RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
VWA3B-201ENST00000409460 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
VWA3B-201ENST00000409460 KIF1BO60333 1816 aa12.51□□□□□ -0.41
VWA3B-201ENST00000409460 FOXO3O43524 673 aa12.51□□□□□ -0.41
VWA3B-201ENST00000409460 PHF8Q9UPP1 1060 aa12.51□□□□□ -0.41
VWA3B-201ENST00000409460 MST1RQ04912 1400 aa12.5□□□□□ -0.41
VWA3B-201ENST00000409460 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
VWA3B-201ENST00000409460 KRT28Q7Z3Y7 464 aa12.5□□□□□ -0.41
VWA3B-201ENST00000409460 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
VWA3B-201ENST00000409460 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
VWA3B-201ENST00000409460 ASXL1Q8IXJ9 1541 aa12.5□□□□□ -0.41
VWA3B-201ENST00000409460 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
VWA3B-201ENST00000409460 CHD2O14647 1828 aaKnown RBP12.49□□□□□ -0.41
VWA3B-201ENST00000409460 STRCP1A6NGW2 1772 aa12.49□□□□□ -0.41
VWA3B-201ENST00000409460 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
VWA3B-201ENST00000409460 SAFB2Q14151 953 aaKnown RBP eCLIP12.49□□□□□ -0.41
VWA3B-201ENST00000409460 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
VWA3B-201ENST00000409460 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
VWA3B-201ENST00000409460 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
VWA3B-201ENST00000409460 ARHGEF10O15013 1369 aa12.48□□□□□ -0.41
VWA3B-201ENST00000409460 RGS17Q9UGC6 210 aaPredicted RBP12.48□□□□□ -0.41
VWA3B-201ENST00000409460 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
VWA3B-201ENST00000409460 ABCC11Q96J66 1382 aa12.47□□□□□ -0.41
VWA3B-201ENST00000409460 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.41
VWA3B-201ENST00000409460 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.41
VWA3B-201ENST00000409460 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
VWA3B-201ENST00000409460 SOS2Q07890 1332 aaPredicted RBP12.46□□□□□ -0.42
VWA3B-201ENST00000409460 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.42
VWA3B-201ENST00000409460 XPCQ01831 940 aaPredicted RBP12.45□□□□□ -0.42
VWA3B-201ENST00000409460 DCAF11Q8TEB1 546 aa12.45□□□□□ -0.42
VWA3B-201ENST00000409460 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
VWA3B-201ENST00000409460 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
VWA3B-201ENST00000409460 PRAM1Q96QH2 718 aa12.44□□□□□ -0.42
VWA3B-201ENST00000409460 WAPLQ7Z5K2 1190 aa12.44□□□□□ -0.42
VWA3B-201ENST00000409460 BAG6P46379 1132 aa12.44□□□□□ -0.42
VWA3B-201ENST00000409460 EVA1CP58658 441 aa12.44□□□□□ -0.42
VWA3B-201ENST00000409460 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
VWA3B-201ENST00000409460 C14orf93Q9H972 538 aaKnown RBP12.44□□□□□ -0.42
VWA3B-201ENST00000409460 CLTCL1P53675 1640 aa12.43□□□□□ -0.42
VWA3B-201ENST00000409460 NEXMIFQ5QGS0 1516 aa12.43□□□□□ -0.42
VWA3B-201ENST00000409460 UNC5CLQ8IV45 518 aa12.43□□□□□ -0.42
VWA3B-201ENST00000409460 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
VWA3B-201ENST00000409460 TRAK1Q9UPV9 953 aa12.43□□□□□ -0.42
VWA3B-201ENST00000409460 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
VWA3B-201ENST00000409460 YTHDC2Q9H6S0 1430 aaKnown RBP12.42□□□□□ -0.42
VWA3B-201ENST00000409460 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
VWA3B-201ENST00000409460 ALKQ9UM73 1620 aa12.42□□□□□ -0.42
VWA3B-201ENST00000409460 PRDM11Q9NQV5 511 aa12.41□□□□□ -0.42
VWA3B-201ENST00000409460 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
VWA3B-201ENST00000409460 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
VWA3B-201ENST00000409460 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
VWA3B-201ENST00000409460 GJD4Q96KN9 370 aaPredicted RBP12.4□□□□□ -0.42
VWA3B-201ENST00000409460 SHPRHQ149N8 1683 aa12.4□□□□□ -0.42
VWA3B-201ENST00000409460 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
VWA3B-201ENST00000409460 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
VWA3B-201ENST00000409460 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
VWA3B-201ENST00000409460 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
VWA3B-201ENST00000409460 SPATA31A3Q5VYP0 1347 aa12.38□□□□□ -0.43
VWA3B-201ENST00000409460 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
VWA3B-201ENST00000409460 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
VWA3B-201ENST00000409460 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
VWA3B-201ENST00000409460 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
VWA3B-201ENST00000409460 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
VWA3B-201ENST00000409460 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
VWA3B-201ENST00000409460 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
VWA3B-201ENST00000409460 CDC42BPGQ6DT37 1551 aa12.36□□□□□ -0.43
VWA3B-201ENST00000409460 LRP6O75581 1613 aa12.36□□□□□ -0.43
VWA3B-201ENST00000409460 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
VWA3B-201ENST00000409460 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
VWA3B-201ENST00000409460 WASLO00401 505 aaPredicted RBP12.35□□□□□ -0.43
VWA3B-201ENST00000409460 TECPR2O15040 1411 aa12.35□□□□□ -0.43
VWA3B-201ENST00000409460 HIRIP3Q9BW71 556 aaPredicted RBP12.35□□□□□ -0.43
VWA3B-201ENST00000409460 VPS72Q15906 364 aa12.34□□□□□ -0.43
VWA3B-201ENST00000409460 PRAG1Q86YV5 1406 aa12.34□□□□□ -0.43
VWA3B-201ENST00000409460 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
VWA3B-201ENST00000409460 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
VWA3B-201ENST00000409460 NBPF8Q3BBV2 869 aa12.33□□□□□ -0.44
VWA3B-201ENST00000409460 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
VWA3B-201ENST00000409460 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
VWA3B-201ENST00000409460 MYOM2P54296 1465 aa12.33□□□□□ -0.44
VWA3B-201ENST00000409460 PIK3C2GO75747 1445 aa12.32□□□□□ -0.44
VWA3B-201ENST00000409460 SPATA31E1Q6ZUB1 1445 aa12.32□□□□□ -0.44
VWA3B-201ENST00000409460 STRN4Q9NRL3 753 aa12.31□□□□□ -0.44
VWA3B-201ENST00000409460 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
VWA3B-201ENST00000409460 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
VWA3B-201ENST00000409460 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
VWA3B-201ENST00000409460 NUDT16Q96DE0 195 aaKnown RBP12.31□□□□□ -0.44
VWA3B-201ENST00000409460 LAMC1P11047 1609 aa12.31□□□□□ -0.44
VWA3B-201ENST00000409460 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
VWA3B-201ENST00000409460 NHSL1Q5SYE7 1610 aa12.3□□□□□ -0.44
VWA3B-201ENST00000409460 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
VWA3B-201ENST00000409460 RGS12O14924 1447 aa12.3□□□□□ -0.44
VWA3B-201ENST00000409460 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
VWA3B-201ENST00000409460 ATRNO75882 1429 aa12.29□□□□□ -0.44
VWA3B-201ENST00000409460 EVC2Q86UK5 1308 aa12.29□□□□□ -0.44
VWA3B-201ENST00000409460 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
VWA3B-201ENST00000409460 BLMP54132 1417 aaPredicted RBP12.29□□□□□ -0.44
VWA3B-201ENST00000409460 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
VWA3B-201ENST00000409460 NRXN3Q9Y4C0 1643 aa12.28□□□□□ -0.44
VWA3B-201ENST00000409460 CDK19Q9BWU1 502 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms