RNA–Protein interactions for RNA: ENST00000407797.6

C5orf56-204, Transcript of chromosome 5 open reading frame 56, humanhuman

TSL 5

Gene C5orf56, Length 1,570 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-204ENST00000407797 PIK3C2GO75747 1445 aa18.53■□□□□ 0.56
C5orf56-204ENST00000407797 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.56
C5orf56-204ENST00000407797 CCDC184Q52MB2 194 aa18.52■□□□□ 0.56
C5orf56-204ENST00000407797 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.55
C5orf56-204ENST00000407797 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
C5orf56-204ENST00000407797 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
C5orf56-204ENST00000407797 SBNO2Q9Y2G9 1366 aa18.51■□□□□ 0.55
C5orf56-204ENST00000407797 PPLO60437 1756 aa18.5■□□□□ 0.55
C5orf56-204ENST00000407797 PARD3Q8TEW0 1356 aa18.49■□□□□ 0.55
C5orf56-204ENST00000407797 FAM9BQ8IZU0 186 aa18.48■□□□□ 0.55
C5orf56-204ENST00000407797 MSH6P52701 1360 aa18.47■□□□□ 0.55
C5orf56-204ENST00000407797 PANK3Q9H999 370 aa18.47■□□□□ 0.55
C5orf56-204ENST00000407797 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
C5orf56-204ENST00000407797 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
C5orf56-204ENST00000407797 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
C5orf56-204ENST00000407797 NCOA3Q9Y6Q9 1424 aa18.46■□□□□ 0.55
C5orf56-204ENST00000407797 ZBED9Q6R2W3 1325 aa18.46■□□□□ 0.55
C5orf56-204ENST00000407797 NLRP13Q86W25 1043 aa18.46■□□□□ 0.55
C5orf56-204ENST00000407797 RBM33Q96EV2 1170 aaKnown RBP18.46■□□□□ 0.55
C5orf56-204ENST00000407797 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
C5orf56-204ENST00000407797 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
C5orf56-204ENST00000407797 CENPJQ9HC77 1338 aaPredicted RBP18.43■□□□□ 0.54
C5orf56-204ENST00000407797 XRN1Q8IZH2 1706 aaKnown RBP18.43■□□□□ 0.54
C5orf56-204ENST00000407797 METP08581 1390 aa18.43■□□□□ 0.54
C5orf56-204ENST00000407797 ADGRB1O14514 1584 aa18.43■□□□□ 0.54
C5orf56-204ENST00000407797 PTPRUQ92729 1446 aa18.43■□□□□ 0.54
C5orf56-204ENST00000407797 NPC1L1Q9UHC9 1359 aa18.41■□□□□ 0.54
C5orf56-204ENST00000407797 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
C5orf56-204ENST00000407797 HSPA1LP34931 641 aa18.4■□□□□ 0.54
C5orf56-204ENST00000407797 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
C5orf56-204ENST00000407797 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
C5orf56-204ENST00000407797 NEFLP07196 543 aa18.39■□□□□ 0.53
C5orf56-204ENST00000407797 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
C5orf56-204ENST00000407797 INSRP06213 1382 aa18.39■□□□□ 0.53
C5orf56-204ENST00000407797 LRPPRCP42704 1394 aaKnown RBP18.39■□□□□ 0.53
C5orf56-204ENST00000407797 C19orf44Q9H6X5 657 aa18.38■□□□□ 0.53
C5orf56-204ENST00000407797 FAM135BQ49AJ0 1406 aa18.38■□□□□ 0.53
C5orf56-204ENST00000407797 ATF3P18847 181 aa18.37■□□□□ 0.53
C5orf56-204ENST00000407797 CADPS2Q86UW7 1296 aa18.37■□□□□ 0.53
C5orf56-204ENST00000407797 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.36■□□□□ 0.53
C5orf56-204ENST00000407797 CNGB1Q14028 1251 aaPredicted RBP18.36■□□□□ 0.53
C5orf56-204ENST00000407797 SLAIN2Q9P270 581 aa18.35■□□□□ 0.53
C5orf56-204ENST00000407797 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
C5orf56-204ENST00000407797 ROBO1Q9Y6N7 1651 aa18.34■□□□□ 0.53
C5orf56-204ENST00000407797 TRAK1Q9UPV9 953 aa18.34■□□□□ 0.53
C5orf56-204ENST00000407797 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
C5orf56-204ENST00000407797 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
C5orf56-204ENST00000407797 DCCP43146 1447 aa18.33■□□□□ 0.53
C5orf56-204ENST00000407797 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
C5orf56-204ENST00000407797 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
C5orf56-204ENST00000407797 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
C5orf56-204ENST00000407797 ADGRL3Q9HAR2 1447 aa18.3■□□□□ 0.52
C5orf56-204ENST00000407797 MYOM1P52179 1685 aa18.3■□□□□ 0.52
C5orf56-204ENST00000407797 EVC2Q86UK5 1308 aa18.29■□□□□ 0.52
C5orf56-204ENST00000407797 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
C5orf56-204ENST00000407797 NALCNQ8IZF0 1738 aa18.29■□□□□ 0.52
C5orf56-204ENST00000407797 FKBP8Q14318 412 aa18.28■□□□□ 0.52
C5orf56-204ENST00000407797 ERICH6BQ5W0A0 696 aa18.27■□□□□ 0.52
C5orf56-204ENST00000407797 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.52
C5orf56-204ENST00000407797 STK26Q9P289 416 aa18.26■□□□□ 0.51
C5orf56-204ENST00000407797 KNDC1Q76NI1 1749 aa18.26■□□□□ 0.51
C5orf56-204ENST00000407797 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
C5orf56-204ENST00000407797 TECPR2O15040 1411 aa18.25■□□□□ 0.51
C5orf56-204ENST00000407797 PHLPP1O60346 1717 aa18.25■□□□□ 0.51
C5orf56-204ENST00000407797 NINLQ9Y2I6 1382 aa18.25■□□□□ 0.51
C5orf56-204ENST00000407797 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
C5orf56-204ENST00000407797 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
C5orf56-204ENST00000407797 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
C5orf56-204ENST00000407797 ARHGEF28Q8N1W1 1705 aaKnown RBP18.24■□□□□ 0.51
C5orf56-204ENST00000407797 MST1RQ04912 1400 aa18.22■□□□□ 0.51
C5orf56-204ENST00000407797 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
C5orf56-204ENST00000407797 NUDCQ9Y266 331 aa18.21■□□□□ 0.51
C5orf56-204ENST00000407797 MED1Q15648 1581 aaPredicted RBP18.21■□□□□ 0.51
C5orf56-204ENST00000407797 CARD14Q9BXL6 1004 aa18.21■□□□□ 0.51
C5orf56-204ENST00000407797 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
C5orf56-204ENST00000407797 DLC1Q96QB1 1528 aa18.2■□□□□ 0.5
C5orf56-204ENST00000407797 BRINP3Q76B58 766 aa18.2■□□□□ 0.5
C5orf56-204ENST00000407797 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
C5orf56-204ENST00000407797 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
C5orf56-204ENST00000407797 TULP4Q9NRJ4 1543 aa18.19■□□□□ 0.5
C5orf56-204ENST00000407797 CDC42BPGQ6DT37 1551 aa18.19■□□□□ 0.5
C5orf56-204ENST00000407797 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
C5orf56-204ENST00000407797 ATAD2Q6PL18 1390 aa18.18■□□□□ 0.5
C5orf56-204ENST00000407797 POGKQ9P215 609 aa18.17■□□□□ 0.5
C5orf56-204ENST00000407797 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
C5orf56-204ENST00000407797 COL16A1Q07092 1604 aaPredicted RBP18.17■□□□□ 0.5
C5orf56-204ENST00000407797 NSD2O96028 1365 aa18.17■□□□□ 0.5
C5orf56-204ENST00000407797 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
C5orf56-204ENST00000407797 C1orf167Q5SNV9 1468 aa18.17■□□□□ 0.5
C5orf56-204ENST00000407797 USP32Q8NFA0 1604 aa18.17■□□□□ 0.5
C5orf56-204ENST00000407797 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
C5orf56-204ENST00000407797 NSD3Q9BZ95 1437 aa18.16■□□□□ 0.5
C5orf56-204ENST00000407797 JCADQ9P266 1359 aa18.16■□□□□ 0.5
C5orf56-204ENST00000407797 CGNL1Q0VF96 1302 aa18.15■□□□□ 0.5
C5orf56-204ENST00000407797 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
C5orf56-204ENST00000407797 NHSL1Q5SYE7 1610 aa18.15■□□□□ 0.5
C5orf56-204ENST00000407797 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
C5orf56-204ENST00000407797 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
C5orf56-204ENST00000407797 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
C5orf56-204ENST00000407797 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms