RNA–Protein interactions for RNA: ENST00000403714.7

EFR3B-204, Transcript of EFR3 homolog B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EFR3B, Length 7,434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-204ENST00000403714 KAT6BQ8WYB5 2073 aa13.15□□□□□ -0.3
EFR3B-204ENST00000403714 CCDC18Q5T9S5 1454 aa13.15□□□□□ -0.3
EFR3B-204ENST00000403714 RALBP1Q15311 655 aa13.15□□□□□ -0.3
EFR3B-204ENST00000403714 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
EFR3B-204ENST00000403714 EPS15P42566 896 aa13.14□□□□□ -0.31
EFR3B-204ENST00000403714 MATR3P43243 847 aaKnown RBP eCLIP13.14□□□□□ -0.31
EFR3B-204ENST00000403714 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
EFR3B-204ENST00000403714 AFAP1Q8N556 730 aa13.13□□□□□ -0.31
EFR3B-204ENST00000403714 RAPGEF3O95398 923 aa13.13□□□□□ -0.31
EFR3B-204ENST00000403714 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
EFR3B-204ENST00000403714 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
EFR3B-204ENST00000403714 SYAP1Q96A49 352 aaPredicted RBP13.12□□□□□ -0.31
EFR3B-204ENST00000403714 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
EFR3B-204ENST00000403714 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
EFR3B-204ENST00000403714 ST18O60284 1047 aa13.12□□□□□ -0.31
EFR3B-204ENST00000403714 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
EFR3B-204ENST00000403714 ZPR1O75312 459 aa13.12□□□□□ -0.31
EFR3B-204ENST00000403714 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
EFR3B-204ENST00000403714 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
EFR3B-204ENST00000403714 MPHOSPH8Q99549 860 aa13.11□□□□□ -0.31
EFR3B-204ENST00000403714 SIL1Q9H173 461 aa13.11□□□□□ -0.31
EFR3B-204ENST00000403714 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
EFR3B-204ENST00000403714 TTC16Q8NEE8 873 aa13.11□□□□□ -0.31
EFR3B-204ENST00000403714 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
EFR3B-204ENST00000403714 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
EFR3B-204ENST00000403714 TTC39AQ5SRH9 613 aa13.11□□□□□ -0.31
EFR3B-204ENST00000403714 PTCD1O75127 700 aaKnown RBP13.1□□□□□ -0.31
EFR3B-204ENST00000403714 GOLGA6L1Q8N7Z2 621 aa13.1□□□□□ -0.31
EFR3B-204ENST00000403714 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
EFR3B-204ENST00000403714 DHX57Q6P158 1386 aaKnown RBP13.1□□□□□ -0.31
EFR3B-204ENST00000403714 MTHFSP49914 203 aa13.09□□□□□ -0.31
EFR3B-204ENST00000403714 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
EFR3B-204ENST00000403714 RUFY2Q8WXA3 655 aa13.09□□□□□ -0.31
EFR3B-204ENST00000403714 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
EFR3B-204ENST00000403714 TPM1P09493 284 aa13.09□□□□□ -0.31
EFR3B-204ENST00000403714 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.31
EFR3B-204ENST00000403714 BECN2A8MW95 431 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 APAF1O14727 1248 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 PRAM1Q96QH2 718 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 MPRIPQ6WCQ1 1025 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 VTI1AQ96AJ9 217 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 E9PSI1 815 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
EFR3B-204ENST00000403714 SAFBQ15424 915 aaKnown RBP eCLIP13.07□□□□□ -0.32
EFR3B-204ENST00000403714 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
EFR3B-204ENST00000403714 C8orf37Q96NL8 207 aa13.07□□□□□ -0.32
EFR3B-204ENST00000403714 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
EFR3B-204ENST00000403714 TMOD2Q9NZR1 351 aa13.07□□□□□ -0.32
EFR3B-204ENST00000403714 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
EFR3B-204ENST00000403714 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
EFR3B-204ENST00000403714 CEBPAP49715 358 aaPredicted RBP13.07□□□□□ -0.32
EFR3B-204ENST00000403714 SMG6Q86US8 1419 aaKnown RBP13.07□□□□□ -0.32
EFR3B-204ENST00000403714 TRMT1LQ7Z2T5 733 aaKnown RBP13.06□□□□□ -0.32
EFR3B-204ENST00000403714 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
EFR3B-204ENST00000403714 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
EFR3B-204ENST00000403714 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
EFR3B-204ENST00000403714 USP5P45974 858 aa13.06□□□□□ -0.32
EFR3B-204ENST00000403714 UBTFL1P0CB47 393 aaPredicted RBP13.06□□□□□ -0.32
EFR3B-204ENST00000403714 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
EFR3B-204ENST00000403714 BRMS1Q9HCU9 246 aa13.05□□□□□ -0.32
EFR3B-204ENST00000403714 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
EFR3B-204ENST00000403714 ZNF644Q9H582 1327 aaPredicted RBP13.05□□□□□ -0.32
EFR3B-204ENST00000403714 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
EFR3B-204ENST00000403714 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
EFR3B-204ENST00000403714 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
EFR3B-204ENST00000403714 OFD1O75665 1012 aa13.04□□□□□ -0.32
EFR3B-204ENST00000403714 ZKSCAN2Q63HK3 967 aa13.04□□□□□ -0.32
EFR3B-204ENST00000403714 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
EFR3B-204ENST00000403714 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
EFR3B-204ENST00000403714 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
EFR3B-204ENST00000403714 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
EFR3B-204ENST00000403714 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
EFR3B-204ENST00000403714 TTLL5Q6EMB2 1281 aa13.03□□□□□ -0.32
EFR3B-204ENST00000403714 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
EFR3B-204ENST00000403714 IPO7O95373 1038 aaKnown RBP13.02□□□□□ -0.32
EFR3B-204ENST00000403714 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.32
EFR3B-204ENST00000403714 ZNF592Q92610 1267 aa13.02□□□□□ -0.32
EFR3B-204ENST00000403714 RAI14Q9P0K7 980 aa13.02□□□□□ -0.32
EFR3B-204ENST00000403714 ZNF76P36508 570 aa13.02□□□□□ -0.32
EFR3B-204ENST00000403714 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
EFR3B-204ENST00000403714 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.33
EFR3B-204ENST00000403714 ABCF2Q9UG63 623 aa13.02□□□□□ -0.33
EFR3B-204ENST00000403714 PDCL3Q9H2J4 239 aa13.02□□□□□ -0.33
EFR3B-204ENST00000403714 SLC4A8Q2Y0W8 1093 aa13.01□□□□□ -0.33
EFR3B-204ENST00000403714 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
EFR3B-204ENST00000403714 ARHGAP5Q13017 1502 aa13.01□□□□□ -0.33
EFR3B-204ENST00000403714 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
EFR3B-204ENST00000403714 AK7Q96M32 723 aa13.01□□□□□ -0.33
EFR3B-204ENST00000403714 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
EFR3B-204ENST00000403714 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
EFR3B-204ENST00000403714 CCDC158Q5M9N0 1113 aa13□□□□□ -0.33
EFR3B-204ENST00000403714 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
EFR3B-204ENST00000403714 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
EFR3B-204ENST00000403714 ACSBG1Q96GR2 724 aa13□□□□□ -0.33
EFR3B-204ENST00000403714 CRBNQ96SW2 442 aa13□□□□□ -0.33
EFR3B-204ENST00000403714 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
EFR3B-204ENST00000403714 XBP1P17861 261 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms