RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 RAD51AP2Q09MP3 1159 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 SF3A1Q15459 793 aaKnown RBP5.91□□□□□ -1.46
GTDC1-206ENST00000409214 LDLRAD1Q5T700 205 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 TANGO6Q9C0B7 1094 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 CCDC194A0A1B0GVG4 234 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 PSEN1P49768 467 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 RALBP1Q15311 655 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 CSPP1Q1MSJ5 1256 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 PPP1R15BQ5SWA1 713 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 PNMA2Q9UL42 364 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 G3BP2Q9UN86 482 aaKnown RBP5.91□□□□□ -1.46
GTDC1-206ENST00000409214 FAN1Q9Y2M0 1017 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 QPCTQ16769 361 aa5.91□□□□□ -1.46
GTDC1-206ENST00000409214 DMGDHQ9UI17 866 aaKnown RBP5.91□□□□□ -1.46
GTDC1-206ENST00000409214 AAMPQ13685 434 aa5.9□□□□□ -1.46
GTDC1-206ENST00000409214 PTPROQ16827 1216 aa5.9□□□□□ -1.46
GTDC1-206ENST00000409214 FBXO33Q7Z6M2 555 aa5.9□□□□□ -1.46
GTDC1-206ENST00000409214 BANK1Q8NDB2 785 aa5.9□□□□□ -1.46
GTDC1-206ENST00000409214 PIK3R5Q8WYR1 880 aa5.9□□□□□ -1.46
GTDC1-206ENST00000409214 CHPF2Q9P2E5 772 aa5.9□□□□□ -1.46
GTDC1-206ENST00000409214 TBX22Q9Y458 520 aa5.9□□□□□ -1.46
GTDC1-206ENST00000409214 TLDC2A0PJX2 215 aa5.9□□□□□ -1.47
GTDC1-206ENST00000409214 SOWAHDA6NJG2 315 aa5.9□□□□□ -1.47
GTDC1-206ENST00000409214 ATG7O95352 703 aa5.9□□□□□ -1.47
GTDC1-206ENST00000409214 hCG_2014768A0A024R1R8 64 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 U2SURPO15042 1029 aaKnown RBP5.89□□□□□ -1.47
GTDC1-206ENST00000409214 TNNI2P48788 182 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 SDE2Q6IQ49 451 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 JAZF1Q86VZ6 243 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 SPOCK3Q9BQ16 436 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 GPCPD1Q9NPB8 672 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 RPS6KL1Q9Y6S9 549 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 GTF2F1P35269 517 aaKnown RBP eCLIP5.89□□□□□ -1.47
GTDC1-206ENST00000409214 PRR7Q8TB68 274 aa5.89□□□□□ -1.47
GTDC1-206ENST00000409214 NLRP6P59044 892 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 PMFBP1Q8TBY8 1022 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 CCER1Q8TC90 406 aaPredicted RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 DDX12PQ92771 950 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 HMX1Q9NP08 348 aaPredicted RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 TMA7Q9Y2S6 64 aaKnown RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 MAFBQ9Y5Q3 323 aaPredicted RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 CREB3O43889 395 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 PTGDRQ13258 359 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 OS9Q13438 667 aaPredicted RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 TBC1D9Q6ZT07 1266 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 STAG1Q8WVM7 1258 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 GJD4Q96KN9 370 aaPredicted RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 BIN2Q9UBW5 565 aaPredicted RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 PRR12Q9ULL5 1215 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 SETQ01105 290 aaPredicted RBP5.88□□□□□ -1.47
GTDC1-206ENST00000409214 MORC4Q8TE76 937 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 KCNB2Q92953 911 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 FAM161BQ96MY7 647 aa5.88□□□□□ -1.47
GTDC1-206ENST00000409214 LHX8Q68G74 356 aa5.87□□□□□ -1.47
GTDC1-206ENST00000409214 RPUSD2Q8IZ73 545 aaKnown RBP5.87□□□□□ -1.47
GTDC1-206ENST00000409214 RNF19AQ9NV58 838 aa5.87□□□□□ -1.47
GTDC1-206ENST00000409214 PRKAG2Q9UGJ0 569 aa5.87□□□□□ -1.47
GTDC1-206ENST00000409214 TINF2Q9BSI4 451 aa5.87□□□□□ -1.47
GTDC1-206ENST00000409214 DCAF1Q9Y4B6 1507 aa5.87□□□□□ -1.47
GTDC1-206ENST00000409214 FCHSD2O94868 740 aa5.86□□□□□ -1.47
GTDC1-206ENST00000409214 DSG2Q14126 1118 aa5.86□□□□□ -1.47
GTDC1-206ENST00000409214 HELBQ8NG08 1087 aaPredicted RBP5.86□□□□□ -1.47
GTDC1-206ENST00000409214 FAM217BQ9NTX9 383 aaPredicted RBP5.86□□□□□ -1.47
GTDC1-206ENST00000409214 KCNG1Q9UIX4 513 aa5.86□□□□□ -1.47
GTDC1-206ENST00000409214 IGBP1P78318 339 aa5.86□□□□□ -1.47
GTDC1-206ENST00000409214 WWC1Q8IX03 1113 aa5.86□□□□□ -1.47
GTDC1-206ENST00000409214 CDHR5Q9HBB8 845 aa5.86□□□□□ -1.47
GTDC1-206ENST00000409214 ANO2Q9NQ90 1003 aa5.86□□□□□ -1.47
GTDC1-206ENST00000409214 MRPL42Q9Y6G3 142 aaKnown RBP5.86□□□□□ -1.47
GTDC1-206ENST00000409214 AP1G2O75843 785 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 ALG2Q9H553 416 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 VAMP1P23763 118 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 CLCN1P35523 988 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 NOP9Q86U38 636 aaKnown RBP5.85□□□□□ -1.47
GTDC1-206ENST00000409214 TSPYL2Q9H2G4 693 aaPredicted RBP5.85□□□□□ -1.47
GTDC1-206ENST00000409214 ZSWIM4Q9H7M6 989 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 C19orf67A6NJJ6 358 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 PRKAR2AP13861 404 aaKnown RBP5.85□□□□□ -1.47
GTDC1-206ENST00000409214 SSFA2P28290 1259 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 BMS1Q14692 1282 aaKnown RBP5.85□□□□□ -1.47
GTDC1-206ENST00000409214 CLEC11AQ9Y240 323 aa5.85□□□□□ -1.47
GTDC1-206ENST00000409214 SLFNL1Q499Z3 407 aa5.84□□□□□ -1.47
GTDC1-206ENST00000409214 NT5DC4Q86YG4 428 aa5.84□□□□□ -1.47
GTDC1-206ENST00000409214 PPP2R2DQ66LE6 453 aa5.84□□□□□ -1.48
GTDC1-206ENST00000409214 ERCC3P19447 782 aa5.83□□□□□ -1.48
GTDC1-206ENST00000409214 PTMSP20962 102 aa5.83□□□□□ -1.48
GTDC1-206ENST00000409214 ZFYVE27Q5T4F4 411 aa5.83□□□□□ -1.48
GTDC1-206ENST00000409214 PPP1R3GB7ZBB8 358 aa5.83□□□□□ -1.48
GTDC1-206ENST00000409214 KANK4Q5T7N3 995 aaPredicted RBP5.83□□□□□ -1.48
GTDC1-206ENST00000409214 METTL16Q86W50 562 aaKnown RBP5.83□□□□□ -1.48
GTDC1-206ENST00000409214 EPS8L1Q8TE68 723 aa5.83□□□□□ -1.48
GTDC1-206ENST00000409214 USP17L8P0C7I0 530 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 APLP1P51693 650 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 MCCD1P59942 119 aaPredicted RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 TMEM259Q4ZIN3 620 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 RTL5Q5HYW3 569 aaPredicted RBP5.82□□□□□ -1.48
GTDC1-206ENST00000409214 ACBD3Q9H3P7 528 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 PIK3CDO00329 1044 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 GABBR2O75899 941 aa5.82□□□□□ -1.48
GTDC1-206ENST00000409214 KIF4AO95239 1232 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms