RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
HERC3-203ENST00000407637 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
HERC3-203ENST00000407637 PRDM15P57071 1507 aaPredicted RBP15.93■□□□□ 0.14
HERC3-203ENST00000407637 LETM1O95202 739 aaPredicted RBP15.93■□□□□ 0.14
HERC3-203ENST00000407637 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
HERC3-203ENST00000407637 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
HERC3-203ENST00000407637 ITSN2Q9NZM3 1697 aa15.92■□□□□ 0.14
HERC3-203ENST00000407637 CD2BP2O95400 341 aaKnown RBP15.92■□□□□ 0.14
HERC3-203ENST00000407637 ZSCAN23Q3MJ62 389 aa15.92■□□□□ 0.14
HERC3-203ENST00000407637 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
HERC3-203ENST00000407637 BCL2L13Q9BXK5 485 aa15.92■□□□□ 0.14
HERC3-203ENST00000407637 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
HERC3-203ENST00000407637 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
HERC3-203ENST00000407637 ANKRD50Q9ULJ7 1429 aa15.91■□□□□ 0.14
HERC3-203ENST00000407637 VGLL3A8MV65 326 aa15.91■□□□□ 0.14
HERC3-203ENST00000407637 BAG4O95429 457 aaKnown RBP15.91■□□□□ 0.14
HERC3-203ENST00000407637 RBM25P49756 843 aaKnown RBP15.91■□□□□ 0.14
HERC3-203ENST00000407637 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
HERC3-203ENST00000407637 TMF1P82094 1093 aa15.91■□□□□ 0.14
HERC3-203ENST00000407637 ATP2B3Q16720 1220 aa15.91■□□□□ 0.14
HERC3-203ENST00000407637 MCM5P33992 734 aa15.9■□□□□ 0.14
HERC3-203ENST00000407637 MYRIPQ8NFW9 859 aa15.9■□□□□ 0.14
HERC3-203ENST00000407637 IPO4Q8TEX9 1081 aaKnown RBP15.9■□□□□ 0.14
HERC3-203ENST00000407637 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
HERC3-203ENST00000407637 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
HERC3-203ENST00000407637 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
HERC3-203ENST00000407637 PRIM1P49642 420 aaKnown RBP15.89■□□□□ 0.13
HERC3-203ENST00000407637 RARSP54136 660 aaKnown RBP15.89■□□□□ 0.13
HERC3-203ENST00000407637 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
HERC3-203ENST00000407637 LAMC1P11047 1609 aa15.88■□□□□ 0.13
HERC3-203ENST00000407637 WDR7Q9Y4E6 1490 aa15.88■□□□□ 0.13
HERC3-203ENST00000407637 CCDC39Q9UFE4 941 aa15.88■□□□□ 0.13
HERC3-203ENST00000407637 MCTP1Q6DN14 999 aa15.87■□□□□ 0.13
HERC3-203ENST00000407637 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
HERC3-203ENST00000407637 GAS2L2Q8NHY3 880 aa15.87■□□□□ 0.13
HERC3-203ENST00000407637 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
HERC3-203ENST00000407637 K7ELQ4 463 aaPredicted RBP15.86■□□□□ 0.13
HERC3-203ENST00000407637 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
HERC3-203ENST00000407637 DNTTIP2Q5QJE6 756 aaKnown RBP15.86■□□□□ 0.13
HERC3-203ENST00000407637 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
HERC3-203ENST00000407637 CLEC17AQ6ZS10 378 aa15.86■□□□□ 0.13
HERC3-203ENST00000407637 ZBTB22O15209 634 aa15.85■□□□□ 0.13
HERC3-203ENST00000407637 KIF2CQ99661 725 aa15.85■□□□□ 0.13
HERC3-203ENST00000407637 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
HERC3-203ENST00000407637 IGSF3O75054 1194 aa15.85■□□□□ 0.13
HERC3-203ENST00000407637 KIAA2012Q0VF49 1180 aa15.85■□□□□ 0.13
HERC3-203ENST00000407637 WWC1Q8IX03 1113 aa15.85■□□□□ 0.13
HERC3-203ENST00000407637 ZNF830Q96NB3 372 aaPredicted RBP15.85■□□□□ 0.13
HERC3-203ENST00000407637 RBM27Q9P2N5 1060 aaKnown RBP15.85■□□□□ 0.13
HERC3-203ENST00000407637 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
HERC3-203ENST00000407637 ARHGAP31Q2M1Z3 1444 aa15.84■□□□□ 0.13
HERC3-203ENST00000407637 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
HERC3-203ENST00000407637 ASXL1Q8IXJ9 1541 aa15.84■□□□□ 0.13
HERC3-203ENST00000407637 CGNQ9P2M7 1197 aaKnown RBP15.83■□□□□ 0.13
HERC3-203ENST00000407637 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.13
HERC3-203ENST00000407637 CFDP1Q9UEE9 299 aaPredicted RBP15.83■□□□□ 0.12
HERC3-203ENST00000407637 MYO5CQ9NQX4 1742 aa15.83■□□□□ 0.12
HERC3-203ENST00000407637 MVPQ14764 893 aaKnown RBP15.82■□□□□ 0.12
HERC3-203ENST00000407637 PLCD3Q8N3E9 789 aa15.82■□□□□ 0.12
HERC3-203ENST00000407637 LMBRD1Q9NUN5 540 aa15.82■□□□□ 0.12
HERC3-203ENST00000407637 TAF7LQ5H9L4 462 aa15.82■□□□□ 0.12
HERC3-203ENST00000407637 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.82■□□□□ 0.12
HERC3-203ENST00000407637 A2MP01023 1474 aa15.82■□□□□ 0.12
HERC3-203ENST00000407637 PTMAP06454 111 aaKnown RBP15.81■□□□□ 0.12
HERC3-203ENST00000407637 NEUROD2Q15784 382 aa15.81■□□□□ 0.12
HERC3-203ENST00000407637 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
HERC3-203ENST00000407637 ADCY10Q96PN6 1610 aa15.81■□□□□ 0.12
HERC3-203ENST00000407637 RNF214Q8ND24 703 aa15.8■□□□□ 0.12
HERC3-203ENST00000407637 PRIMPOLQ96LW4 560 aa15.8■□□□□ 0.12
HERC3-203ENST00000407637 GTF2F1P35269 517 aaKnown RBP eCLIP15.8■□□□□ 0.12
HERC3-203ENST00000407637 SYNMO15061 1565 aa15.79■□□□□ 0.12
HERC3-203ENST00000407637 GPT2Q8TD30 523 aa15.79■□□□□ 0.12
HERC3-203ENST00000407637 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
HERC3-203ENST00000407637 SYCE3A1L190 88 aa15.79■□□□□ 0.12
HERC3-203ENST00000407637 HMGN5P82970 282 aaKnown RBP15.78■□□□□ 0.12
HERC3-203ENST00000407637 TAF3Q5VWG9 929 aa15.78■□□□□ 0.12
HERC3-203ENST00000407637 LRSAM1Q6UWE0 723 aa15.78■□□□□ 0.12
HERC3-203ENST00000407637 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
HERC3-203ENST00000407637 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
HERC3-203ENST00000407637 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
HERC3-203ENST00000407637 MPNDQ8N594 471 aa15.78■□□□□ 0.12
HERC3-203ENST00000407637 KIF3AQ9Y496 699 aa15.78■□□□□ 0.12
HERC3-203ENST00000407637 IQGAP2Q13576 1575 aa15.77■□□□□ 0.12
HERC3-203ENST00000407637 PKP1Q13835 747 aa15.77■□□□□ 0.12
HERC3-203ENST00000407637 PDCL2Q8N4E4 241 aa15.77■□□□□ 0.12
HERC3-203ENST00000407637 NGEFQ8N5V2 710 aa15.77■□□□□ 0.12
HERC3-203ENST00000407637 EIF2AK4Q9P2K8 1649 aaKnown RBP15.77■□□□□ 0.12
HERC3-203ENST00000407637 PRPF40AO75400 957 aaKnown RBP15.77■□□□□ 0.11
HERC3-203ENST00000407637 CDK11BP21127 795 aaKnown RBP15.77■□□□□ 0.11
HERC3-203ENST00000407637 U2AF2P26368 475 aaKnown RBP eCLIP15.77■□□□□ 0.11
HERC3-203ENST00000407637 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.11
HERC3-203ENST00000407637 TMEM63CQ9P1W3 806 aa15.77■□□□□ 0.11
HERC3-203ENST00000407637 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
HERC3-203ENST00000407637 PTPRGP23470 1445 aa15.76■□□□□ 0.11
HERC3-203ENST00000407637 MYOM1P52179 1685 aa15.76■□□□□ 0.11
HERC3-203ENST00000407637 C17orf53Q8N3J3 647 aaPredicted RBP15.76■□□□□ 0.11
HERC3-203ENST00000407637 LNPKQ9C0E8 428 aa15.75■□□□□ 0.11
HERC3-203ENST00000407637 KIF16BQ96L93 1317 aa15.75■□□□□ 0.11
HERC3-203ENST00000407637 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
HERC3-203ENST00000407637 RNF17Q9BXT8 1623 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms