RNA–Protein interactions for RNA: ENST00000403915.5

KCNS3-202, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-202ENST00000403915 ICE2Q659A1 982 aa11.5□□□□□ -0.57
KCNS3-202ENST00000403915 DHX16O60231 1041 aaKnown RBP11.49□□□□□ -0.57
KCNS3-202ENST00000403915 BECN1Q14457 450 aa11.49□□□□□ -0.57
KCNS3-202ENST00000403915 ANKRD23Q86SG2 305 aa11.49□□□□□ -0.57
KCNS3-202ENST00000403915 PIK3R5Q8WYR1 880 aa11.49□□□□□ -0.57
KCNS3-202ENST00000403915 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
KCNS3-202ENST00000403915 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
KCNS3-202ENST00000403915 BRMS1Q9HCU9 246 aa11.49□□□□□ -0.57
KCNS3-202ENST00000403915 NUP160Q12769 1436 aa11.48□□□□□ -0.57
KCNS3-202ENST00000403915 SLC26A8Q96RN1 970 aa11.48□□□□□ -0.57
KCNS3-202ENST00000403915 CCDC189A1A4V9 331 aa11.48□□□□□ -0.57
KCNS3-202ENST00000403915 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
KCNS3-202ENST00000403915 ZC3H12AQ5D1E8 599 aaKnown RBP11.48□□□□□ -0.57
KCNS3-202ENST00000403915 BIRC2Q13490 618 aa11.47□□□□□ -0.57
KCNS3-202ENST00000403915 NINLQ9Y2I6 1382 aa11.47□□□□□ -0.57
KCNS3-202ENST00000403915 CCDC173Q0VFZ6 552 aa11.47□□□□□ -0.57
KCNS3-202ENST00000403915 TMX1Q9H3N1 280 aa11.47□□□□□ -0.57
KCNS3-202ENST00000403915 TEX14Q8IWB6 1497 aa11.47□□□□□ -0.57
KCNS3-202ENST00000403915 LRCH2Q5VUJ6 765 aa11.46□□□□□ -0.57
KCNS3-202ENST00000403915 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
KCNS3-202ENST00000403915 SUFUQ9UMX1 484 aa11.46□□□□□ -0.57
KCNS3-202ENST00000403915 SLFN14P0C7P3 912 aa11.46□□□□□ -0.58
KCNS3-202ENST00000403915 XPCQ01831 940 aaPredicted RBP11.46□□□□□ -0.58
KCNS3-202ENST00000403915 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.58
KCNS3-202ENST00000403915 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.58
KCNS3-202ENST00000403915 SOGA1O94964 1423 aa11.45□□□□□ -0.58
KCNS3-202ENST00000403915 MNS1Q8NEH6 495 aa11.45□□□□□ -0.58
KCNS3-202ENST00000403915 MED4Q9NPJ6 270 aa11.45□□□□□ -0.58
KCNS3-202ENST00000403915 DHX57Q6P158 1386 aaKnown RBP11.45□□□□□ -0.58
KCNS3-202ENST00000403915 EXOC8Q8IYI6 725 aa11.45□□□□□ -0.58
KCNS3-202ENST00000403915 PPP1R9BQ96SB3 815 aa11.45□□□□□ -0.58
KCNS3-202ENST00000403915 NOL10Q9BSC4 688 aaKnown RBP11.45□□□□□ -0.58
KCNS3-202ENST00000403915 UPF2Q9HAU5 1272 aaKnown RBP11.45□□□□□ -0.58
KCNS3-202ENST00000403915 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
KCNS3-202ENST00000403915 PPP1R12AO14974 1030 aaPredicted RBP11.44□□□□□ -0.58
KCNS3-202ENST00000403915 MYRIPQ8NFW9 859 aa11.43□□□□□ -0.58
KCNS3-202ENST00000403915 PNISRQ8TF01 805 aaKnown RBP11.43□□□□□ -0.58
KCNS3-202ENST00000403915 PANK3Q9H999 370 aa11.43□□□□□ -0.58
KCNS3-202ENST00000403915 TOMM22Q9NS69 142 aa11.43□□□□□ -0.58
KCNS3-202ENST00000403915 RNF123Q5XPI4 1314 aa11.43□□□□□ -0.58
KCNS3-202ENST00000403915 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
KCNS3-202ENST00000403915 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
KCNS3-202ENST00000403915 KLHL33A6NCF5 533 aa11.42□□□□□ -0.58
KCNS3-202ENST00000403915 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
KCNS3-202ENST00000403915 TNPO1Q92973 898 aaKnown RBP11.42□□□□□ -0.58
KCNS3-202ENST00000403915 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
KCNS3-202ENST00000403915 ZBTB7CA1YPR0 619 aa11.42□□□□□ -0.58
KCNS3-202ENST00000403915 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
KCNS3-202ENST00000403915 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
KCNS3-202ENST00000403915 CXorf56Q9H5V9 222 aa11.42□□□□□ -0.58
KCNS3-202ENST00000403915 CCT2P78371 535 aaKnown RBP11.41□□□□□ -0.58
KCNS3-202ENST00000403915 PDCL2Q8N4E4 241 aa11.41□□□□□ -0.58
KCNS3-202ENST00000403915 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
KCNS3-202ENST00000403915 FEZ1Q99689 392 aa11.41□□□□□ -0.58
KCNS3-202ENST00000403915 PAIP2Q9BPZ3 127 aaKnown RBP11.41□□□□□ -0.58
KCNS3-202ENST00000403915 C1QTNF12Q5T7M4 302 aa11.41□□□□□ -0.58
KCNS3-202ENST00000403915 AKNAQ7Z591 1439 aa11.41□□□□□ -0.58
KCNS3-202ENST00000403915 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
KCNS3-202ENST00000403915 RASSF4Q9H2L5 321 aa11.41□□□□□ -0.58
KCNS3-202ENST00000403915 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.41□□□□□ -0.58
KCNS3-202ENST00000403915 TRAK2O60296 914 aa11.4□□□□□ -0.58
KCNS3-202ENST00000403915 SCP2P22307 547 aa11.4□□□□□ -0.58
KCNS3-202ENST00000403915 OGFRQ9NZT2 677 aa11.4□□□□□ -0.58
KCNS3-202ENST00000403915 NOL7Q9UMY1 257 aaKnown RBP11.4□□□□□ -0.58
KCNS3-202ENST00000403915 NRDCO43847 1150 aa11.39□□□□□ -0.59
KCNS3-202ENST00000403915 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.59
KCNS3-202ENST00000403915 HS1BP3Q53T59 392 aa11.39□□□□□ -0.59
KCNS3-202ENST00000403915 JMYQ8N9B5 988 aa11.39□□□□□ -0.59
KCNS3-202ENST00000403915 RBM5P52756 815 aaKnown RBP eCLIP11.39□□□□□ -0.59
KCNS3-202ENST00000403915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.39□□□□□ -0.59
KCNS3-202ENST00000403915 TSC1Q92574 1164 aa11.39□□□□□ -0.59
KCNS3-202ENST00000403915 JARID2Q92833 1246 aaPredicted RBP11.39□□□□□ -0.59
KCNS3-202ENST00000403915 CCDC97Q96F63 343 aaPredicted RBP11.39□□□□□ -0.59
KCNS3-202ENST00000403915 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 PLB1Q6P1J6 1458 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 MCM4P33991 863 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 PPRC1Q5VV67 1664 aaKnown RBP11.38□□□□□ -0.59
KCNS3-202ENST00000403915 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 ERICH4A6NGS2 130 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 COQ9O75208 318 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 RAD51AP2Q09MP3 1159 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 TERF2Q15554 542 aa11.38□□□□□ -0.59
KCNS3-202ENST00000403915 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
KCNS3-202ENST00000403915 KIF3CO14782 793 aa11.37□□□□□ -0.59
KCNS3-202ENST00000403915 GTF2F1P35269 517 aaKnown RBP eCLIP11.37□□□□□ -0.59
KCNS3-202ENST00000403915 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
KCNS3-202ENST00000403915 SLKQ9H2G2 1235 aaPredicted RBP11.37□□□□□ -0.59
KCNS3-202ENST00000403915 MYBPC2Q14324 1141 aa11.36□□□□□ -0.59
KCNS3-202ENST00000403915 SETDB1Q15047 1291 aa11.36□□□□□ -0.59
KCNS3-202ENST00000403915 PPP2R5AQ15172 486 aa11.36□□□□□ -0.59
KCNS3-202ENST00000403915 C11orf91Q3C1V1 193 aa11.36□□□□□ -0.59
KCNS3-202ENST00000403915 IPO7O95373 1038 aaKnown RBP11.36□□□□□ -0.59
KCNS3-202ENST00000403915 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
KCNS3-202ENST00000403915 GOLGA6CA6NDK9 693 aa11.35□□□□□ -0.59
KCNS3-202ENST00000403915 GOLGA6BA6NDN3 693 aa11.35□□□□□ -0.59
KCNS3-202ENST00000403915 CTAGE5O15320 804 aa11.35□□□□□ -0.59
KCNS3-202ENST00000403915 GOLGA6DP0CG33 693 aa11.35□□□□□ -0.59
KCNS3-202ENST00000403915 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
KCNS3-202ENST00000403915 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
KCNS3-202ENST00000403915 GOLGA6AQ9NYA3 693 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms