RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 SASS6Q6UVJ0 657 aa9.03□□□□□ -0.96
HDAC9-202ENST00000405010 KIF3BO15066 747 aa9.03□□□□□ -0.96
HDAC9-202ENST00000405010 TNNT3P45378 269 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-202ENST00000405010 TROQ12816 1431 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-202ENST00000405010 ABCA10Q8WWZ4 1543 aa9.03□□□□□ -0.96
HDAC9-202ENST00000405010 OFD1O75665 1012 aa9.03□□□□□ -0.96
HDAC9-202ENST00000405010 HDGFL2Q7Z4V5 671 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-202ENST00000405010 C1orf115Q9H7X2 142 aa9.03□□□□□ -0.96
HDAC9-202ENST00000405010 TOPBP1Q92547 1522 aa9.02□□□□□ -0.96
HDAC9-202ENST00000405010 KLHL40Q2TBA0 621 aa9.02□□□□□ -0.96
HDAC9-202ENST00000405010 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.96
HDAC9-202ENST00000405010 GRIN2BQ13224 1484 aa9.02□□□□□ -0.96
HDAC9-202ENST00000405010 SYCE3A1L190 88 aa9.02□□□□□ -0.97
HDAC9-202ENST00000405010 OS9Q13438 667 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-202ENST00000405010 GCC1Q96CN9 775 aa9.02□□□□□ -0.97
HDAC9-202ENST00000405010 BAG4O95429 457 aaKnown RBP9.02□□□□□ -0.97
HDAC9-202ENST00000405010 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
HDAC9-202ENST00000405010 DYNC1I1O14576 645 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 SLC4A10Q6U841 1118 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 RILPL2Q969X0 211 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 ATP6V1DQ9Y5K8 247 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 NESP48681 1621 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 CT47B1P0C2W7 299 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-202ENST00000405010 NEK4P51957 841 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 ZNF592Q92610 1267 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 API5Q9BZZ5 524 aaKnown RBP9.01□□□□□ -0.97
HDAC9-202ENST00000405010 TERF2IPQ9NYB0 399 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 CFAP70Q5T0N1 1121 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 SPINK5Q9NQ38 1064 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-202ENST00000405010 SNAPC4Q5SXM2 1469 aa9.01□□□□□ -0.97
HDAC9-202ENST00000405010 FGD1P98174 961 aa9□□□□□ -0.97
HDAC9-202ENST00000405010 ANO2Q9NQ90 1003 aa9□□□□□ -0.97
HDAC9-202ENST00000405010 SPAG9O60271 1321 aaKnown RBP9□□□□□ -0.97
HDAC9-202ENST00000405010 TCOF1Q13428 1488 aaKnown RBP9□□□□□ -0.97
HDAC9-202ENST00000405010 CBX1P83916 185 aa9□□□□□ -0.97
HDAC9-202ENST00000405010 KIF3AQ9Y496 699 aa9□□□□□ -0.97
HDAC9-202ENST00000405010 FSD2A1L4K1 749 aa9□□□□□ -0.97
HDAC9-202ENST00000405010 CAMSAP2Q08AD1 1489 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 SCAPERQ9BY12 1400 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 DIAPH1O60610 1272 aaKnown RBP8.99□□□□□ -0.97
HDAC9-202ENST00000405010 RLBP1P12271 317 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 MCM5P33992 734 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 SLC12A5Q9H2X9 1139 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 TNNQ9UQP3 1299 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 CUL7Q14999 1698 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 LMOD3Q0VAK6 560 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 SSH1Q8WYL5 1049 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 CHMP3Q9Y3E7 222 aa8.99□□□□□ -0.97
HDAC9-202ENST00000405010 SNX21Q969T3 373 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 RAB3GAP1Q15042 981 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 SMC5Q8IY18 1101 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 TESK2Q96S53 571 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 ZMYM4Q5VZL5 1548 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 EVC2Q86UK5 1308 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 TRIM27P14373 513 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 PDCL2Q8N4E4 241 aa8.98□□□□□ -0.97
HDAC9-202ENST00000405010 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-202ENST00000405010 THOC2Q8NI27 1593 aaKnown RBP8.98□□□□□ -0.97
HDAC9-202ENST00000405010 ZSCAN23Q3MJ62 389 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 GGT6Q6P531 493 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 ZKSCAN5Q9Y2L8 839 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 BLMP54132 1417 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-202ENST00000405010 NUTM2DQ5VT03 806 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-202ENST00000405010 ANTXR1Q9H6X2 564 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 GPRASP1Q5JY77 1395 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 HTATSF1O43719 755 aaKnown RBP8.97□□□□□ -0.97
HDAC9-202ENST00000405010 BMP2KLQ5H9B9 411 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 GGNBP2Q9H3C7 697 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 RBM27Q9P2N5 1060 aaKnown RBP8.97□□□□□ -0.97
HDAC9-202ENST00000405010 MCM2P49736 904 aa8.97□□□□□ -0.97
HDAC9-202ENST00000405010 TPM3P06753 285 aa8.96□□□□□ -0.97
HDAC9-202ENST00000405010 TBC1D9Q6ZT07 1266 aa8.96□□□□□ -0.97
HDAC9-202ENST00000405010 SPC24Q8NBT2 197 aa8.96□□□□□ -0.97
HDAC9-202ENST00000405010 NAP1L2Q9ULW6 460 aaPredicted RBP8.96□□□□□ -0.97
HDAC9-202ENST00000405010 GOLGA6L19H0YKK7 550 aa8.96□□□□□ -0.98
HDAC9-202ENST00000405010 HS1BP3Q53T59 392 aa8.96□□□□□ -0.98
HDAC9-202ENST00000405010 HDAC1Q13547 482 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-202ENST00000405010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.96□□□□□ -0.98
HDAC9-202ENST00000405010 STK31Q9BXU1 1019 aa8.96□□□□□ -0.98
HDAC9-202ENST00000405010 PZPP20742 1482 aa8.96□□□□□ -0.98
HDAC9-202ENST00000405010 INSRP06213 1382 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 CCDC66A2RUB6 948 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 GNAI1P63096 354 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 FAM184AQ8NB25 1140 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 RTF1Q92541 710 aaKnown RBP8.95□□□□□ -0.98
HDAC9-202ENST00000405010 RBM42Q9BTD8 480 aaKnown RBP8.95□□□□□ -0.98
HDAC9-202ENST00000405010 ERCC6Q03468 1493 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 NPM1P06748 294 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC9-202ENST00000405010 GAS2L2Q8NHY3 880 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 SMC3Q9UQE7 1217 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 VPS37CA5D8V6 355 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-202ENST00000405010 SOX12O15370 315 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 FIBPO43427 364 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 PRIM1P49642 420 aaKnown RBP8.95□□□□□ -0.98
HDAC9-202ENST00000405010 UHRF1BP1Q6BDS2 1440 aa8.95□□□□□ -0.98
HDAC9-202ENST00000405010 GAS2L3Q86XJ1 694 aa8.94□□□□□ -0.98
HDAC9-202ENST00000405010 PRAG1Q86YV5 1406 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms