLR3AO14802 1390 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 NFAT5O94916 1531 aa7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 SIPA1L3O60292 1781 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 NCAPD2Q15021 1401 aa7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 TOM1O60784 492 aa7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 ADGRL3Q9HAR2 1447 aa7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 BRD4O60885 1362 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 ROCK2O75116 1388 aaKnown RBP7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 KTN1Q86UP2 1357 aaKnown RBP7.06□□□□□ -1.28
R3HDM1-203ENST00000409606 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.05□□□□□ -1.28
R3HDM1-203ENST00000409606 TBX22Q9Y458 520 aa7.05□□□□□ -1.28
R3HDM1-203ENST00000409606 COL16A1Q07092 1604 aaPredicted RBP7.05□□□□□ -1.28
R3HDM1-203ENST00000409606 CCER1Q8TC90 406 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 N4BP2Q86UW6 1770 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 ESF1Q9H501 851 aaKnown RBP7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 PKD1L3Q7Z443 1732 aa7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 EIF3AQ14152 1382 aaKnown RBP7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 LTKP29376 864 aa7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 ROBO2Q9HCK4 1378 aa7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 PXDNQ92626 1479 aa7.04□□□□□ -1.28
R3HDM1-203ENST00000409606 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
R3HDM1-203ENST00000409606 MAP2P11137 1827 aaKnown RBP7.03□□□□□ -1.28
R3HDM1-203ENST00000409606 NWD2Q9ULI1 1742 aa7.03□□□□□ -1.28
R3HDM1-203ENST00000409606 PARD3Q8TEW0 1356 aa7.03□□□□□ -1.28
R3HDM1-203ENST00000409606 VGFO15240 615 aaPredicted RBP7.03□□□□□ -1.28
R3HDM1-203ENST00000409606 GGT6Q6P531 493 aa7.03□□□□□ -1.28
R3HDM1-203ENST00000409606 TRIM52Q96A61 297 aa7.03□□□□□ -1.28
R3HDM1-203ENST00000409606 PHF23Q9BUL5 403 aaPredicted RBP7.02□□□□□ -1.29
R3HDM1-203ENST00000409606 PLEKHG2Q9H7P9 1386 aa7.01□□□□□ -1.29
R3HDM1-203ENST00000409606 PAPPAQ13219 1627 aa7.01□□□□□ -1.29
R3HDM1-203ENST00000409606 C11orf95C9JLR9 678 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-203ENST00000409606 PER1O15534 1290 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-203ENST00000409606 HSPA2P54652 639 aa7.01□□□□□ -1.29
R3HDM1-203ENST00000409606 ZNF831Q5JPB2 1677 aa7□□□□□ -1.29
R3HDM1-203ENST00000409606 OVOS2A0A0J9YW53 1432 aa7□□□□□ -1.29
R3HDM1-203ENST00000409606 OVOS2Q6IE36 1432 aa7□□□□□ -1.29
R3HDM1-203ENST00000409606 UBAP1LF5GYI3 381 aa7□□□□□ -1.29
R3HDM1-203ENST00000409606 ROBO1Q9Y6N7 1651 aa7□□□□□ -1.29
R3HDM1-203ENST00000409606 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
R3HDM1-203ENST00000409606 KIF7Q2M1P5 1343 aa6.99□□□□□ -1.29
R3HDM1-203ENST00000409606 CDK12Q9NYV4 1490 aaPredicted RBP6.99□□□□□ -1.29
R3HDM1-203ENST00000409606 MYT1Q01538 1121 aa6.99□□□□□ -1.29
R3HDM1-203ENST00000409606 NSD2O96028 1365 aa6.99□□□□□ -1.29
R3HDM1-203ENST00000409606 USP31Q70CQ4 1352 aa6.99□□□□□ -1.29
R3HDM1-203ENST00000409606 DLG5Q8TDM6 1919 aa6.99□□□□□ -1.29
R3HDM1-203ENST00000409606 RGPD5Q99666 1765 aa6.98□□□□□ -1.29
R3HDM1-203ENST00000409606 ANKRD36BQ8N2N9 1353 aa6.98□□□□□ -1.29
R3HDM1-203ENST00000409606 PLEKHH1Q9ULM0 1364 aa6.98□□□□□ -1.29
R3HDM1-203ENST00000409606 THEMISQ8N1K5 641 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-203ENST00000409606 PHLPP1O60346 1717 aa6.98□□□□□ -1.29
R3HDM1-203ENST00000409606 HSPA5P11021 654 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-203ENST00000409606 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
R3HDM1-203ENST00000409606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.97□□□□□ -1.292e-7■■□□□ 12.2
R3HDM1-203ENST00000409606 PNPLA6Q8IY17 1366 aa6.97□□□□□ -1.29
R3HDM1-203ENST00000409606 ZNF316A6NFI3 1004 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-203ENST00000409606 GLI3P10071 1580 aa6.97□□□□□ -1.29
R3HDM1-203ENST00000409606 SCAF1Q9H7N4 1312 aaKnown RBP6.96□□□□□ -1.29
R3HDM1-203ENST00000409606 RGPD2P0DJD1 1756 aa6.96□□□□□ -1.29
R3HDM1-203ENST00000409606 BLMP54132 1417 aaPredicted RBP6.96□□□□□ -1.3
R3HDM1-203ENST00000409606 EDC4Q6P2E9 1401 aaKnown RBP6.96□□□□□ -1.3
R3HDM1-203ENST00000409606 UBR2Q8IWV8 1755 aa6.95□□□□□ -1.3
R3HDM1-203ENST00000409606 CFAP70Q5T0N1 1121 aa6.95□□□□□ -1.3
R3HDM1-203ENST00000409606 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
R3HDM1-203ENST00000409606 RREB1Q92766 1687 aa6.95□□□□□ -1.3
R3HDM1-203ENST00000409606 COL14A1Q05707 1796 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-203ENST00000409606 PELP1Q8IZL8 1130 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-203ENST00000409606 KDM3BQ7LBC6 1761 aa6.94□□□□□ -1.3
R3HDM1-203ENST00000409606 AATKQ6ZMQ8 1374 aa6.94□□□□□ -1.3
R3HDM1-203ENST00000409606 CEBPAP49715 358 aaPredicted RBP6.94□□□□□ -1.3
R3HDM1-203ENST00000409606 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
R3HDM1-203ENST00000409606 USP6P35125 1406 aa6.94□□□□□ -1.3
R3HDM1-203ENST00000409606 C1orf167Q5SNV9 1468 aa6.94□□□□□ -1.3
R3HDM1-203ENST00000409606 PLEKHG3A1L390 1219 aa6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 KCNA6P17658 529 aa6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 LRP6O75581 1613 aa6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 CENPJQ9HC77 1338 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 KIF24Q5T7B8 1368 aa6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 RGPD3A6NKT7 1758 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 RGPD4Q7Z3J3 1758 aa6.93□□□□□ -1.3
R3HDM1-203ENST00000409606 THSD7AQ9UPZ6 1657 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms